CuGenDBv2

Gene ID	Tan0020597
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Transcription initiation factor IIF subunit alpha
Genome location	LG07:72556872..72562100
RNA-Seq Expression	Tan0020597
Synteny	Tan0020597
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0005674 - transcription factor TFIIF complex (cellular component) GO:0001096 - TFIIF-class transcription factor complex binding (molecular function) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function) GO:0008168 - methyltransferase activity (molecular function) GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domains	IPR008851 - Transcription initiation factor IIF, alpha subunit IPR011039 - Transcription Factor IIF, Rap30/Rap74, interaction IPR036388 - Winged helix-like DNA-binding domain superfamily IPR036390 - Winged helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6606328.1 Transcription initiation factor IIF subunit alpha, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-277

95.36

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKDSVGA+GRGRRKPT DENEGN SDRGEEDEE+EAARKNRLGLNKKGGGDDDDEEG RGGDHDLDDDDI+KGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGED--DDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKP
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE+  DDDDDAEEESGGTPV PSKQKD VKEEAAANSPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGED--DDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKP

Query:  TPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         PSGSAKGTPSTAK+AKGKRKNGEDVKPSS PPKKMKTETESK+TDEG STS+STASKGAAASVKTE ASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  TPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_004152016.1 transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus]

7.0e-276

94.61

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK++VG SGRGRRK TGDENEGN SDRGEEDEE+EAARKNRLGL+KKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE-DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE DDDDDD +E++GGTPV+PSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE-DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAK+AKGKRKNGEDVKPSS PPKKMKTETESK TDEG  TSKSTASKGA ASVKTE +S SGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_022931161.1 transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita moschata]

1.2e-278

95.73

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKDSVGA+GRGRRKPT DENEGN SDRGEEDEE+EAARKNRLGLNKKGGGDDDDEEGPRGG+HDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG--EDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKP
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG  EDDDDDDAEEESGGTPV PSKQKD VKEEAAANSPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG--EDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKP

Query:  TPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         PSGSAKGTPSTAK+AKGKRKNGEDVKPSS PPKKMKTETESK+TDEG STS+STASKGAAASVKTE ASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  TPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_023532767.1 transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita pepo subsp. pepo]

2.4e-276

94.81

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        M  DLLLKPSCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKDSVGA+GRGRRKPT D+NEGN SDRGE DEE+EAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE---DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSK
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLL+RTGGLNDSDGE   DDDDDDAEEESGGTPV PSKQKD VKEEAAANSPSK
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE---DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSK

Query:  PTPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKF
        P PSGSAKGT STAK+AKGKRKNGEDVKPSS PPKKMKTETESK+TDEG STS+STASKGAAASVKTE ASASGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_038888042.1 transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida]

2.2e-277

95.54

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        MSFDL+LKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK+ VG SGRGRRKPTGDENEGN SDRGEEDEE+EA RKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE-DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE DDDDDD +E++GGTPV+PSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE-DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAK+AKGKRKNGEDVKPSS PPKKMKTETESK+TDE  STSKSTASKGA A VKTE AS SGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCA6 Transcription initiation factor IIF subunit alpha

3.4e-276

94.61

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK++VG SGRGRRK TGDENEGN SDRGEEDEE+EAARKNRLGL+KKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE-DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE DDDDDD +E++GGTPV+PSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE-DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAK+AKGKRKNGEDVKPSS PPKKMKTETESK TDEG  TSKSTASKGA ASVKTE +S SGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A1S4DWR2 Transcription initiation factor IIF subunit alpha

9.9e-276

94.61

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDK++VG SGRGRRK TGDENEGN SDRGEEDEE+EAARKNRLGL+KKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD-DDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD DDDD +E++GGTPV+PSKQKDTVKEEAAANSPSKPT
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD-DDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
        PSGSAKGTPSTAK+AKGKRKNGEDVKPSS PPKKMKTETE K TDEG  TSKSTASKGA ASVKTE +S SGPVTEEEIRAVLRQRTPVTTQDLVAKFKA
Subjt:  PSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKA

