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Tan0020515 (gene) of Snake gourd v1 genome

Gene IDTan0020515
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNuclear transcription factor Y subunit B-3
Genome locationLG05:8166852..8167730
RNA-Seq ExpressionTan0020515
SyntenyTan0020515
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464163.1 PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]1.2e-7776.5Show/hide
Query:  MKLKIKVEDQMAD-LSLRNPLSWFISLTFFLLCLGFLGFR-FSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQEEEE-----KEVTFVSDR-----KS
        MKLKIKVE+QMA+   LR PLSWF+ LTFFL CLGFLGFR FSSFL TSIALIMSM+YFSISKR+SLPI KFV ++EEE     KE+TF SD       S
Subjt:  MKLKIKVEDQMAD-LSLRNPLSWFISLTFFLLCLGFLGFR-FSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQEEEE-----KEVTFVSDR-----KS

Query:  SPTTGDLLSESECADDNFTTTEESEVEWP-------TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDD-DEEEEEDDMSFRYEKLSDFQKQKMNLV
        +PTT DLLSESECADDNFTTTEESEVEWP        A++P RSDDGSISDEESLIEIALPTGHYVS KFDD DE+E+EDD  FRY+KLSDFQK+  NLV
Subjt:  SPTTGDLLSESECADDNFTTTEESEVEWP-------TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDD-DEEEEEDDMSFRYEKLSDFQKQKMNLV

Query:  ELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        E+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_011656887.2 uncharacterized protein LOC105435780 [Cucumis sativus]4.3e-7575.21Show/hide
Query:  MKLKIKVEDQMAD-LSLRNPLSWFISLTFFLLCLGFLGFR-FSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQEEEE------KEVTFVSDR-----K
        MKLKIKVE+QMA+ L LR P SW I LTFFLLCLGF GFR FSSFL TSIALIMSM+YFSISKRNSLPI KFV +EEEE      K++TF SD       
Subjt:  MKLKIKVEDQMAD-LSLRNPLSWFISLTFFLLCLGFLGFR-FSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQEEEE------KEVTFVSDR-----K

Query:  SSPTTGDLLSESECADDNFTTTEESEVEWP-------TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQKQKMNLV
        S+PT  DLLSESECADDNFTTTEESEVEWP         +NP RSDDGSISDEESLIEIALPTGHYVS KF DD +E+EDD+SFRY+KL+DFQ++  NLV
Subjt:  SSPTTGDLLSESECADDNFTTTEESEVEWP-------TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQKQKMNLV

Query:  ELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        E+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_022140584.1 uncharacterized protein LOC111011203 [Momordica charantia]1.3e-7678.45Show/hide
Query:  MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGFRFSS-FLLTSIALIMSMVYFSISKRNSL------PIDKFVLQEEE--EKEVTFVSDRK---S
        MKLKI+VEDQMA   LRNPLSWF   +F LLCLGFLG RFSS F LTS  LIMSM+YF+ISKRNSL      PI+KFV +EEE  E EV+F SD+K   +
Subjt:  MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGFRFSS-FLLTSIALIMSMVYFSISKRNSL------PIDKFVLQEEE--EKEVTFVSDRK---S

Query:  SPTTGDLLSESECADDNFTTTEESEVEWP-----TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEE-EEEDDMSFRYEKLSDFQKQKMNLVEL
        S  TGDLLSESECADDNFTTTEESEVEWP     TA NPDRS DGSISDEESLIEIALPTGHYVSHKFDDDEE E+EDDMSF  +KLSDFQKQK NLVEL
Subjt:  SPTTGDLLSESECADDNFTTTEESEVEWP-----TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEE-EEEDDMSFRYEKLSDFQKQKMNLVEL

Query:  LAEINDINEEENLIEIDISMGSIKYSRFEIEA
        LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  LAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_022943897.1 uncharacterized protein LOC111448485 [Cucurbita moschata]1.3e-6871.74Show/hide
Query:  MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGF--RFSSFLLTSIALIMSMVYFSISKRNSLPIDKFV--LQEEEEKEVTFVSD-----RKSSPT
        MKLKI  EDQMA   ++NPLS FI LTFFLL LGFLGF   FSSF+LT  ALIMSM+YFSISK N  P+ K +   Q++E+KE+TF+S        +S  
Subjt:  MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGF--RFSSFLLTSIALIMSMVYFSISKRNSLPIDKFV--LQEEEEKEVTFVSD-----RKSSPT

