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Tan0020540 (gene) of Snake gourd v1 genome

Gene IDTan0020540
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHydantoin utilization protein B
Genome locationLG03:77146215..77147022
RNA-Seq ExpressionTan0020540
SyntenyTan0020540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49101.1 hypothetical protein Csa_003514 [Cucumis sativus]1.8e-3054.37Show/hide
Query:  KPLLKVEPHNSGCDFSSNTLYAMGHENLDATVCSTRRPCLANSMSEFPRTVTRRSGNGAVGVDWRDFLPLELRKSKVREQIWGKRGNMGVRVGARPLRV-
        K  ++ EPHNSGCDFSSNTLYAM  ENLD TVCSTR PCL NSMSEFPRTVTRRSG  AVGVDW D         K R   W ++ N  VRV ARPL   
Subjt:  KPLLKVEPHNSGCDFSSNTLYAMGHENLDATVCSTRRPCLANSMSEFPRTVTRRSGNGAVGVDWRDFLPLELRKSKVREQIWGKRGNMGVRVGARPLRV-

Query:  --SNGRIFSENGHWQKR----------IMAELDFMHPVCPNVGNLSKADPNPLILLDDHS
          SN RIFSE   WQK+          IMAELD        +  +        ILLDDHS
Subjt:  --SNGRIFSENGHWQKR----------IMAELDFMHPVCPNVGNLSKADPNPLILLDDHS
TYK13037.1 Hydantoin utilization protein B [Cucumis melo var. makuwa]3.5e-2146.25Show/hide
Query:  KPLLKVEPHNSGCDFSSNTLYAMGHENLDATVCSTRRPCLANSMSEFPRTVTRRSGNGAVGVDWRDFLPLELRKSKVREQIWGKRGNMGVRVGARPL---
        K  ++ EPHN GCDFSSN LYA   ENLD TVCSTR PCL NSMSEFPRT TR +                          WG++ N+GVRV ARPL   
Subjt:  KPLLKVEPHNSGCDFSSNTLYAMGHENLDATVCSTRRPCLANSMSEFPRTVTRRSGNGAVGVDWRDFLPLELRKSKVREQIWGKRGNMGVRVGARPL---

Query:  RVSNGRIFSENGHWQKR----------IMAELDFMHPVCPNVGNLSKADPNPLILLDDHS
        R SN RIFSE   WQK+          IMAELD        +  +        ILLDDHS
Subjt:  RVSNGRIFSENGHWQKR----------IMAELDFMHPVCPNVGNLSKADPNPLILLDDHS
TrEMBL top hitse value%identityAlignment
A0A0A0KN07 Hydantoin utilization protein B8.9e-3154.37Show/hide
Query:  KPLLKVEPHNSGCDFSSNTLYAMGHENLDATVCSTRRPCLANSMSEFPRTVTRRSGNGAVGVDWRDFLPLELRKSKVREQIWGKRGNMGVRVGARPLRV-
        K  ++ EPHNSGCDFSSNTLYAM  ENLD TVCSTR PCL NSMSEFPRTVTRRSG  AVGVDW D         K R   W ++ N  VRV ARPL   
Subjt:  KPLLKVEPHNSGCDFSSNTLYAMGHENLDATVCSTRRPCLANSMSEFPRTVTRRSGNGAVGVDWRDFLPLELRKSKVREQIWGKRGNMGVRVGARPLRV-

Query:  --SNGRIFSENGHWQKR----------IMAELDFMHPVCPNVGNLSKADPNPLILLDDHS
          SN RIFSE   WQK+          IMAELD        +  +        ILLDDHS
Subjt:  --SNGRIFSENGHWQKR----------IMAELDFMHPVCPNVGNLSKADPNPLILLDDHS
A0A5D3CM64 Hydantoin utilization protein B1.7e-2146.25Show/hide
Query:  KPLLKVEPHNSGCDFSSNTLYAMGHENLDATVCSTRRPCLANSMSEFPRTVTRRSGNGAVGVDWRDFLPLELRKSKVREQIWGKRGNMGVRVGARPL---
        K  ++ EPHN GCDFSSN LYA   ENLD TVCSTR PCL NSMSEFPRT TR +                          WG++ N+GVRV ARPL   
Subjt:  KPLLKVEPHNSGCDFSSNTLYAMGHENLDATVCSTRRPCLANSMSEFPRTVTRRSGNGAVGVDWRDFLPLELRKSKVREQIWGKRGNMGVRVGARPL---