Query:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        RLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  RLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1E3E1 Transcription initiation factor IIF subunit alpha

1.5e-271

93.69

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        MSFDLLLKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKD+VGASGRGRRK TGDENEGN SDRGEEDEE+EAARKNRLGLNKK  GDDDDEEGPRGGDHD+DDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE-DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPT
        TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE DDDDDD EE+ GGTPVV SKQKDTVKEEAAA+SPSKP 
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE-DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPT

Query:  PSGSAKGTPSTAKSAKGKRK-NGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK
        PSGS+KGTPS+ K++KGKRK NG+DVKPS+VPPKK+KTET+SK+TDEG STSKSTASKGA ASVKTESA  SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  PSGSAKGTPSTAKSAKGKRK-NGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1ESX1 Transcription initiation factor IIF subunit alpha

5.6e-279

95.73

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET
        GPAAFGEVEKFDDKDSVGA+GRGRRKPT DENEGN SDRGEEDEE+EAARKNRLGLNKKGGGDDDDEEGPRGG+HDLDDDDIEKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG--EDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKP
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG  EDDDDDDAEEESGGTPV PSKQKD VKEEAAANSPSKP
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG--EDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKP

Query:  TPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK
         PSGSAKGTPSTAK+AKGKRKNGEDVKPSS PPKKMKTETESK+TDEG STS+STASKGAAASVKTE ASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  TPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        ARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  ARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1K1N5 Transcription initiation factor IIF subunit alpha

5.8e-276

94.65

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEK-GDDWEHEEIFTDDDE
        GPAAFGEVEKFDDKDS+GA+GRGRRKPT DENEGN SDRGEEDEE+EAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIE  GDDWEHEEIFTDDDE
Subjt:  GPAAFGEVEKFDDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEK-GDDWEHEEIFTDDDE

Query:  TTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE----DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSP
        TTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRR+GGLNDSDGE    DDDDDDAEEESGGTPV PSKQKD VKEEAAANSP
Subjt:  TTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE----DDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSP

Query:  SKPTPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVA
        SKP PSGSAKGT STAK+AKGKRKNGEDVKPSS PPKKMKTETESK+TDEG STS+STASKGAAASVKTE ASASGPVTEEEIRAVLRQRTPVTTQDLVA
Subjt:  SKPTPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVA

Query:  KFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KFKARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  KFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

SwissProt top hits

e value

%identity

Alignment

Q54WV4 General transcription factor IIF subunit 1

8.7e-11

27.08

Show/hide

Query:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKF
        K  PW LED  G   +QG++EG+Q S+ Y+L + Q      A+P   WYNF    +++ LT EEAE+ MK + +  D +   + K      +  G  E  
Subjt:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKF

Query:  DDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDL
          K          R    D N   T++  ++ ++  A R+ R     +G G+D D         D DDD    GD        T +DE    + EE ED+
Subjt:  DDKDSVGASGRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDL

Query:  APEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDAEEESGGTPVVPSKQ------KDTVKEEAAANSPSKPTPSGSAK
                E+K+    + ++N+ E  L+    + K     TGG +D D ++DD+D  +++    P V  K         +VK+E      SK +     K
Subjt:  APEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDAEEESGGTPVVPSKQ------KDTVKEEAAANSPSKPTPSGSAK

Query:  GTPSTAKSAKGK-RKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQ
           S+ KS + K +KN  D    +   KK+K E  S    +  S S+    +      +        P TEE I+ VL++   V + DL+  FK  L++ 
Subjt:  GTPSTAKSAKGK-RKNGEDVKPSSVPPKKMKTETESKTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQ

Query:  EDKNAFAEILRRISRIQKTNG
        ++K  F  ++  ++R+ + NG
Subjt:  EDKNAFAEILRRISRIQKTNG

Q9SU25 Transcription initiation factor IIF subunit alpha

1.6e-182

67.21

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL
        MS  L L  SC GCGS ++LYGS+C+HMTLCL CG+TMA+NK KC++CG  VTRLIREYNVRA+A +DKNYFIGRF++GLPNF  K+ +ENKWSL KD  
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQ TDA REK KN+PW+LEDETGQFQ+QGHLEGSQSATYYLLV+Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVEKFDDKDSVGAS---GRGRRKPT-GDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTD
        GPA FGEV+  ++K+S G S   GRGR+K + GDE EGN SDRG+EDEE+EA+RK+RLGLN+K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTD
Subjt:  GPAAFGEVEKFDDKDSVGAS---GRGRRKPT-GDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTD

Query:  DDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSP
        DDE    D EERED LAPE+PAPPEIKQDEDDE+ E E EGGLSKSGKELKKLL +  GL++SD +DDDD D EEE+    V  SKQK+  KEE   N+P
Subjt:  DDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSP

Query:  SKPTPSGSAKGTPSTAKSAKGKRK--NGEDVKPSSVPPKKMKTETESKTT---DEGTSTSKSTASKGA-----AASVKTESASASGPVTEEEIRAVLRQR
        +KP PSG  +GTP  AK +KGKRK  +G+  KPSS   KK+KTE + K++   +   + SKS     A     A++  + S++A+GPVTE+EIRAVL ++
Subjt:  SKPTPSGSAKGTPSTAKSAKGKRK--NGEDVKPSSVPPKKMKTETESKTT---DEGTSTSKSTASKGA-----AASVKTESASASGPVTEEEIRAVLRQR

Query:  TPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRK
          VTTQDLV++FKARL+++EDKNAFA ILR+IS+IQK  G  ++VVLR+
Subjt:  TPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRK

Arabidopsis top hits

e value

%identity

Alignment

AT4G12610.1 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

9.3e-117

64.85

Show/hide

Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSVGAS---GRGRRKPT-GDENEGNTSDRGE
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEV+  ++K+S G S   GRGR+K + GDE EGN SDRG+
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSVGAS---GRGRRKPT-GDENEGNTSDRGE

Query:  EDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSK
        EDEE+EA+RK+RLGLN+K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDEDDE+ E E EGGLSK
Subjt:  EDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKSAKGKRK--NGEDVKPSSVPPKKMKTET
        SGKELKKLL +  GL++SD +DDDD D EEE+    V  SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS   KK+KTE 
Subjt:  SGKELKKLLRRTGGLNDSDGEDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKSAKGKRK--NGEDVKPSSVPPKKMKTET

Query:  ESKTT---DEGTSTSKSTASKGA-----AASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYV
        + K++   +   + SKS     A     A++  + S++A+GPVTE+EIRAVL ++  VTTQDLV++FKARL+++EDKNAFA ILR+IS+IQK  G  ++V
Subjt:  ESKTT---DEGTSTSKSTASKGA-----AASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYV

Query:  VLRK
        VLR+
Subjt:  VLRK

AT4G12610.2 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

9.3e-117

64.85

Show/hide

Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSVGAS---GRGRRKPT-GDENEGNTSDRGE
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEV+  ++K+S G S   GRGR+K + GDE EGN SDRG+
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSVGAS---GRGRRKPT-GDENEGNTSDRGE

Query:  EDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSK
        EDEE+EA+RK+RLGLN+K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDEDDE+ E E EGGLSK
Subjt:  EDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKSAKGKRK--NGEDVKPSSVPPKKMKTET
        SGKELKKLL +  GL++SD +DDDD D EEE+    V  SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS   KK+KTE 
Subjt:  SGKELKKLLRRTGGLNDSDGEDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKSAKGKRK--NGEDVKPSSVPPKKMKTET

