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Tan0020556 (gene) of Snake gourd v1 genome

Gene IDTan0020556
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:8234822..8236369
RNA-Seq ExpressionTan0020556
SyntenyTan0020556
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602236.1 hypothetical protein SDJN03_07469, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1988.33Show/hide
Query:  DLPLSLFSLLVAQFGTSSELLISRSIVFVCFSISRRFKACFFGNPFCRGSSIQDLYLISN
        DLPLS+FSLLVAQFGTSSELLISRSI+FVCFS+SRRFKACFF N FC GSSIQDLYLI+N
Subjt:  DLPLSLFSLLVAQFGTSSELLISRSIVFVCFSISRRFKACFFGNPFCRGSSIQDLYLISN
TrEMBL top hitse value%identityAlignment
A0A0A0KCH0 Uncharacterized protein3.6e-4566.31Show/hide
Query:  KKKEKKIGI----FIFSEEEK--IEEGRKNGNVCNFLLLSLCLILLFFCHFISPSRTSIFLYSIFCFCFSLYPFPLSPTLSLSLSYCVFFFSVGFSFGSL
        +K+  KI I    FI  E +K  +++  ++GNV N  LLSLCLILLFFCHFI  SRT  FLYSIF F F L   PLSP LSLSL++   FF V       
Subjt:  KKKEKKIGI----FIFSEEEK--IEEGRKNGNVCNFLLLSLCLILLFFCHFISPSRTSIFLYSIFCFCFSLYPFPLSPTLSLSLSYCVFFFSVGFSFGSL

Query:  GLSQMCCTLYARIFFILFHKLRSAFLEDLPLSLFSLLVAQFGTSSELLISRSIVFVCFSISRRFKACFFGNPFCRGSSIQDLYLISN
        GLSQMCCTLYARIFFILFHKLRSAFLEDLPL LFSLLVAQFGTSSE LISR IV V F +SRRFK  FFGN FCRG   QDLYLI+N
Subjt:  GLSQMCCTLYARIFFILFHKLRSAFLEDLPLSLFSLLVAQFGTSSELLISRSIVFVCFSISRRFKACFFGNPFCRGSSIQDLYLISN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATATTTTCTTGGAAATCTCAATATATATATTCAAAGGAAAGAAAACAGAGTTTGAGAGAAATTAAAAAAAAAAAAGAAAAAAAAATTGGGATTTTCATTTTCAG
TGAAGAAGAGAAGATTGAAGAAGGAAGAAAAAATGGAAATGTATGCAACTTTCTCCTCCTTTCTCTCTGCCTAATTTTGCTCTTCTTCTGCCATTTCATCTCTCCCTCAA
GAACTTCAATTTTTCTCTACTCCATTTTTTGTTTCTGTTTCTCTCTCTACCCTTTTCCTCTTTCACCCACTCTCTCTCTCTCTCTTTCTTACTGTGTATTTTTTTTTTCT
GTGGGGTTTTCTTTTGGATCTCTGGGATTATCCCAGATGTGTTGCACTCTCTATGCCAGAATCTTCTTCATCCTCTTTCACAAATTGCGGTCAGCATTTCTCGAGGATCT
TCCATTGTCGCTATTTTCTCTGCTGGTAGCTCAATTCGGCACCTCGAGTGAGCTATTGATTTCTCGTTCGATCGTTTTTGTGTGCTTTTCAATAAGTCGGCGATTTAAAG
CCTGTTTCTTTGGGAATCCGTTCTGTCGTGGGAGTTCGATTCAGGATCTTTATTTGATTTCAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATATTTTCTTGGAAATCTCAATATATATATTCAAAGGAAAGAAAACAGAGTTTGAGAGAAATTAAAAAAAAAAAAGAAAAAAAAATTGGGATTTTCATTTTCAG
TGAAGAAGAGAAGATTGAAGAAGGAAGAAAAAATGGAAATGTATGCAACTTTCTCCTCCTTTCTCTCTGCCTAATTTTGCTCTTCTTCTGCCATTTCATCTCTCCCTCAA
GAACTTCAATTTTTCTCTACTCCATTTTTTGTTTCTGTTTCTCTCTCTACCCTTTTCCTCTTTCACCCACTCTCTCTCTCTCTCTTTCTTACTGTGTATTTTTTTTTTCT
GTGGGGTTTTCTTTTGGATCTCTGGGATTATCCCAGATGTGTTGCACTCTCTATGCCAGAATCTTCTTCATCCTCTTTCACAAATTGCGGTCAGCATTTCTCGAGGATCT
TCCATTGTCGCTATTTTCTCTGCTGGTAGCTCAATTCGGCACCTCGAGTGAGCTATTGATTTCTCGTTCGATCGTTTTTGTGTGCTTTTCAATAAGTCGGCGATTTAAAG
CCTGTTTCTTTGGGAATCCGTTCTGTCGTGGGAGTTCGATTCAGGATCTTTATTTGATTTCAAATTAA
Protein sequenceShow/hide protein sequence
MAIFSWKSQYIYSKERKQSLREIKKKKEKKIGIFIFSEEEKIEEGRKNGNVCNFLLLSLCLILLFFCHFISPSRTSIFLYSIFCFCFSLYPFPLSPTLSLSLSYCVFFFS
VGFSFGSLGLSQMCCTLYARIFFILFHKLRSAFLEDLPLSLFSLLVAQFGTSSELLISRSIVFVCFSISRRFKACFFGNPFCRGSSIQDLYLISN