Query:  TGDLLSESECADDNFTTTEESEVEWP-----TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQ--KQKMNLVELLA
        T DLLSESECADDNFTTTEESEVEWP     TA N  RSDDGSISDEESLIEIALPTGHYVSHK DDD++++EDDMSF ++KLS+FQ  K+K NLVELLA
Subjt:  TGDLLSESECADDNFTTTEESEVEWP-----TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQ--KQKMNLVELLA

Query:  EINDINEEENLIEIDISMGSIKYSRFEIEA
        EINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  EINDINEEENLIEIDISMGSIKYSRFEIEA

XP_038902685.1 uncharacterized protein LOC120089322 [Benincasa hispida]9.2e-7879.09Show/hide
Query:  LSLRNPLSWFISLTFFLLCLGFLGFR-FSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQ------EEEEKEVTFVSDR-----KSSPTTGDLLSESEC
        L LR PLSWFI+LTFFLLCLGFLGFR FSSFLLTSIALIMSM+YFSISKRNSLPI KFV Q      EE++K++TF SD       S+PTTGDLLSESEC
Subjt:  LSLRNPLSWFISLTFFLLCLGFLGFR-FSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQ------EEEEKEVTFVSDR-----KSSPTTGDLLSESEC

Query:  ADDNFTTTEESEVEWP-------TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQKQKMNLVELLAEINDINEEEN
        ADDNFTTTEESEVEWP          NPDRSDDGSISDEESLIEIALPTGHYVSHKFDD ++E+ED MSFRY+KLSDFQK+  NLVE+LAEINDINEEEN
Subjt:  ADDNFTTTEESEVEWP-------TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQKQKMNLVELLAEINDINEEEN

Query:  LIEIDISMGSIKYSRFEIEA
        LIEIDISMGSIKYSRFEIEA
Subjt:  LIEIDISMGSIKYSRFEIEA

TrEMBL top hitse value%identityAlignment
A0A1S3CMD0 uncharacterized protein LOC1035021115.8e-7876.5Show/hide
Query:  MKLKIKVEDQMAD-LSLRNPLSWFISLTFFLLCLGFLGFR-FSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQEEEE-----KEVTFVSDR-----KS
        MKLKIKVE+QMA+   LR PLSWF+ LTFFL CLGFLGFR FSSFL TSIALIMSM+YFSISKR+SLPI KFV ++EEE     KE+TF SD       S
Subjt:  MKLKIKVEDQMAD-LSLRNPLSWFISLTFFLLCLGFLGFR-FSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQEEEE-----KEVTFVSDR-----KS

Query:  SPTTGDLLSESECADDNFTTTEESEVEWP-------TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDD-DEEEEEDDMSFRYEKLSDFQKQKMNLV
        +PTT DLLSESECADDNFTTTEESEVEWP        A++P RSDDGSISDEESLIEIALPTGHYVS KFDD DE+E+EDD  FRY+KLSDFQK+  NLV
Subjt:  SPTTGDLLSESECADDNFTTTEESEVEWP-------TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDD-DEEEEEDDMSFRYEKLSDFQKQKMNLV

Query:  ELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        E+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5D3CJH9 Uncharacterized protein3.9e-5875.69Show/hide
Query:  MSMVYFSISKRNSLPIDKFVLQEEEE-----KEVTFVSDR-----KSSPTTGDLLSESECADDNFTTTEESEVEWP-------TAKNPDRSDDGSISDEE
        MSM+YFSISKR+SLPI KFV ++EEE     KE+TF SD       S+PTT DLLSESECADDNFTTTEESEVEWP        A++P RSDDGSISDEE
Subjt:  MSMVYFSISKRNSLPIDKFVLQEEEE-----KEVTFVSDR-----KSSPTTGDLLSESECADDNFTTTEESEVEWP-------TAKNPDRSDDGSISDEE

Query:  SLIEIALPTGHYVSHKFDD-DEEEEEDDMSFRYEKLSDFQKQKMNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVS KFDD DE+E+EDD  FRY+KLSDFQK+  NLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSHKFDD-DEEEEEDDMSFRYEKLSDFQKQKMNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A6J1CG35 uncharacterized protein LOC1110112036.4e-7778.45Show/hide
Query:  MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGFRFSS-FLLTSIALIMSMVYFSISKRNSL------PIDKFVLQEEE--EKEVTFVSDRK---S
        MKLKI+VEDQMA   LRNPLSWF   +F LLCLGFLG RFSS F LTS  LIMSM+YF+ISKRNSL      PI+KFV +EEE  E EV+F SD+K   +
Subjt:  MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGFRFSS-FLLTSIALIMSMVYFSISKRNSL------PIDKFVLQEEE--EKEVTFVSDRK---S