Query:  ESKTT---DEGTSTSKSTASKGA-----AASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYV
        + K++   +   + SKS     A     A++  + S++A+GPVTE+EIRAVL ++  VTTQDLV++FKARL+++EDKNAFA ILR+IS+IQK  G  ++V
Subjt:  ESKTT---DEGTSTSKSTASKGA-----AASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYV

Query:  VLRK
        VLR+
Subjt:  VLRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCATTCGATCTGCTGCTGAAGCCGTCGTGCAGTGGATGCGGATCCACGACGGAGCTGTATGGGAGCAATTGCAAGCACATGACATTGTGCTTGACCTGTGGCAAAAC
TATGGCTGAGAATAAGGGCAAATGTTACGACTGTGGTGCTACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCGAGTGCAAGTAGCGACAAGAACTACTTCATTG
GTAGGTTCATGAGTGGGCTGCCAAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGACGGTCTACAAGGTCGCCAGCTTACTGATGCCCTGCGG
GAAAAGTACAAGAATAGACCCTGGCTCTTGGAAGATGAAACTGGCCAATTTCAATTCCAAGGTCATCTTGAGGGTTCACAATCAGCAACGTATTACTTGCTTGTATTGCA
AGGAAAGGAATTTACTGCCATTCCTGCAGGTTCTTGGTACAACTTCAACAAAGTGGCACAGTATAAGCAACTTACCTTGGAGGAGGCAGAAGAGAAAATGAAGAATAGAA
AGAAAACAGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGATAGTGTTGGTGCTAGT
GGTAGGGGACGGAGAAAACCTACTGGTGATGAGAATGAAGGTAATACCTCAGATAGGGGAGAAGAAGATGAAGAAGATGAGGCAGCAAGGAAGAACAGATTGGGACTCAA
TAAAAAGGGTGGCGGTGATGATGATGATGAGGAAGGTCCTAGGGGAGGTGACCACGACTTGGATGATGATGATATTGAGAAAGGAGATGATTGGGAGCACGAAGAGATTT
TTACCGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCAGCACCTCCAGAGATTAAACAGGATGAAGATGATGAGGATGAA
GAAAATGAAGGGGAAGGGGGCCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTCAGGCGTACTGGAGGGCTTAATGATTCAGATGGAGAGGATGACGACGACGATGA
TGCGGAAGAGGAGAGTGGTGGCACTCCAGTTGTGCCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTTCTGGATCTG
CCAAGGGAACCCCTTCTACTGCAAAGTCAGCAAAGGGGAAAAGAAAAAATGGCGAGGATGTGAAACCATCCAGTGTACCTCCTAAGAAAATGAAAACAGAGACGGAATCA
AAGACAACAGATGAAGGCACGTCTACTTCTAAAAGTACAGCCTCAAAAGGTGCAGCAGCATCTGTCAAAACAGAATCAGCATCAGCTTCTGGACCCGTTACCGAGGAAGA
AATTAGGGCTGTTTTGCGGCAAAGGACACCTGTAACTACCCAGGATCTTGTTGCAAAATTCAAAGCAAGATTACGATCTCAAGAGGACAAGAATGCTTTTGCGGAAATAC
TGAGGAGAATTTCAAGGATTCAAAAGACGAACGGAGGACCGAGTTATGTTGTGTTGAGAAAACCTGAAGACTAG

