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Tan0020513 (gene) of Snake gourd v1 genome

Gene IDTan0020513
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotodermal factor 1-like isoform X1
Genome locationLG05:38642026..38643102
RNA-Seq ExpressionTan0020513
SyntenyTan0020513
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589294.1 Protodermal factor 1, partial [Cucurbita argyrosperma subsp. sororia]6.1e-1286.67Show/hide
Query:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP
        SS GSP YGT PPP GSGGSHGGKPPSHGHGGKK SPKPG CGNP
Subjt:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP

XP_022989188.1 leucine-rich repeat extensin-like protein 5 isoform X2 [Cucurbita maxima]6.1e-1286.67Show/hide
Query:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP
        SS GSP YGT PPP GSGGSHGGKPPSHGHGGKK SPKPG CGNP
Subjt:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP

XP_023530945.1 protodermal factor 1-like isoform X1 [Cucurbita pepo subsp. pepo]6.1e-1286.67Show/hide
Query:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP
        SS GSP YGT PPP GSGGSHGGKPPSHGHGGKK SPKPG CGNP
Subjt:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP

XP_023530946.1 protodermal factor 1-like isoform X2 [Cucurbita pepo subsp. pepo]6.1e-1286.67Show/hide
Query:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP
        SS GSP YGT PPP GSGGSHGGKPPSHGHGGKK SPKPG CGNP
Subjt:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP

XP_038888912.1 protodermal factor 1-like [Benincasa hispida]4.7e-1290.91Show/hide
Query:  SQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP
        SQGSP YGT PPP GSGGSHGGKPPSHGHGGKKH+PKPGKCGNP
Subjt:  SQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP

TrEMBL top hitse value%identityAlignment
A0A6J1ER90 protodermal factor 1-like isoform X46.6e-1284.44Show/hide
Query:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP
        SS GSP YGT PPP GSGGSHGGKPP+HGHGGKK SPKPG CGNP
Subjt:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP

A0A6J1ES52 protodermal factor 1-like isoform X16.6e-1284.44Show/hide
Query:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP
        SS GSP YGT PPP GSGGSHGGKPP+HGHGGKK SPKPG CGNP
Subjt:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP

A0A6J1JF43 protodermal factor 1-like isoform X12.9e-1286.67Show/hide
Query:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP
        SS GSP YGT PPP GSGGSHGGKPPSHGHGGKK SPKPG CGNP
Subjt:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP

A0A6J1JNN6 protodermal factor 1-like isoform X32.9e-1286.67Show/hide
Query:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP
        SS GSP YGT PPP GSGGSHGGKPPSHGHGGKK SPKPG CGNP
Subjt:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP

A0A6J1JPJ4 leucine-rich repeat extensin-like protein 5 isoform X22.9e-1286.67Show/hide
Query:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP
        SS GSP YGT PPP GSGGSHGGKPPSHGHGGKK SPKPG CGNP
Subjt:  SSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGTTCGCAAGGGAGTCCATCTTATGGGACTATACCACCACCATATGGTTCGGGAGGAAGCCATGGAGGAAAACCACCTTCTCATGGACATGGTGGTAAAAAACA
CAGTCCAAAACCAGGGAAATGCGGAAACCCGGTTACCTCTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAGTTCGCAAGGGAGTCCATCTTATGGGACTATACCACCACCATATGGTTCGGGAGGAAGCCATGGAGGAAAACCACCTTCTCATGGACATGGTGGTAAAAAACA
CAGTCCAAAACCAGGGAAATGCGGAAACCCGGTTACCTCTTATTAG
Protein sequenceShow/hide protein sequence
MDSSQGSPSYGTIPPPYGSGGSHGGKPPSHGHGGKKHSPKPGKCGNPVTSY