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Tan0020503 (gene) of Snake gourd v1 genome

Gene IDTan0020503
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPrecursor of CEP14
Genome locationLG07:53094545..53094856
RNA-Seq ExpressionTan0020503
SyntenyTan0020503
Gene Ontology termsGO:0006970 - response to osmotic stress (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
InterPro domainsIPR038930 - Precursor of CEP13/CEP14


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OIT29134.1 hypothetical protein A4A49_16180 [Nicotiana attenuata]7.2e-0436.89Show/hide
Query:  INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYN----NNNLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPG
        I+ S+ L+F L+L+S S S++ R  L LH+        + L    LPKG  P S+PS  GH    ++KL+      V            +RILRSVPSPG
Subjt:  INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYN----NNNLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPG

Query:  ANH
          H
Subjt:  ANH

OVA16140.1 hypothetical protein BVC80_8927g22 [Macleaya cordata]1.7e-0538.14Show/hide
Query:  FLIFFLLLSSISPSSQLRTTLLLHKKYNNNN--------LLSVV-------------LPKGDAPPSSPSNIGHVVLT-NQKLLR--SRSLIVAPHPRHYY
        F +  L+ SS+ PSS  R  LL  +K  NNN        +++VV             LPKG  PPS+PS  GH ++  N+KL R  + +    P P H  
Subjt:  FLIFFLLLSSISPSSQLRTTLLLHKKYNNNN--------LLSVV-------------LPKGDAPPSSPSNIGHVVLT-NQKLLR--SRSLIVAPHPRHYY

Query:  YYNNNRILRSVPSPGANH
            +RILRSVPSPG  H
Subjt:  YYNNNRILRSVPSPGANH

XP_002265506.1 PREDICTED: uncharacterized protein LOC100246308 [Vitis vinifera]6.5e-0535.85Show/hide
Query:  NKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNN--------NLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVP
        +K+L LI F++ SS  PS   R  L + +  +N         +L+   LPKG  P SSPS  GH ++ ++KL+     +V            +RILRSVP
Subjt:  NKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNN--------NLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVP

Query:  SPGANH
        SPG  H
Subjt:  SPGANH

XP_006358104.1 PREDICTED: uncharacterized protein LOC102597896 [Solanum tuberosum]4.2e-0438.24Show/hide
Query:  INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNNNLLSV---VLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPGA
        I+ S+ L+F L L+S S S + R  L  H+     NL S+    LPKG  P S+PS  GH   T++KL+      +            +RILRSVPSPG 
Subjt:  INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNNNLLSV---VLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPGA

Query:  NH
         H
Subjt:  NH

XP_015065205.1 precursor of CEP14 [Solanum pennellii]5.0e-0539.22Show/hide
Query:  INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNNNLLSV---VLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPGA
        I+ S+ L+F L+L+S S S + R  L  H+    +NL S+    LPKG  P S+PS  GH   T++KL+      V            +RILRSVPSPG 
Subjt:  INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNNNLLSV---VLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPGA

Query:  NH
         H
Subjt:  NH

TrEMBL top hitse value%identityAlignment
A0A200R0F1 Uncharacterized protein8.3e-0638.14Show/hide
Query:  FLIFFLLLSSISPSSQLRTTLLLHKKYNNNN--------LLSVV-------------LPKGDAPPSSPSNIGHVVLT-NQKLLR--SRSLIVAPHPRHYY
        F +  L+ SS+ PSS  R  LL  +K  NNN        +++VV             LPKG  PPS+PS  GH ++  N+KL R  + +    P P H  
Subjt:  FLIFFLLLSSISPSSQLRTTLLLHKKYNNNN--------LLSVV-------------LPKGDAPPSSPSNIGHVVLT-NQKLLR--SRSLIVAPHPRHYY

Query:  YYNNNRILRSVPSPGANH
            +RILRSVPSPG  H
Subjt:  YYNNNRILRSVPSPGANH

A0A314KK12 Uncharacterized protein3.5e-0436.89Show/hide
Query:  INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYN----NNNLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPG
        I+ S+ L+F L+L+S S S++ R  L LH+        + L    LPKG  P S+PS  GH    ++KL+      V            +RILRSVPSPG
Subjt:  INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYN----NNNLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPG

Query:  ANH
          H
Subjt:  ANH

A0A438HH69 Precursor of CEP143.2e-0535.85Show/hide
Query:  NKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNN--------NLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVP
        +K+L LI F++ SS  PS   R  L + +  +N         +L+   LPKG  P SSPS  GH ++ ++KL+     +V            +RILRSVP
Subjt:  NKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNN--------NLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVP

Query:  SPGANH
        SPG  H
Subjt:  SPGANH

A5BB23 Uncharacterized protein3.2e-0535.85Show/hide
Query:  NKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNN--------NLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVP
        +K+L LI F++ SS  PS   R  L + +  +N         +L+   LPKG  P SSPS  GH ++ ++KL+     +V            +RILRSVP
Subjt:  NKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNN--------NLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVP

Query:  SPGANH
        SPG  H
Subjt:  SPGANH

M1CRR9 Uncharacterized protein2.1e-0438.24Show/hide
Query:  INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNNNLLSV---VLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPGA
        I+ S+ L+F L L+S S S + R  L  H+     NL S+    LPKG  P S+PS  GH   T++KL+      +            +RILRSVPSPG 
Subjt:  INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNNNLLSV---VLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPGA

Query:  NH
         H
Subjt:  NH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16950.1 unknown protein3.5e-0434.58Show/hide
Query:  MATP-INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNNNLLSVVLPKGDAPPSSPSNIGHVVL---TNQKLLRSRSLIVAPHPRHYYYYNNNRILRSV
        MA P I+ S+  +  L++  +  SSQ R  L+ +    +  L    LPKG+ PPS PS+ GH      T+Q+++   S      P  Y      R L SV
Subjt:  MATP-INKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNNNLLSVVLPKGDAPPSSPSNIGHVVL---TNQKLLRSRSLIVAPHPRHYYYYNNNRILRSV

Query:  PSPGANH
        PSPG  H
Subjt:  PSPGANH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCCCAATTAACAAATCCCTATTTCTCATCTTCTTCCTTCTTCTTTCTTCCATTTCCCCATCTTCTCAATTAAGAACCACCCTTCTCCTTCACAAGAAATACAA
CAACAACAACCTCTTGTCGGTCGTCCTCCCCAAAGGCGACGCGCCACCGTCTTCTCCCAGCAATATAGGCCACGTTGTCCTCACCAACCAGAAGCTCCTCCGTAGTCGTA
GCCTCATTGTTGCCCCTCATCCCCGACATTATTACTACTATAACAACAATCGCATTCTCCGCTCCGTCCCTAGCCCCGGTGCCAACCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCCCAATTAACAAATCCCTATTTCTCATCTTCTTCCTTCTTCTTTCTTCCATTTCCCCATCTTCTCAATTAAGAACCACCCTTCTCCTTCACAAGAAATACAA
CAACAACAACCTCTTGTCGGTCGTCCTCCCCAAAGGCGACGCGCCACCGTCTTCTCCCAGCAATATAGGCCACGTTGTCCTCACCAACCAGAAGCTCCTCCGTAGTCGTA
GCCTCATTGTTGCCCCTCATCCCCGACATTATTACTACTATAACAACAATCGCATTCTCCGCTCCGTCCCTAGCCCCGGTGCCAACCATTAA
Protein sequenceShow/hide protein sequence
MATPINKSLFLIFFLLLSSISPSSQLRTTLLLHKKYNNNNLLSVVLPKGDAPPSSPSNIGHVVLTNQKLLRSRSLIVAPHPRHYYYYNNNRILRSVPSPGANH