mRNA sequence

Show/hide mRNA sequence

CGCGGTGTACGGTCAGAATACTACAAATCATCGTATTATTGCTCATTTCGGTCTCGACTGCGATTTTCTCAAAATTCTCACCGCTCTCTTCATCTTCAACTTTCTGTTCT
TTACGCGGTGGGGCAATGTCATTCGATCTGCTGCTGAAGCCGTCGTGCAGTGGATGCGGATCCACGACGGAGCTGTATGGGAGCAATTGCAAGCACATGACATTGTGCTT
GACCTGTGGCAAAACTATGGCTGAGAATAAGGGCAAATGTTACGACTGTGGTGCTACTGTAACTCGCTTAATAAGAGAATACAATGTTCGAGCGAGTGCAAGTAGCGACA
AGAACTACTTCATTGGTAGGTTCATGAGTGGGCTGCCAAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGACGGTCTACAAGGTCGCCAGCTT
ACTGATGCCCTGCGGGAAAAGTACAAGAATAGACCCTGGCTCTTGGAAGATGAAACTGGCCAATTTCAATTCCAAGGTCATCTTGAGGGTTCACAATCAGCAACGTATTA
CTTGCTTGTATTGCAAGGAAAGGAATTTACTGCCATTCCTGCAGGTTCTTGGTACAACTTCAACAAAGTGGCACAGTATAAGCAACTTACCTTGGAGGAGGCAGAAGAGA
AAATGAAGAATAGAAAGAAAACAGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAT
AGTGTTGGTGCTAGTGGTAGGGGACGGAGAAAACCTACTGGTGATGAGAATGAAGGTAATACCTCAGATAGGGGAGAAGAAGATGAAGAAGATGAGGCAGCAAGGAAGAA
CAGATTGGGACTCAATAAAAAGGGTGGCGGTGATGATGATGATGAGGAAGGTCCTAGGGGAGGTGACCACGACTTGGATGATGATGATATTGAGAAAGGAGATGATTGGG
AGCACGAAGAGATTTTTACCGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCAGCACCTCCAGAGATTAAACAGGATGAA
GATGATGAGGATGAAGAAAATGAAGGGGAAGGGGGCCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTCAGGCGTACTGGAGGGCTTAATGATTCAGATGGAGAGGA
TGACGACGACGATGATGCGGAAGAGGAGAGTGGTGGCACTCCAGTTGTGCCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAA
CACCTTCTGGATCTGCCAAGGGAACCCCTTCTACTGCAAAGTCAGCAAAGGGGAAAAGAAAAAATGGCGAGGATGTGAAACCATCCAGTGTACCTCCTAAGAAAATGAAA
ACAGAGACGGAATCAAAGACAACAGATGAAGGCACGTCTACTTCTAAAAGTACAGCCTCAAAAGGTGCAGCAGCATCTGTCAAAACAGAATCAGCATCAGCTTCTGGACC
CGTTACCGAGGAAGAAATTAGGGCTGTTTTGCGGCAAAGGACACCTGTAACTACCCAGGATCTTGTTGCAAAATTCAAAGCAAGATTACGATCTCAAGAGGACAAGAATG
CTTTTGCGGAAATACTGAGGAGAATTTCAAGGATTCAAAAGACGAACGGAGGACCGAGTTATGTTGTGTTGAGAAAACCTGAAGACTAGAAGAAATGAATTTATGTTTCA
TCTTTGTGATGTAGCTGGTTCAAGATTCCTAGCTGGTTGGGTGGGTTATGTGGTGAAAACTGTATGCTGTAAAAGCTTGAGGGCCTCCTCTTTCACATGTGATACACTTT
TTATGAGGTGCTTTATTCATGCAAAGGATAGATTTGTGACTTTCAAAGAGGCATTCACGGTTGGAATTTAAGTTGTAAGAGATTGGTATACGTTGAGAAAGAAACGAAAA
ATTCAACAGACCCTTTGTCATATTGGTTGTCATATTGGTTTTGTCATTTTCTTAAACACTTTTAAAAATAATGTAATGAGTGTACTTATTTAAAATAGAGTGCTCTTGGT
TT

Protein sequence

Show/hide protein sequence

MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALR
EKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKDSVGAS
GRGRRKPTGDENEGNTSDRGEEDEEDEAARKNRLGLNKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEDDEDE
ENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDAEEESGGTPVVPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKSAKGKRKNGEDVKPSSVPPKKMKTETES
KTTDEGTSTSKSTASKGAAASVKTESASASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

Tan0020597 (gene) of Snake gourd v1 genome