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Tan0020537 (gene) of Snake gourd v1 genome

Gene IDTan0020537
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationLG06:63068434..63069798
RNA-Seq ExpressionTan0020537
SyntenyTan0020537
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019172756.1 PREDICTED: uncharacterized protein LOC109168170 [Ipomoea nil]1.2e-1774.65Show/hide
Query:  QAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS
        Q+Q SNSGMSL++IVK LANNT QFQQETR  +Q L NQ++QLATSVSKLEAQ SGKLP Q EVNP ENV+
Subjt:  QAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS

XP_019198426.1 PREDICTED: uncharacterized protein LOC109192308 [Ipomoea nil]4.4e-1774.65Show/hide
Query:  QAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS
        Q Q SNSGMSL++IVK LANNT QFQ+ETR  +Q L NQI+QLATSVSKLEAQ SGKLP Q EVNP ENV+
Subjt:  QAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS

XP_022156327.1 uncharacterized protein LOC111023248 [Momordica charantia]8.1e-1980Show/hide
Query:  MQAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMEN
        MQ Q SNSGMSLE+IVK LAN+TLQFQQETRVGMQNL NQITQLATS+S+LEAQ+SG LP Q EVNP  N
Subjt:  MQAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMEN

XP_031091054.1 uncharacterized protein LOC115996048 [Ipomoea triloba]2.6e-1776.06Show/hide
Query:  QAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS
        Q Q SNSGM+L++IVK LANNT QFQQETR G+Q L NQI+QLATSV KLEAQ S KLPLQ EVNP ENVS
Subjt:  QAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS

XP_031112037.1 uncharacterized protein LOC116016008 [Ipomoea triloba]4.4e-1776.06Show/hide
Query:  QAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS
        Q Q SNSGMSL++IVK LANNT QF QETR G+Q L NQI+QLATSVSKLEAQ S KLP Q EVNP ENVS
Subjt:  QAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS

TrEMBL top hitse value%identityAlignment
A0A0J8BAH8 Retrotrans_gag domain-containing protein1.3e-1461.11Show/hide
Query:  MQAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS
        +Q Q  + GMSLED+V T+A++TLQFQQETR G+QNL+NQ++QLA +V +L+A +S KLP QPE NP EN S
Subjt:  MQAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS

A0A0K9QKB3 Retrotrans_gag domain-containing protein (Fragment)1.8e-1667.14Show/hide
Query:  QNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVSQ
        Q  + GMSLE+IVKT+ANNT+QFQQE R G++NL+NQ++QLA +V KL+AQNS KLP QPE NP ENVS+
Subjt:  QNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVSQ

A0A1U7YY93 uncharacterized protein LOC1045883491.5e-1569.57Show/hide
Query:  QNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS
        QNS+SGMSLEDIVK+LA  TLQFQ ETR  +Q LDNQ+ Q+AT++S+LEAQ+SGKLP Q  V P ENVS
Subjt:  QNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS

A0A6J1DRS5 uncharacterized protein LOC1110232483.9e-1980Show/hide
Query:  MQAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMEN
        MQ Q SNSGMSLE+IVK LAN+TLQFQQETRVGMQNL NQITQLATS+S+LEAQ+SG LP Q EVNP  N
Subjt:  MQAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMEN

A0A7J0FIA0 Uncharacterized protein9.0e-1667.14Show/hide
Query:  AQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS
        +Q SNSGMSLEDIVK+LA NT+QFQQET+  +Q+L+NQ+ Q+AT++S+LEAQ SGKLP Q  VNP EN S
Subjt:  AQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCCCAGAATTCCAACTCAGGTATGTCTTTGGAAGATATTGTTAAGACCCTAGCTAACAATACTCTTCAATTTCAACAGGAGACAAGAGTAGGCATGCAAAATTT
AGATAACCAAATTACTCAATTGGCTACGTCAGTTAGTAAGTTGGAAGCCCAAAATTCTGGAAAGTTGCCTTTACAACCAGAGGTGAATCCAATGGAGAACGTCTCACAAT
GGAACGAGAAGAGAAGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCCCAGAATTCCAACTCAGGTATGTCTTTGGAAGATATTGTTAAGACCCTAGCTAACAATACTCTTCAATTTCAACAGGAGACAAGAGTAGGCATGCAAAATTT
AGATAACCAAATTACTCAATTGGCTACGTCAGTTAGTAAGTTGGAAGCCCAAAATTCTGGAAAGTTGCCTTTACAACCAGAGGTGAATCCAATGGAGAACGTCTCACAAT
GGAACGAGAAGAGAAGTTGGTGA
Protein sequenceShow/hide protein sequence
MQAQNSNSGMSLEDIVKTLANNTLQFQQETRVGMQNLDNQITQLATSVSKLEAQNSGKLPLQPEVNPMENVSQWNEKRSW