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Tan0020552 (gene) of Snake gourd v1 genome

Gene IDTan0020552
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:107883082..107883339
RNA-Seq ExpressionTan0020552
SyntenyTan0020552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066754.1 hypothetical protein E6C27_scaffold271G00930 [Cucumis melo var. makuwa]1.7e-1971.76Show/hide
Query:  MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSGSDRVILGSASSP
        M S+KF M ALLVVA VL QA MSLGIR+LSNKEMKM  MGV    MLLGALP+GP PPSAPS+R NPAPFS  DRV++ SA SP
Subjt:  MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSGSDRVILGSASSP

KAG6591766.1 Protein DOG1-like 4, partial [Cucurbita argyrosperma subsp. sororia]5.4e-0566.67Show/hide
Query:  DSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGAL
        DS    M ALLV ALVL++AD+SLGIRRLS KEMKMASMG   VD+ +G L
Subjt:  DSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGAL

KAG6607932.1 hypothetical protein SDJN03_01274, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1564.38Show/hide
Query:  MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSG
        M +KKFTMAA L +A +L Q   +L IR   +K+ K+ SMGV+D DMLLG+LPRGPIPPSAPS+R NPAPFSG
Subjt:  MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSG

KGN55050.1 hypothetical protein Csa_012928 [Cucumis sativus]2.3e-1971.76Show/hide
Query:  MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSGSDRVILGSASSP
        M SKK  M ALLVVALVL QA MSLGIR+LSNKEMKM  +GV    MLLGALP+GP PPSAPS+R NPAPFS  DRV++ SA SP
Subjt:  MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSGSDRVILGSASSP

TrEMBL top hitse value%identityAlignment
A0A0A0KZH3 Uncharacterized protein1.1e-1971.76Show/hide
Query:  MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSGSDRVILGSASSP
        M SKK  M ALLVVALVL QA MSLGIR+LSNKEMKM  +GV    MLLGALP+GP PPSAPS+R NPAPFS  DRV++ SA SP
Subjt:  MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSGSDRVILGSASSP

A0A5A7VHE0 Uncharacterized protein8.4e-2071.76Show/hide
Query:  MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSGSDRVILGSASSP
        M S+KF M ALLVVA VL QA MSLGIR+LSNKEMKM  MGV    MLLGALP+GP PPSAPS+R NPAPFS  DRV++ SA SP
Subjt:  MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSGSDRVILGSASSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGCAAAAAGTTCACAATGGCGGCATTGTTGGTGGTGGCCTTGGTGTTGTTCCAAGCTGACATGAGCTTGGGAATCAGGAGGTTGTCCAACAAGGAGATGAAGAT
GGCTTCAATGGGTGTGATCGACGTCGACATGCTGCTCGGTGCTCTTCCGAGAGGCCCGATACCGCCCTCTGCCCCGAGCGACCGGAGCAATCCCGCTCCCTTCAGCGGCA
GCGATCGGGTGATCTTGGGGTCTGCCTCGAGCCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGCAAAAAGTTCACAATGGCGGCATTGTTGGTGGTGGCCTTGGTGTTGTTCCAAGCTGACATGAGCTTGGGAATCAGGAGGTTGTCCAACAAGGAGATGAAGAT
GGCTTCAATGGGTGTGATCGACGTCGACATGCTGCTCGGTGCTCTTCCGAGAGGCCCGATACCGCCCTCTGCCCCGAGCGACCGGAGCAATCCCGCTCCCTTCAGCGGCA
GCGATCGGGTGATCTTGGGGTCTGCCTCGAGCCCCTGA
Protein sequenceShow/hide protein sequence
MDSKKFTMAALLVVALVLFQADMSLGIRRLSNKEMKMASMGVIDVDMLLGALPRGPIPPSAPSDRSNPAPFSGSDRVILGSASSP