CuGenDBv2

Gene ID	Tan0020575
Organism	Trichosanthes anguina (Snake gourd v1)
Description	classical arabinogalactan protein 4
Genome location	LG01:5020210..5020761
RNA-Seq Expression	Tan0020575
Synteny	Tan0020575
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6576849.1 hypothetical protein SDJN03_24423, partial [Cucurbita argyrosperma subsp. sororia]

6.5e-48

72.34

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Query:  MASFALLNVLTVALLLISAAANSPLPSPAPGPAS-PWKWTPNTEPPSSPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPPR
        MASFA+LNV+T ALLLISAAANSPLPSPAP P S PWKWTP+TE PSSPP   PP P          V+PPE+SPVPSS +PTSPP+ANPP LSPAA P 
Subjt:  MASFALLNVLTVALLLISAAANSPLPSPAPGPAS-PWKWTPNTEPPSSPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPPR

Query:  AEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI
        A KSP HAPSPSKTK PAPAPSKMSPTPA+APKSS  P SSPP+PNGEMEPP P      PK  NGG ANRFAI GSVA GL+A ALI
Subjt:  AEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI

KAG7014869.1 hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.7e-49

72.87

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Query:  MASFALLNVLTVALLLISAAANSPLPSPAPGPAS-PWKWTPNTEPPSSPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPPR
        MASFA+LNV+T ALLLISAAANSPLPSPAP P S PWKWTP+TE PSSPP   PP P          V+PPE+SPVPSS +PTSPP+ANPP LSPAA P 
Subjt:  MASFALLNVLTVALLLISAAANSPLPSPAPGPAS-PWKWTPNTEPPSSPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPPR

Query:  AEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI
        A KSP HAPSPSKTK PAPAPSKMSPTPA+APKSS  P SSPP+PNGEMEPP P      PK  NGG ANRFAIGGSVA GL+A ALI
Subjt:  AEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI

XP_008462882.1 PREDICTED: classical arabinogalactan protein 4 [Cucumis melo]

5.3e-50

72.63

Show/hide

Query:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM--PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAP
        MAS  LLN+LT+A LLISAAANSP PSPAP   SP WKWTP  +PPSSPPTA PPM    PPSP  S P TPPE+SPVPSS+SPTSPP ANPP LSP AP
Subjt:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM--PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAP

Query:  PRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI
        P A  SPSHAPSP+KTK PAPAPSK+SP PAKAPKSS+AP SSPPSPNG+MEPP P     P KEGNG GANRFAIGGS+A G +  A I
Subjt:  PRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI

XP_011654351.1 classical arabinogalactan protein 4 [Cucumis sativus]

1.7e-48

72.63

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Query:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM--PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAP
        MAS  LLN+LT+A LLIS AANSP PSPAP   SP WKWTP+ EPPSSPPTA PPM    PPSP  S P TPPE+SPVP+S++PTSPP ANPP LSP AP
Subjt:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM--PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAP

Query:  PRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI
        P A KSPSHAPSP+KTK PAPAPSK SP PAKAPKSS+AP SSPPSPNG+MEPP P     P KEGNG GANRFAIGGS+A GL+  A I
Subjt:  PRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI

XP_038877309.1 vegetative cell wall protein gp1-like [Benincasa hispida]

1.7e-51

75.66

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Query:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM-PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPP
        MAS  +L VLTVALLLISAAANSP+PSPAPGP SP WKWTP+ EPPSSPP A PPM   PPSP  S P TPPEISP+PSS++PT PP+ANPP LSP A P
Subjt:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM-PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPP

Query:  RAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI
           KSPSHAPSP+KTK PAPAPSKMSP+PAKAPKSS+APASSPPSPNG MEPPAP     P K+ NGG ANRFAIGGSVAVGL+  ALI
Subjt:  RAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0Q7 Uncharacterized protein

8.3e-49

72.63

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Query:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM--PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAP
        MAS  LLN+LT+A LLIS AANSP PSPAP   SP WKWTP+ EPPSSPPTA PPM    PPSP  S P TPPE+SPVP+S++PTSPP ANPP LSP AP
Subjt:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM--PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAP

Query:  PRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI
        P A KSPSHAPSP+KTK PAPAPSK SP PAKAPKSS+AP SSPPSPNG+MEPP P     P KEGNG GANRFAIGGS+A GL+  A I
Subjt:  PRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI

A0A1S3CHW9 classical arabinogalactan protein 4

2.6e-50

72.63

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Query:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM--PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAP
        MAS  LLN+LT+A LLISAAANSP PSPAP   SP WKWTP  +PPSSPPTA PPM    PPSP  S P TPPE+SPVPSS+SPTSPP ANPP LSP AP
Subjt:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM--PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAP

Query:  PRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI
        P A  SPSHAPSP+KTK PAPAPSK+SP PAKAPKSS+AP SSPPSPNG+MEPP P     P KEGNG GANRFAIGGS+A G +  A I
Subjt:  PRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI

A0A5A7V3Q7 Classical arabinogalactan protein 4

2.6e-50

72.63

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Query:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM--PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAP
        MAS  LLN+LT+A LLISAAANSP PSPAP   SP WKWTP  +PPSSPPTA PPM    PPSP  S P TPPE+SPVPSS+SPTSPP ANPP LSP AP
Subjt:  MASFALLNVLTVALLLISAAANSPLPSPAPGPASP-WKWTPNTEPPSSPPTAGPPM--PPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAP

Query:  PRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI
        P A  SPSHAPSP+KTK PAPAPSK+SP PAKAPKSS+AP SSPPSPNG+MEPP P     P KEGNG GANRFAIGGS+A G +  A I
Subjt:  PRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI

A0A6J1E3R0 extensin-like

1.2e-47

71.28

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Query:  MASFALLNVLTVALLLISAAANSPLPSPAPGPAS-PWKWTPNTEPPSSPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPPR
        MASFA+LNV+T ALLLISA+ANSPLPSPAP P S PWKWTP+T+ PSSPP   PP P          V+PPE+SPVPSS +PTSPP+ANPP LSPAA P 
Subjt:  MASFALLNVLTVALLLISAAANSPLPSPAPGPAS-PWKWTPNTEPPSSPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPPR

Query:  AEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI
        A KSP HAPSPSKTK PAPAPSKMS TPA+APKSS AP SSPP+PNGEMEPP P      PK  NGG ANRFAIGG+VA GL+A ALI
Subjt:  AEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI

A0A6J1JCM0 extensin-like

2.3e-46

71.28

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Query:  MASFALLNVLTVALLLISAAANSPLPSPAPGPAS-PWKWTPNTEPPSSPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPPR
        MASFA+LNV+T ALLLISA+ANSPLPS AP P S PWKWTP+TE PSSPP   PP P          V+PPE+SPVPSS +PTSP +ANPP LSPAA P 
Subjt:  MASFALLNVLTVALLLISAAANSPLPSPAPGPAS-PWKWTPNTEPPSSPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPPR

Query:  AEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI
        A KSP HAPSPSKTK PAPAPSKMSPTPA+APKSS APASSPP+PNGEMEPP P      PK  NGG ANRFAI  SVA GL+A ALI
Subjt:  AEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAP-----PPKEGNGGGANRFAIGGSVAVGLIAMALI

SwissProt top hits

e value

%identity

Alignment

Q9FPQ6 Vegetative cell wall protein gp1

2.7e-04

42.77

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Query:  LNVLTVALLLISAA---------ANSPLPSPA-PGPASPWKWTPNTEPPS-SPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPA
        +NVL V L  +++A          N P PSPA P PA P    P+  PPS +PP+ GPP P PPSP   AP +P   SP P S +P SP   +P   SPA
Subjt:  LNVLTVALLLISAA---------ANSPLPSPA-PGPASPWKWTPNTEPPS-SPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPA

Query:  APPRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAPP
         P  A  SP     PS + P  P+PS  SP P   P S   P+ SPP P     PP PP
Subjt:  APPRAEKSPSHAPSPSKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAPP

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCTTCCTTCGCCCTTCTGAATGTTCTCACGGTGGCGCTGCTGCTCATCTCCGCCGCTGCCAACTCACCCCTACCGTCTCCGGCGCCAGGCCCTGCATCGCCGTGGAA
ATGGACTCCCAATACAGAGCCACCATCCTCTCCACCAACGGCCGGGCCGCCAATGCCGCCGCCACCATCGCCGGAAGGGTCTGCGCCGGTGACACCACCGGAGATCAGCC
CCGTTCCCTCATCCCATTCACCGACTTCACCGCCGGAGGCAAACCCACCAATGTTGTCACCGGCCGCTCCGCCACGGGCGGAGAAGAGTCCCAGTCATGCACCGTCGCCG
TCAAAAACCAAACCACCAGCTCCGGCTCCGTCGAAAATGAGTCCAACGCCGGCGAAGGCGCCGAAATCCTCTGAAGCTCCGGCGAGTAGTCCTCCATCACCGAATGGAGA
GATGGAGCCACCGGCGCCGCCGCCGAAGGAGGGGAACGGCGGCGGTGCAAACAGATTCGCCATTGGTGGGTCTGTTGCAGTTGGATTAATAGCTATGGCTTTGATCGTCT
AA

mRNA sequence

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Protein sequence

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MASFALLNVLTVALLLISAAANSPLPSPAPGPASPWKWTPNTEPPSSPPTAGPPMPPPPSPEGSAPVTPPEISPVPSSHSPTSPPEANPPMLSPAAPPRAEKSPSHAPSP
SKTKPPAPAPSKMSPTPAKAPKSSEAPASSPPSPNGEMEPPAPPPKEGNGGGANRFAIGGSVAVGLIAMALIV

Tan0020575 (gene) of Snake gourd v1 genome