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Tan0020440 (gene) of Snake gourd v1 genome

Gene IDTan0020440
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSmall VCP/p97-interacting protein
Genome locationLG02:80627112..80629333
RNA-Seq ExpressionTan0020440
SyntenyTan0020440
Gene Ontology termsNA
InterPro domainsIPR031632 - Small VCP/p97-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020610.1 hypothetical protein SDJN02_17296 [Cucurbita argyrosperma subsp. argyrosperma]5.4e-2897.4Show/hide
Query:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSCLDE QKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
XP_008444542.1 PREDICTED: uncharacterized protein LOC103487833 [Cucumis melo]1.1e-2897.4Show/hide
Query:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSCLDEGQKQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSANTNKGEPVLKWSMG
Subjt:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
XP_022131511.1 uncharacterized protein LOC111004688 [Momordica charantia]4.5e-2792.21Show/hide
Query:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQC+ CLDEGQKQQR+EEERL+SVEAR+KAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTN+GEPVLKWSMG
Subjt:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
XP_022951067.1 uncharacterized protein LOC111454028 [Cucurbita moschata]5.4e-2897.4Show/hide
Query:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSCLDE QKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
XP_038886006.1 uncharacterized protein LOC120076314 [Benincasa hispida]2.4e-2896.1Show/hide
Query:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSCLDEG+KQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSANTNKGEPVLKWSMG
Subjt:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
TrEMBL top hitse value%identityAlignment
A0A1S3BAJ0 uncharacterized protein LOC1034878335.2e-2997.4Show/hide
Query:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSCLDEGQKQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSANTNKGEPVLKWSMG
Subjt:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
A0A6J1BPP8 uncharacterized protein LOC1110046882.2e-2792.21Show/hide
Query:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQC+ CLDEGQKQQR+EEERL+SVEAR+KAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTN+GEPVLKWSMG
Subjt:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
A0A6J1GGM5 uncharacterized protein LOC1114540282.6e-2897.4Show/hide
Query:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSCLDE QKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
A0A6J1K846 uncharacterized protein LOC1114920132.2e-2792.21Show/hide
Query:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQC SCLDEGQ+Q+RKEEERLASVEAR+KAAEAAQ+RQEEFEKSAAGRAARAQ+AANAKQSANTNKGEPVLKWSMG
Subjt:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
A0A6J1KLT2 uncharacterized protein LOC1114964242.6e-2897.4Show/hide
Query:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
        MGQCVSCLDE QKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63905.1 unknown protein1.0e-2176.71Show/hide
Query:  CVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSM
        C SC D  QK+QRKEEER AS EAR+KAAEAAQRR+E+F+KSAAGRAA+AQ+   AKQSANTNKGEPVLKW M
Subjt:  CVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAATGTGTAAGTTGCCTGGACGAGGGCCAAAAGCAGCAGAGAAAAGAAGAAGAAAGATTGGCCTCCGTTGAAGCTCGCTCCAAAGCTGCTGAAGCCGCTCAGAG
AAGGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGAGCAGCACGTGCTCAGATGGCAGCAAATGCAAAACAATCTGCTAACACTAACAAGGGAGAACCAGTTCTTAAGT
GGAGTATGGGCTGA
mRNA sequenceShow/hide mRNA sequence
AATTCACCAATTCGAGATTTTGGGAAAAACCTGCAACTGCAAGCAAAGCGATGGGGCAATGTGTAAGTTGCCTGGACGAGGGCCAAAAGCAGCAGAGAAAAGAAGAAGAA
AGATTGGCCTCCGTTGAAGCTCGCTCCAAAGCTGCTGAAGCCGCTCAGAGAAGGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGAGCAGCACGTGCTCAGATGGCAGC
AAATGCAAAACAATCTGCTAACACTAACAAGGGAGAACCAGTTCTTAAGTGGAGTATGGGCTGAGGTAGTGATCTATGGTCAGCTTCACTTCTTTTTTGCTTGTTAATAA
AAGGAAAAGATTGTGCATTTATCCGCATTCCTAGGATCCTCGTGTCCCAAGCAACTTGTCTATATTCCCAAGGTCTCCCAATGCAGAAGCTATCGAATGAAACCATGCTC
TTGTATTTGTTTATTCATGAATCAAGGAAAACAATAAGCGTGCGAACTTATATTCTTTGACACTTTACTTTCATGTAAATTTCACTCTCAACTTCTCATGCCTCAATTTA
CATTTTATCTGTATACAATTACTGTACAGAAACACATCTCTGACGATATCAATAACTAAGTTTCGAATTGGCATTTTCCTGAAATTGAACTTTCACATACAAATAAA
Protein sequenceShow/hide protein sequence
MGQCVSCLDEGQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANTNKGEPVLKWSMG