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Tan0020499 (gene) of Snake gourd v1 genome

Gene IDTan0020499
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAPO domain-containing protein
Genome locationLG09:67534282..67534872
RNA-Seq ExpressionTan0020499
SyntenyTan0020499
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035091.1 putative transmembrane protein [Cucumis melo var. makuwa]1.8e-2982.35Show/hide
Query:  MAGSQQVNA-AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        M GSQQVNA  + MKGPSPAQH+TEVLHQRKKLPV PMRMAIGGFA+ AT+GY VLYTKKKPEASALDVAKVT G+STP+NT PR
Subjt:  MAGSQQVNA-AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
KAE8126076.1 hypothetical protein FH972_020822 [Carpinus fangiana]6.5e-2779.07Show/hide
Query:  MAGSQQVNA--AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        MAG QQV A  AE MKGPSP QHSTEVLHQR+KLP  PMRMAIGGFA+ A +GYLVLY+KKKPEASA DVAKV VGVS PENT PR
Subjt:  MAGSQQVNA--AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
PQP98417.1 hypothetical protein Pyn_22000 [Prunus yedoensis var. nudiflora]1.6e-2574.71Show/hide
Query:  MAGSQQVNA---AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        MAG QQV A   A+GMKGPSPAQHSTEVLHQ  KL   PMRMA+GGFA++ TIGY  LYTKKKPEASALDVAKV  G S PENT PR
Subjt:  MAGSQQVNA---AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
PQP99204.1 hypothetical protein Pyn_32198 [Prunus yedoensis var. nudiflora]2.8e-2574.71Show/hide
Query:  MAGSQQVNA---AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        MAG QQV A   A+GMKGPSPAQHSTEVLHQ  KL   PMRMA+GGFA++ TIGY  LYTKKKPEASALDVAKV  G S PENT PR
Subjt:  MAGSQQVNA---AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
XP_022134574.1 uncharacterized protein LOC111006810 [Momordica charantia]3.6e-2576.19Show/hide
Query:  MAGSQQVNAAEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        MAGSQQ+N      GPSPAQH+TEVL QRKKLPV PM+MA+GGF + AT+GY VL TKKKPEASALDVAKVT GV+TPENTRPR
Subjt:  MAGSQQVNAAEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
TrEMBL top hitse value%identityAlignment
A0A314XVK0 Uncharacterized protein1.3e-2574.71Show/hide
Query:  MAGSQQVNA---AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        MAG QQV A   A+GMKGPSPAQHSTEVLHQ  KL   PMRMA+GGFA++ TIGY  LYTKKKPEASALDVAKV  G S PENT PR
Subjt:  MAGSQQVNA---AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
A0A314Y3C0 Uncharacterized protein7.8e-2674.71Show/hide
Query:  MAGSQQVNA---AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        MAG QQV A   A+GMKGPSPAQHSTEVLHQ  KL   PMRMA+GGFA++ TIGY  LYTKKKPEASALDVAKV  G S PENT PR
Subjt:  MAGSQQVNA---AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
A0A5D3BA37 Putative transmembrane protein8.9e-3082.35Show/hide
Query:  MAGSQQVNA-AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        M GSQQVNA  + MKGPSPAQH+TEVLHQRKKLPV PMRMAIGGFA+ AT+GY VLYTKKKPEASALDVAKVT G+STP+NT PR
Subjt:  MAGSQQVNA-AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
A0A5N6RUE0 Uncharacterized protein3.2e-2779.07Show/hide
Query:  MAGSQQVNA--AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        MAG QQV A  AE MKGPSP QHSTEVLHQR+KLP  PMRMAIGGFA+ A +GYLVLY+KKKPEASA DVAKV VGVS PENT PR
Subjt:  MAGSQQVNA--AEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
A0A6J1BZ44 uncharacterized protein LOC1110068101.7e-2576.19Show/hide
Query:  MAGSQQVNAAEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        MAGSQQ+N      GPSPAQH+TEVL QRKKLPV PM+MA+GGF + AT+GY VL TKKKPEASALDVAKVT GV+TPENTRPR
Subjt:  MAGSQQVNAAEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31830.1 unknown protein1.7e-1249.4Show/hide
Query:  SQQVNAA--EGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR
        S+ V AA  E  K P P  +   VLHQR+ LP S   MA+ G A+   I Y V+Y KKKPEA+A DVAK   G + PE+T PR
Subjt:  SQQVNAA--EGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGATCACAGCAAGTGAATGCCGCAGAGGGAATGAAGGGCCCGTCTCCGGCTCAGCACAGTACGGAGGTTCTTCACCAGCGAAAGAAATTGCCGGTTAGTCCGAT
GAGAATGGCGATCGGCGGTTTCGCCATGGTCGCGACGATCGGTTACTTGGTCCTGTACACGAAGAAGAAACCGGAGGCTTCCGCCCTTGATGTGGCGAAAGTCACCGTCG
GTGTGTCCACTCCGGAGAACACACGTCCTCGAATGTAG
mRNA sequenceShow/hide mRNA sequence
CTAGTTTCTAGGCATTGAAACGAACTTCAACTTCAACCTAAACCGCCATTCATCTGCAAACAACTTCCACTTGTTCAATATCTTCTCTACGTTTCCATCACCAATTCCCC
TTTTTCTTAGCCCTAATCCCAAATCTCGCAAACGAATTTCAGAGTTCCAGAATCGGCAATGGCAGGATCACAGCAAGTGAATGCCGCAGAGGGAATGAAGGGCCCGTCTC
CGGCTCAGCACAGTACGGAGGTTCTTCACCAGCGAAAGAAATTGCCGGTTAGTCCGATGAGAATGGCGATCGGCGGTTTCGCCATGGTCGCGACGATCGGTTACTTGGTC
CTGTACACGAAGAAGAAACCGGAGGCTTCCGCCCTTGATGTGGCGAAAGTCACCGTCGGTGTGTCCACTCCGGAGAACACACGTCCTCGAATGTAGAAATTTACCTTTGG
TTTAGTCGTCTTCTTCAAAAGAGTTATTTCGTTTGGTTTCTAATCTCTTTGTTATGATTATATTATGAATGATCGCTGCCTTTTGTTTTCTGTATTAAATCCAAAGACAA
ATAGCATTTTAAGTGCTCTCTATCAATAATCAATATCATAG
Protein sequenceShow/hide protein sequence
MAGSQQVNAAEGMKGPSPAQHSTEVLHQRKKLPVSPMRMAIGGFAMVATIGYLVLYTKKKPEASALDVAKVTVGVSTPENTRPRM