CuGenDBv2

Gene ID	Tan0020645
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Kinesin light chain 3 isoform X1
Genome location	LG04:77576499..77583639
RNA-Seq Expression	Tan0020645
Synteny	Tan0020645
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022948435.1 uncharacterized protein LOC111452120 [Cucurbita moschata]

2.7e-30

83.33

Show/hide

Query:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK
        +Q+M VSKEDPSLVQAENVLFE ISAYQKFKGSTFETPEVKAEY +CLKRLS LISD+KTSR+ RR+S +DLQDEISRL+VELSPYR+QK
Subjt:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK

XP_022997758.1 uncharacterized protein LOC111492620 [Cucurbita maxima]

5.9e-30

82.22

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Query:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK
        +Q+M VSKEDPSLVQAENVLFE ISAYQKFKG+TFETPEVKAEY +CLKRLS LISD+KTSR+ RR+S +DLQDEISRL+VELSPYR+QK
Subjt:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK

XP_023525053.1 uncharacterized protein LOC111788782 [Cucurbita pepo subsp. pepo]

2.7e-30

83.33

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Query:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK
        +Q+M VSKEDPSLVQAENVLFE ISAYQKFKGSTFETPEVKAEY +CLKRLS LISD+KTSR+ RR+S +DLQDEISRL+VELSPYR+QK
Subjt:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK

XP_038901521.1 uncharacterized protein LOC120088362 isoform X1 [Benincasa hispida]

2.4e-31

81.11

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Query:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK
        +Q+M VSK+DPSLV+AENVL E  SAYQKFKGSTF+TPEVKAEYC CLKRLSSLISD +TS+K RRVSL+DLQDEISRL+VELSPYR+QK
Subjt:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK

XP_038901528.1 uncharacterized protein LOC120088362 isoform X2 [Benincasa hispida]

2.4e-31

81.11

Show/hide

Query:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK
        +Q+M VSK+DPSLV+AENVL E  SAYQKFKGSTF+TPEVKAEYC CLKRLSSLISD +TS+K RRVSL+DLQDEISRL+VELSPYR+QK
Subjt:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CPA5 kinesin light chain 1 isoform X3

1.4e-29

76.67

Show/hide

Query:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK
        +Q+M  SKEDPSL+ AENVLFE ISAYQKFKGS FETPEVKAEYCACLK LSSL+ D+KT  + RR+SL+DLQDEISRL+VELSPYR++K
Subjt:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK

A0A6J1CQP6 uncharacterized protein LOC111013309 isoform X2

1.4e-29

76.67

Show/hide

Query:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK
        +Q+M  SKEDPSL+ AENVLFE ISAYQKFKGS FETPEVKAEYCACLK LSSL+ D+KT  + RR+SL+DLQDEISRL+VELSPYR++K
Subjt:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK

A0A6J1CQT4 kinesin light chain 1 isoform X1

1.4e-29

76.67

Show/hide

Query:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK
        +Q+M  SKEDPSL+ AENVLFE ISAYQKFKGS FETPEVKAEYCACLK LSSL+ D+KT  + RR+SL+DLQDEISRL+VELSPYR++K
Subjt:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK

A0A6J1G9U8 uncharacterized protein LOC111452120

1.3e-30

83.33

Show/hide

Query:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK
        +Q+M VSKEDPSLVQAENVLFE ISAYQKFKGSTFETPEVKAEY +CLKRLS LISD+KTSR+ RR+S +DLQDEISRL+VELSPYR+QK
Subjt:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK

A0A6J1KEU5 uncharacterized protein LOC111492620

2.9e-30

82.22

Show/hide

Query:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK
        +Q+M VSKEDPSLVQAENVLFE ISAYQKFKG+TFETPEVKAEY +CLKRLS LISD+KTSR+ RR+S +DLQDEISRL+VELSPYR+QK
Subjt:  MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G37590.1 Tetratricopeptide repeat (TPR)-like superfamily protein

3.4e-07

36.71

Show/hide

Query:  EDPSLVQAENVLFEGISAYQKFKGST--FETPEVKAEYCACLKRLSSLISDEKT--SRKMRRVSLEDLQDEISRLDVEL
        ++ +L  AE+ L + ++AY++F   T   ++ EVK+EY +CLK LS+L++ ++T  + K   +SL +L++EI R+D++L
Subjt:  EDPSLVQAENVLFEGISAYQKFKGST--FETPEVKAEYCACLKRLSSLISDEKT--SRKMRRVSLEDLQDEISRLDVEL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAAAAGATGAACGTATCAAAGGAGGATCCTTCGCTCGTTCAGGCTGAGAATGTACTCTTTGAAGGCATTTCTGCTTATCAAAAGTTCAAAGGTTCAACTTTCGAAAC
TCCTGAAGTCAAGGCCGAGTATTGCGCTTGTTTGAAGCGTCTCTCGAGCCTGATTAGCGATGAAAAAACGAGTAGGAAAATGAGAAGAGTCAGTTTGGAAGATCTACAGG
ACGAAATCAGTCGCCTTGATGTTGAATTGTCTCCATACAGAAGACAAAAAAAAGTTGATATCTTGTTGCTTCTTCAGGCCTTCCTTACTAACTAA

mRNA sequence

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GTTACAATCGCTTGATGCTCTTGGACATTTGGAGATAGCCATGCAAAAGATGAACGTATCAAAGGAGGATCCTTCGCTCGTTCAGGCTGAGAATGTACTCTTTGAAGGCA
TTTCTGCTTATCAAAAGTTCAAAGGTTCAACTTTCGAAACTCCTGAAGTCAAGGCCGAGTATTGCGCTTGTTTGAAGCGTCTCTCGAGCCTGATTAGCGATGAAAAAACG
AGTAGGAAAATGAGAAGAGTCAGTTTGGAAGATCTACAGGACGAAATCAGTCGCCTTGATGTTGAATTGTCTCCATACAGAAGACAAAAAAAAGTTGATATCTTGTTGCT
TCTTCAGGCCTTCCTTACTAACTAACCTGTCTTCTTTTTTCTCAATTATTCAAGTTGGTCCTTTTTTATTTTTTTGCATATTGGCC

Protein sequence

Show/hide protein sequence

MQKMNVSKEDPSLVQAENVLFEGISAYQKFKGSTFETPEVKAEYCACLKRLSSLISDEKTSRKMRRVSLEDLQDEISRLDVELSPYRRQKKVDILLLLQAFLTN

Tan0020645 (gene) of Snake gourd v1 genome