CuGenDBv2

Gene ID	Tan0020591
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Genome location	LG11:24181672..24183876
RNA-Seq Expression	Tan0020591
Synteny	Tan0020591
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]

8.4e-41

68.29

Show/hide

Query:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES
        +VP++NATR VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS++ MFGQ S Q  H+ LKYI+N+RM EG+SVR+HVL+MMVHFN+AE 
Subjt:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES

Query:  NGASIDESSQVSFILETLPDSFL
        NGA IDE+SQVSFILE+LP+SFL
Subjt:  NGASIDESSQVSFILETLPDSFL

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]

8.4e-41

68.29

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Query:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES
        +VP++NATR VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS++ MFGQ S Q  H+ LKYI+N+RM EG+SVR+HVL+MMVHFN+AE 
Subjt:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES

Query:  NGASIDESSQVSFILETLPDSFL
        NGA IDE+SQVSFILE+LP+SFL
Subjt:  NGASIDESSQVSFILETLPDSFL

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]

8.4e-41

68.29

Show/hide

Query:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES
        +VP++NATR VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS++ MFGQ S Q  H+ LKYI+N+RM EG+SVR+HVL+MMVHFN+AE 
Subjt:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES

Query:  NGASIDESSQVSFILETLPDSFL
        NGA IDE+SQVSFILE+LP+SFL
Subjt:  NGASIDESSQVSFILETLPDSFL

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]

8.4e-41

68.29

Show/hide

Query:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES
        +VP++NATR VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS++ MFGQ S Q  H+ LKYI+N+RM EG+SVR+HVL+MMVHFN+AE 
Subjt:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES

Query:  NGASIDESSQVSFILETLPDSFL
        NGA IDE+SQVSFILE+LP+SFL
Subjt:  NGASIDESSQVSFILETLPDSFL

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

8.4e-41

68.29

Show/hide

Query:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES
        +VP++NATR VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS++ MFGQ S Q  H+ LKYI+N+RM EG+SVR+HVL+MMVHFN+AE 
Subjt:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES

Query:  NGASIDESSQVSFILETLPDSFL
        NGA IDE+SQVSFILE+LP+SFL
Subjt:  NGASIDESSQVSFILETLPDSFL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

4.1e-41

68.29

Show/hide

Query:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES
        +VP++NATR VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS++ MFGQ S Q  H+ LKYI+N+RM EG+SVR+HVL+MMVHFN+AE 
Subjt:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES

Query:  NGASIDESSQVSFILETLPDSFL
        NGA IDE+SQVSFILE+LP+SFL
Subjt:  NGASIDESSQVSFILETLPDSFL

A0A5A7TU93 Gag/pol protein

4.1e-41

68.29

Show/hide

Query:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES
        +VP++NATR VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS++ MFGQ S Q  H+ LKYI+N+RM EG+SVR+HVL+MMVHFN+AE 
Subjt:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES

Query:  NGASIDESSQVSFILETLPDSFL
        NGA IDE+SQVSFILE+LP+SFL
Subjt:  NGASIDESSQVSFILETLPDSFL

A0A5A7TWB9 Gag/pol protein

4.1e-41

68.29

Show/hide

Query:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES
        +VP++NATR VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS++ MFGQ S Q  H+ LKYI+N+RM EG+SVR+HVL+MMVHFN+AE 
Subjt:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES

Query:  NGASIDESSQVSFILETLPDSFL
        NGA IDE+SQVSFILE+LP+SFL
Subjt:  NGASIDESSQVSFILETLPDSFL

A0A5A7V4M1 Gag/pol protein

4.1e-41

68.29

Show/hide

Query:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES
        +VP++NATR VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS++ MFGQ S Q  H+ LKYI+N+RM EG+SVR+HVL+MMVHFN+AE 
Subjt:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES

Query:  NGASIDESSQVSFILETLPDSFL
        NGA IDE+SQVSFILE+LP+SFL
Subjt:  NGASIDESSQVSFILETLPDSFL

A0A5D3CPJ6 Gag/pol protein

4.1e-41

68.29

Show/hide

Query:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES
        +VP++NATR VR+ Y+RW KAN+KA+ Y+LAS+S++LAKKHE M+TA+EIMDS++ MFGQ S Q  H+ LKYI+N+RM EG+SVR+HVL+MMVHFN+AE 
Subjt:  KVPSSNATRNVRDAYDRWIKANDKAKVYMLASMSDILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAES

Query:  NGASIDESSQVSFILETLPDSFL
        NGA IDE+SQVSFILE+LP+SFL
Subjt:  NGASIDESSQVSFILETLPDSFL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGATGGCGTTGCAACGCCAGCGCAGGCGTCGCAACGCTGAAGCATCTGAGACGCGCGACATGAAGGAGTCAGCGTTGCAACGCGATCCTCAACGTTGCAACGCTACTGG
AGTAACGCTTCAATGGGCAAAAACGGACAAGGTGCAGCGTTGCAACACCGAAGTCCTCCCTTCGGCGGATTTTATTGGATGGGGACTTTGGGGTCTAAAGATAGAGGGTT
ACACTCATAAGGTGCCAAGCTCAAATGCTACACGAAATGTTCGTGATGCATATGATCGATGGATCAAGGCCAATGATAAGGCCAAGGTCTATATGCTGGCAAGTATGTCT
GACATATTAGCCAAGAAGCATGAGGGCATGATGACCGCTAAGGAAATCATGGATTCAATGAAGGGTATGTTTGGACAACAGTCTACACAGGCCTGTCACAATGACCTCAA
GTATATATTCAACTCGAGGATGCCAGAGGGTTCATCTGTTCGAGATCATGTCCTAGATATGATGGTACACTTTAACATCGCGGAGTCGAATGGTGCTTCCATCGATGAAT
CGAGTCAGGTCAGCTTCATTCTGGAAACTCTTCCAGATAGTTTCCTATAG

mRNA sequence

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Protein sequence

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MMALQRQRRRRNAEASETRDMKESALQRDPQRCNATGVTLQWAKTDKVQRCNTEVLPSADFIGWGLWGLKIEGYTHKVPSSNATRNVRDAYDRWIKANDKAKVYMLASMS
DILAKKHEGMMTAKEIMDSMKGMFGQQSTQACHNDLKYIFNSRMPEGSSVRDHVLDMMVHFNIAESNGASIDESSQVSFILETLPDSFL

Tan0020591 (gene) of Snake gourd v1 genome