Query:  SPTTGDLLSESECADDNFTTTEESEVEWP-----TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEE-EEEDDMSFRYEKLSDFQKQKMNLVEL
        S  TGDLLSESECADDNFTTTEESEVEWP     TA NPDRS DGSISDEESLIEIALPTGHYVSHKFDDDEE E+EDDMSF  +KLSDFQKQK NLVEL
Subjt:  SPTTGDLLSESECADDNFTTTEESEVEWP-----TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEE-EEEDDMSFRYEKLSDFQKQKMNLVEL

Query:  LAEINDINEEENLIEIDISMGSIKYSRFEIEA
        LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  LAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A6J1FUA8 uncharacterized protein LOC1114484856.5e-6971.74Show/hide
Query:  MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGF--RFSSFLLTSIALIMSMVYFSISKRNSLPIDKFV--LQEEEEKEVTFVSD-----RKSSPT
        MKLKI  EDQMA   ++NPLS FI LTFFLL LGFLGF   FSSF+LT  ALIMSM+YFSISK N  P+ K +   Q++E+KE+TF+S        +S  
Subjt:  MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGF--RFSSFLLTSIALIMSMVYFSISKRNSLPIDKFV--LQEEEEKEVTFVSD-----RKSSPT

Query:  TGDLLSESECADDNFTTTEESEVEWP-----TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQ--KQKMNLVELLA
        T DLLSESECADDNFTTTEESEVEWP     TA N  RSDDGSISDEESLIEIALPTGHYVSHK DDD++++EDDMSF ++KLS+FQ  K+K NLVELLA
Subjt:  TGDLLSESECADDNFTTTEESEVEWP-----TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQ--KQKMNLVELLA

Query:  EINDINEEENLIEIDISMGSIKYSRFEIEA
        EINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  EINDINEEENLIEIDISMGSIKYSRFEIEA

A0A6J1JE34 uncharacterized protein LOC1114836943.5e-6772.17Show/hide
Query:  MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGF--RFSSFLLTSIALIMSMVYFSISKRNSLPIDKFV--LQEEEEKEVTFVSD-----RKSSPT
        MKLKI  EDQMA   L+NPLS FI LTFFLL L FLGF   FSSFLLT  ALIMSM+YFSISK N  P+ K +   Q+EE+KE+TF+S        +S  
Subjt:  MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGF--RFSSFLLTSIALIMSMVYFSISKRNSLPIDKFV--LQEEEEKEVTFVSD-----RKSSPT

Query:  TGDLLSESECADDNFTTTEESEVEWP-----TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQ--KQKMNLVELLA
        T DLLSESECADDNFTTTEESEVEWP     TAKN  RSDDGSISDEESLIEIALPTGHYV+HK DDD  +++DDMSF ++KLS+FQ  K+K NLVELLA
Subjt:  TGDLLSESECADDNFTTTEESEVEWP-----TAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQ--KQKMNLVELLA

Query:  EINDINEEENLIEIDISMGSIKYSRFEIEA
        EINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  EINDINEEENLIEIDISMGSIKYSRFEIEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04480.1 unknown protein3.2e-2038.05Show/hide
Query:  MADLSLRNPLSWFISLTFFLLCLGFLGFRFSSFLLTSIALIMSMVYFSIS-KRNSLPIDKFVLQEEEEKEVTFVSDRKSSPTTGDLLSESECADDNFTTT
        +A + L+ P SW   L   LL +  LG RF   LLT  AL  S  +F IS   +S+   K    +++++E  +++       T D+  +SE   +N   T
Subjt:  MADLSLRNPLSWFISLTFFLLCLGFLGFRFSSFLLTSIALIMSMVYFSIS-KRNSLPIDKFVLQEEEEKEVTFVSDRKSSPTTGDLLSESECADDNFTTT

Query:  EESEVEWPTAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQKQKMNLVELLAEINDINEEENLIEIDISMGSIKYSR
         E +            DDG+I D+ESLIE++LP+GHY+ H ++ ++        + + K+ DF+     L +LL EIND  EE+NLIEIDIS+GSIKYSR
Subjt:  EESEVEWPTAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQKQKMNLVELLAEINDINEEENLIEIDISMGSIKYSR

