; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020607 (gene) of Snake gourd v1 genome

Gene IDTan0020607
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationLG02:92305433..92310933
RNA-Seq ExpressionTan0020607
SyntenyTan0020607
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452162.1 PREDICTED: uncharacterized protein LOC103493267 [Cucumis melo]8.2e-3132.5Show/hide
Query:  MVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSNNNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNALRGIALRDNFQFRTK
        M +D DV W + +I++      +L+V Y   LS+ L   +  +         GRF + +D+ K+  +F + + D+F +K   +  ++ IALRDNFQ+ T 
Subjt:  MVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSNNNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNALRGIALRDNFQFRTK

Query:  KSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYIRSHHGVNVSYHKAW
        KSN ++++++C+  NC+W +HAS +       W+  +  ++  CS+D  +  H+QA+ ++IKD IK+K+ + G++  TPK+I+ +I   HG+++ Y KAW
Subjt:  KSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYIRSHHGVNVSYHKAW

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]4.2e-5146.95Show/hide
Query:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL
        +G   FIKK MK+ DD+DV W +++ISNG +  CSLVVD RN LS ILD M I TS+  +N +   G+F+  IDV  I   FHI +ND F  K+NLQNAL
Subjt:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL

Query:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI
        R +A+R NF FRT KSN+++L+V C+  NCQW +HAS+ G    + WI KK +++H CSL++V+N H+QA+ S+IK++IK ++   G +  + K+ IS++
Subjt:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI

Query:  RSHHGVNVSYHKA
             ++++Y KA
Subjt:  RSHHGVNVSYHKA

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]2.1e-5048.6Show/hide
Query:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL
        +G   F+ K MK+ DD+DV W ++VI NG    CSLVVD RN LS +LD M I TS+  +N +   G+FH +IDV  I  +FHI +ND F  KKNLQNAL
Subjt:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL

Query:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI
        R +A+RDNFQFRT KSN+ +L+VR    NCQW +HAS+ G    + WI KK + +H CSL++V+N H+QA+ S+IK++IK +  + G +  + K++IS++
Subjt:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI

Query:  RSHHGVNVSYHKAW
        R   G++++Y KAW
Subjt:  RSHHGVNVSYHKAW

XP_022159005.1 uncharacterized protein LOC111025451 [Momordica charantia]2.1e-3137.3Show/hide
Query:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL
        +G   FIKK MK++DD+DV W  +V  NG +  CSLVVD RN LS +LD M I  S+  +N +   G+FH +IDV  I  +FHI +ND F   +NLQNAL
Subjt:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL

Query:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI
        R +A+RDNFQFRT KSN+ + +                        W               ++N H+QA+ S+IK++IK ++ I G +  + K++IS++
Subjt:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI

Query:  RSHHGVNVSYHKAW------LSHTRYSLASSISSSLKFCSFSSM
        R   G +++YHK W      +   R S   S +  L FC    M
Subjt:  RSHHGVNVSYHKAW------LSHTRYSLASSISSSLKFCSFSSM

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]6.3e-2334.31Show/hide
Query:  DDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTI--ETSNNNSVIPEGRFHDTIDVGKIPVDFHILLN----DVFRSKKNLQNALRGIALRDNFQ
        +D+DV+WF  ++   +      +V +  S+ L      +  E  N  S++P        D  ++ +D HI  +    DVF SK+ L      IA++ NF+
Subjt:  DDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTI--ETSNNNSVIPEGRFHDTIDVGKIPVDFHILLN----DVFRSKKNLQNALRGIALRDNFQ

Query:  FRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYIRSHHGVNVSY
        F+T +SN + +  RC+   CQW V ASR      D W+ +K I+ H+CS++ V  SH+QAS SLI D +K++     ++  TPK+I++ +R   GVN+SY
Subjt:  FRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYIRSHHGVNVSY

Query:  HKAW
        +KAW
Subjt:  HKAW

TrEMBL top hitse value%identityAlignment
A0A1S3BT85 uncharacterized protein LOC1034932674.0e-3132.5Show/hide
Query:  MVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSNNNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNALRGIALRDNFQFRTK
        M +D DV W + +I++      +L+V Y   LS+ L   +  +         GRF + +D+ K+  +F + + D+F +K   +  ++ IALRDNFQ+ T 
Subjt:  MVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSNNNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNALRGIALRDNFQFRTK

Query:  KSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYIRSHHGVNVSYHKAW
        KSN ++++++C+  NC+W +HAS +       W+  +  ++  CS+D  +  H+QA+ ++IKD IK+K+ + G++  TPK+I+ +I   HG+++ Y KAW
Subjt:  KSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYIRSHHGVNVSYHKAW

A0A5D3DFS5 SWIM-type domain-containing protein1.5e-2234.68Show/hide
Query:  IKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETS--------NNNSVIPEGRFHD------TIDVGKIPVDFHILLNDVFRSKK
        I+  +++ +D+DV+WF  ++  G +    LV    ++++ +  DM +E S        N  S++P    +D       I V  +   F +   D+F SKK
Subjt:  IKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETS--------NNNSVIPEGRFHD------TIDVGKIPVDFHILLNDVFRSKK

Query:  NLQNALRGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYD--T
         L  +   IA+++NF+F+T KSN K +  +C   NC W V ASR      + W  +K I +HNCS++V+  +HKQAS SLI D I      D + +D  T
Subjt:  NLQNALRGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYD--T

Query:  PKEIISYIRSHHGVNVSYHKAW
        P +I+ ++R+  GVNVSY+KAW
Subjt:  PKEIISYIRSHHGVNVSYHKAW

A0A6J1C328 uncharacterized protein LOC1110069942.0e-5146.95Show/hide
Query:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL
        +G   FIKK MK+ DD+DV W +++ISNG +  CSLVVD RN LS ILD M I TS+  +N +   G+F+  IDV  I   FHI +ND F  K+NLQNAL
Subjt:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL

Query:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI
        R +A+R NF FRT KSN+++L+V C+  NCQW +HAS+ G    + WI KK +++H CSL++V+N H+QA+ S+IK++IK ++   G +  + K+ IS++
Subjt:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI

Query:  RSHHGVNVSYHKA
             ++++Y KA
Subjt:  RSHHGVNVSYHKA

A0A6J1DNQ8 uncharacterized protein LOC1110223471.0e-5048.6Show/hide
Query:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL
        +G   F+ K MK+ DD+DV W ++VI NG    CSLVVD RN LS +LD M I TS+  +N +   G+FH +IDV  I  +FHI +ND F  KKNLQNAL
Subjt:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL

Query:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI
        R +A+RDNFQFRT KSN+ +L+VR    NCQW +HAS+ G    + WI KK + +H CSL++V+N H+QA+ S+IK++IK +  + G +  + K++IS++
Subjt:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI

Query:  RSHHGVNVSYHKAW
        R   G++++Y KAW
Subjt:  RSHHGVNVSYHKAW

A0A6J1DXF3 uncharacterized protein LOC1110254511.0e-3137.3Show/hide
Query:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL
        +G   FIKK MK++DD+DV W  +V  NG +  CSLVVD RN LS +LD M I  S+  +N +   G+FH +IDV  I  +FHI +ND F   +NLQNAL
Subjt:  LGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSN--NNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQNAL

Query:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI
        R +A+RDNFQFRT KSN+ + +                        W               ++N H+QA+ S+IK++IK ++ I G +  + K++IS++
Subjt:  RGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYI

Query:  RSHHGVNVSYHKAW------LSHTRYSLASSISSSLKFCSFSSM
        R   G +++YHK W      +   R S   S +  L FC    M
Subjt:  RSHHGVNVSYHKAW------LSHTRYSLASSISSSLKFCSFSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTGGAATGAGAATGACAATTATGTTGACTACAAGCCTTGGACAACAATCGTTCATAAAGAAGGGTATGAAAATGGTTGACGACAGAGATGTAAGTTGGTTTTT
TGATGTTATTTCTAATGGTACATTGTGTGGTTGTTCACTTGTAGTCGATTATAGAAATAGTTTATCGTTGATTTTGGATGATATGACGATAGAAACGTCCAACAATAACT
CTGTTATTCCCGAGGGTCGTTTTCATGATACCATTGATGTTGGAAAAATACCTGTAGATTTCCATATACTATTGAATGATGTGTTTAGAAGTAAGAAAAATCTTCAAAAT
GCTTTGCGTGGAATTGCATTGAGAGATAACTTCCAATTTAGGACGAAGAAATCTAACAAGAAGTTATTAGTTGTTAGATGTATTGATCGAAATTGTCAATGGTTAGTACA
TGCATCTCGTACTGGAGTTGATACATGTGATACTTGGATAGCTAAGAAAATCATCAATGATCATAACTGTTCTCTTGATGTTGTTATGAACTCTCATAAACAAGCATCTA
CATCTTTAATTAAGGACTACATCAAGAGTAAGATGACCATTGATGGTAATGAATATGATACTCCTAAAGAAATTATATCCTACATTCGTTCTCACCATGGTGTTAATGTG
AGTTATCACAAAGCATGGCTATCACATACCAGGTATTCTCTTGCATCTTCCATTTCTTCATCACTAAAATTTTGTTCTTTTTCTTCTATGTTCGGACTTACCATAGTACC
CATATCGCCAGTGTTTCTATTGATGATATTCGTGTTTTCGACATTATCTCTCATACTTTTCAATATATTACATATTGAAGATGATATTTTTTACAAAATCTGTAGTCCGA
GAAGAACCCTTATGTTTCTTCCCAGTCGATTAGTCACAGAAAATCTAGGGATTTCTCTTGACTTTCTAAATATTAAAAATGAAAAAAAGTTTAGGCCCGATTTGATAATT
ATTTTGTTTTTGTTTTTTGTTTTTCTTGTTTCGTTATCTACTTTTTATATATGTTTTAAAAAACAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTGGAATGAGAATGACAATTATGTTGACTACAAGCCTTGGACAACAATCGTTCATAAAGAAGGGTATGAAAATGGTTGACGACAGAGATGTAAGTTGGTTTTT
TGATGTTATTTCTAATGGTACATTGTGTGGTTGTTCACTTGTAGTCGATTATAGAAATAGTTTATCGTTGATTTTGGATGATATGACGATAGAAACGTCCAACAATAACT
CTGTTATTCCCGAGGGTCGTTTTCATGATACCATTGATGTTGGAAAAATACCTGTAGATTTCCATATACTATTGAATGATGTGTTTAGAAGTAAGAAAAATCTTCAAAAT
GCTTTGCGTGGAATTGCATTGAGAGATAACTTCCAATTTAGGACGAAGAAATCTAACAAGAAGTTATTAGTTGTTAGATGTATTGATCGAAATTGTCAATGGTTAGTACA
TGCATCTCGTACTGGAGTTGATACATGTGATACTTGGATAGCTAAGAAAATCATCAATGATCATAACTGTTCTCTTGATGTTGTTATGAACTCTCATAAACAAGCATCTA
CATCTTTAATTAAGGACTACATCAAGAGTAAGATGACCATTGATGGTAATGAATATGATACTCCTAAAGAAATTATATCCTACATTCGTTCTCACCATGGTGTTAATGTG
AGTTATCACAAAGCATGGCTATCACATACCAGGTATTCTCTTGCATCTTCCATTTCTTCATCACTAAAATTTTGTTCTTTTTCTTCTATGTTCGGACTTACCATAGTACC
CATATCGCCAGTGTTTCTATTGATGATATTCGTGTTTTCGACATTATCTCTCATACTTTTCAATATATTACATATTGAAGATGATATTTTTTACAAAATCTGTAGTCCGA
GAAGAACCCTTATGTTTCTTCCCAGTCGATTAGTCACAGAAAATCTAGGGATTTCTCTTGACTTTCTAAATATTAAAAATGAAAAAAAGTTTAGGCCCGATTTGATAATT
ATTTTGTTTTTGTTTTTTGTTTTTCTTGTTTCGTTATCTACTTTTTATATATGTTTTAAAAAACAAAGCTAA
Protein sequenceShow/hide protein sequence
MDLGMRMTIMLTTSLGQQSFIKKGMKMVDDRDVSWFFDVISNGTLCGCSLVVDYRNSLSLILDDMTIETSNNNSVIPEGRFHDTIDVGKIPVDFHILLNDVFRSKKNLQN
ALRGIALRDNFQFRTKKSNKKLLVVRCIDRNCQWLVHASRTGVDTCDTWIAKKIINDHNCSLDVVMNSHKQASTSLIKDYIKSKMTIDGNEYDTPKEIISYIRSHHGVNV
SYHKAWLSHTRYSLASSISSSLKFCSFSSMFGLTIVPISPVFLLMIFVFSTLSLILFNILHIEDDIFYKICSPRRTLMFLPSRLVTENLGISLDFLNIKNEKKFRPDLII
ILFLFFVFLVSLSTFYICFKKQS