Query:  RVSNGRIFSENGHWQKR----------IMAELDFMHPVCPNVGNLSKADPNPLILLDDHS
        R SN RIFSE   WQK+          IMAELD        +  +        ILLDDHS
Subjt:  RVSNGRIFSENGHWQKR----------IMAELDFMHPVCPNVGNLSKADPNPLILLDDHS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAGCAGTGCATGTCCTTAAGGAAACATACCAAAAGCCCCTCTTGAAAGTGGAACCTCATAATTCCGGTTGCGACTTTTCGTCGAACACCTTATACGCAATGGG
CCATGAAAACCTCGACGCAACCGTGTGTTCGACACGCAGACCATGCTTAGCAAATAGCATGTCAGAATTTCCTCGCACAGTAACACGTCGGTCAGGAAATGGCGCAGTGG
GCGTGGATTGGCGAGACTTCCTTCCATTGGAGTTGCGTAAAAGTAAGGTACGCGAACAAATTTGGGGGAAAAGGGGAAATATGGGCGTCAGAGTTGGGGCTCGGCCTCTA
CGGGTTTCAAATGGGAGAATATTCTCTGAAAATGGGCATTGGCAGAAGAGAATTATGGCGGAGTTGGACTTCATGCACCCAGTTTGTCCGAATGTAGGAAACCTTTCAAA
AGCTGATCCGAATCCATTAATTCTCCTGGACGATCATTCCTGA
mRNA sequenceShow/hide mRNA sequence
GTCCTCTTTTCAGACATTCCTTTTCCATCAAATTACAAAAAAAAAAAGCAGTAGATGTAAGTGTAACCAACTCAAATCCCACCAATCATATGCTGCATCCCATATCTCCA
ACACCGTTTCAGCACAGTAATCAAACTCAGAATTCTAATGTTTTTACTTTACTTTACTCTGTACTTGGGTGTTTAAGCAAAACGATGATACTTTAACATTAAAAAGCATC
AAGTGGGGGAATTCATGAAATGGATATATGATGAAAGCAGTGCATGTCCTTAAGGAAACATACCAAAAGCCCCTCTTGAAAGTGGAACCTCATAATTCCGGTTGCGACTT
TTCGTCGAACACCTTATACGCAATGGGCCATGAAAACCTCGACGCAACCGTGTGTTCGACACGCAGACCATGCTTAGCAAATAGCATGTCAGAATTTCCTCGCACAGTAA
CACGTCGGTCAGGAAATGGCGCAGTGGGCGTGGATTGGCGAGACTTCCTTCCATTGGAGTTGCGTAAAAGTAAGGTACGCGAACAAATTTGGGGGAAAAGGGGAAATATG
GGCGTCAGAGTTGGGGCTCGGCCTCTACGGGTTTCAAATGGGAGAATATTCTCTGAAAATGGGCATTGGCAGAAGAGAATTATGGCGGAGTTGGACTTCATGCACCCAGT
TTGTCCGAATGTAGGAAACCTTTCAAAAGCTGATCCGAATCCATTAATTCTCCTGGACGATCATTCCTGA
Protein sequenceShow/hide protein sequence
MMKAVHVLKETYQKPLLKVEPHNSGCDFSSNTLYAMGHENLDATVCSTRRPCLANSMSEFPRTVTRRSGNGAVGVDWRDFLPLELRKSKVREQIWGKRGNMGVRVGARPL
RVSNGRIFSENGHWQKRIMAELDFMHPVCPNVGNLSKADPNPLILLDDHS