Query:  FEIEA
        FEI+A
Subjt:  FEIEA

AT5G35870.1 unknown protein2.0e-1437.31Show/hide
Query:  LSLRNPLSWFISLTFFLLCLGFLGFRFSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQEEEEKEVTFVSDRKSSPTTGDLLSESECADDNFTTTEESE
        L  + P+SW   L   LL +  +G  FS  +LTS AL  S  +F +S           +Q+   K    V D        D L E+E +    TTT +  
Subjt:  LSLRNPLSWFISLTFFLLCLGFLGFRFSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQEEEEKEVTFVSDRKSSPTTGDLLSESECADDNFTTTEESE

Query:  VEWPTAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQKQKMNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIE
              KN D  DDG+I DEESLIE++LP+GHY+ H +     ++  D    Y  + DF+     L++L AE     E++NLIEIDIS+GSIK SRF+I+
Subjt:  VEWPTAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQKQKMNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIE

Query:  A
        A
Subjt:  A


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGAAAATCAAAGTTGAGGATCAAATGGCTGATCTTTCTTTGAGAAACCCATTATCATGGTTCATTTCTCTCACTTTTTTTCTCCTCTGTTTGGGTTTTTTGGG
GTTTAGATTCTCATCTTTTTTACTTACTTCAATAGCTCTGATTATGTCTATGGTTTATTTTTCAATCTCAAAAAGAAATTCACTTCCAATTGACAAATTTGTTCTTCAAG
AAGAAGAAGAAAAAGAAGTGACTTTTGTCTCTGACCGGAAATCCTCGCCCACGACCGGAGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAG
GAATCTGAAGTGGAGTGGCCGACTGCGAAAAACCCCGACCGGTCCGACGACGGTTCGATTTCCGACGAGGAAAGTTTGATAGAAATCGCTCTCCCGACCGGACATTACGT
CAGCCACAAATTCGACGACGACGAGGAAGAAGAAGAAGACGACATGTCGTTTCGTTACGAGAAACTGTCGGATTTTCAAAAGCAGAAGATGAATCTTGTGGAGCTATTGG
CTGAAATTAACGACATCAACGAGGAGGAGAATTTGATCGAGATCGACATATCCATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATTTTTTACAAATTTTCAATAAAGGTTGAGCCTTTTTTTCTTTTAATCTTTCTTTATTTCAATTTCTACTGTTGTTTCCAAGCCTTTGATAGCGAAAAAGTTTGACTTCT
TTTTTTTTAACTTTACTATTTTTGAAGACAATTGATTACACTAAGCCTTTCCCTTTTCTTTTTTGGATCTATGAAGTTGAAAATCAAAGTTGAGGATCAAATGGCTGATC
TTTCTTTGAGAAACCCATTATCATGGTTCATTTCTCTCACTTTTTTTCTCCTCTGTTTGGGTTTTTTGGGGTTTAGATTCTCATCTTTTTTACTTACTTCAATAGCTCTG
ATTATGTCTATGGTTTATTTTTCAATCTCAAAAAGAAATTCACTTCCAATTGACAAATTTGTTCTTCAAGAAGAAGAAGAAAAAGAAGTGACTTTTGTCTCTGACCGGAA
ATCCTCGCCCACGACCGGAGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGACTGCGAAAAACCCCGACC
GGTCCGACGACGGTTCGATTTCCGACGAGGAAAGTTTGATAGAAATCGCTCTCCCGACCGGACATTACGTCAGCCACAAATTCGACGACGACGAGGAAGAAGAAGAAGAC
GACATGTCGTTTCGTTACGAGAAACTGTCGGATTTTCAAAAGCAGAAGATGAATCTTGTGGAGCTATTGGCTGAAATTAACGACATCAACGAGGAGGAGAATTTGATCGA
GATCGACATATCCATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAAAATAAATTTTAAATACACAAAAATAAAACCAGGAGTAATTTTGGAGATTTACTG
Protein sequenceShow/hide protein sequence
MKLKIKVEDQMADLSLRNPLSWFISLTFFLLCLGFLGFRFSSFLLTSIALIMSMVYFSISKRNSLPIDKFVLQEEEEKEVTFVSDRKSSPTTGDLLSESECADDNFTTTE
ESEVEWPTAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDDEEEEEDDMSFRYEKLSDFQKQKMNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA