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Tan0020657 (gene) of Snake gourd v1 genome

Gene IDTan0020657
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEF hand calcium-binding protein family
Genome locationLG01:16386670..16386939
RNA-Seq ExpressionTan0020657
SyntenyTan0020657
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]2.0e-2673.33Show/hide
Query:  MSGKSKRYE-RARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI
        MS +SK Y  RAR+SR+QL LIFRNHD D DGRLS TELTEAFRYIGA LP YRA  AL H D DRDGFI EK+FELL+NY E+R+YTVI
Subjt:  MSGKSKRYE-RARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2775Show/hide
Query:  MSGKSKRYE-RARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYT
        M+ KSK Y+ R ++SR+QLS+IFRNHD DGDGRLS TELT AFRYIGA LPSYRA  ALLHTD D DGFI EK+FELL+NY EKRKYT
Subjt:  MSGKSKRYE-RARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYT

KAG6608482.1 Polcalcin Syr v 3, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2670.45Show/hide
Query:  SGKSKRYERARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI
        S KSK+  R+++SR+QLS+IFRNHD DGDGRLSP+ELTEAFRYIG+ +PSYRA +AL H D + DGFI+E+EFELL+NY EKRKYTV+
Subjt:  SGKSKRYERARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2875.56Show/hide
Query:  MSGKSKRYE-RARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI
        M+ KSK Y+ R ++SR+QLS+IFRNHD DGDGRLS TELT AFRYIGA LPSYRA  ALLHTD D DGFI EK+FELL+NY EKRKYTVI
Subjt:  MSGKSKRYE-RARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]3.4e-2672.22Show/hide
Query:  MSGKSKR-YERARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI
        MS KSK  Y RA++SR+QL LIFRNHD D DGRLS TELTEAFRYIGA LP+YRA  ALLH D DRDGFI EK+FE L+NY E+R+YT+I
Subjt:  MSGKSKR-YERARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein1.6e-2672.22Show/hide
Query:  MSGKSKR-YERARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI
        MS KSK  Y RA++SR+QL LIFRNHD D DGRLS TELTEAFRYIGA LP+YRA  ALLH D DRDGFI EK+FE L+NY E+R+YT+I
Subjt:  MSGKSKR-YERARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI

A0A5A7UYC0 Putative calcium-binding protein CML102.0e-1143.04Show/hide
Query:  SKRYERARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEK
        S+   + ++SR+ +  IFR HD DGDGRLS +E+ +AF + G++LP Y+A   + H D + DG+I+E+E + L++Y EK
Subjt:  SKRYERARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEK

A0A5A7VDB9 Putative calcium-binding protein CML279.7e-2773.33Show/hide
Query:  MSGKSKRYE-RARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI
        MS +SK Y  RAR+SR+QL LIFRNHD D DGRLS TELTEAFRYIGA LP YRA  AL H D DRDGFI EK+FELL+NY E+R+YTVI
Subjt:  MSGKSKRYE-RARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI

A0A5N6RQV2 Uncharacterized protein1.5e-1150.67Show/hide
Query:  SRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTV
        +R QL  IFR+HD DGDG+LS  E+  AF Y+G+   SYRA  ALLH D D DG++ E+E + L++Y  K  YT+
Subjt:  SRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTV

A5AWP8 Uncharacterized protein8.8e-1246.84Show/hide
Query:  RARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTV
        ++ +  QQL  IF+ HD +GDG+L+  EL +AF+++GAL+P +RA +AL H D D DG I EKE + L+ Y  K  YT+
Subjt:  RARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTV

SwissProt top hitse value%identityAlignment
Q0DJV6 Probable calcium-binding protein CML182.6e-0538.71Show/hide
Query:  MSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEF
        M   +L  +FR +D +GDG++S  EL    R +GA L      + +   D DRDGF+D  EF
Subjt:  MSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEF

Q5SND2 Probable calcium-binding protein CML307.7e-0536.23Show/hide
Query:  LSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALL-HTDFDRDGFIDEKEFELLLNYVEKRK
        L ++F   DHDGDG ++  EL E+ + +G  + S     AL+   D + DG ID  EF  L + + KR+
Subjt:  LSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALL-HTDFDRDGFIDEKEFELLLNYVEKRK

Q9SRE6 Calcium-binding protein CML382.9e-0436.51Show/hide
Query:  QQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLL
        ++L  +F   D + DGR+SP EL ++F  +G  L    A  A+  +D D DG +D +EF  L+
Subjt:  QQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLL

Q9SU00 Calmodulin-like protein 22.2e-0430.14Show/hide
Query:  MSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRK
        M R +LS +F+  D +GDG+++  EL + F+ +G ++P     + +   D + DG +D  EF  L   + + K
Subjt:  MSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRK

Q9ZR02 Calmodulin-like protein 62.6e-0533.87Show/hide
Query:  MSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEF
        M   +L+ +F+  D DGDG+++  EL E+F+ +G ++P     Q +   D + DG +D +EF
Subjt:  MSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEF

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein7.9e-0534.92Show/hide
Query:  QQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLL
        + L  +F   D + DGR+S  EL ++F+ +G  +    A  A+  +D D DG +D  EF LL+
Subjt:  QQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLL

AT1G76650.1 calmodulin-like 382.1e-0536.51Show/hide
Query:  QQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLL
        ++L  +F   D + DGR+SP EL ++F  +G  L    A  A+  +D D DG +D +EF  L+
Subjt:  QQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLL

AT1G76650.3 calmodulin-like 382.1e-0536.51Show/hide
Query:  QQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLL
        ++L  +F   D + DGR+SP EL ++F  +G  L    A  A+  +D D DG +D +EF  L+
Subjt:  QQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLL

AT4G03290.1 EF hand calcium-binding protein family1.9e-0633.87Show/hide
Query:  MSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEF
        M   +L+ +F+  D DGDG+++  EL E+F+ +G ++P     Q +   D + DG +D +EF
Subjt:  MSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEF

AT4G12860.1 EF hand calcium-binding protein family1.6e-0530.14Show/hide
Query:  MSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRK
        M R +LS +F+  D +GDG+++  EL + F+ +G ++P     + +   D + DG +D  EF  L   + + K
Subjt:  MSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGCAAAAGCAAAAGGTATGAGAGAGCGAGAATGTCAAGACAGCAACTAAGCCTAATCTTCAGAAACCACGACCACGACGGCGATGGCCGCCTCAGCCCCACCGA
GCTCACCGAAGCCTTCCGCTACATTGGCGCCCTTCTGCCATCTTACAGAGCCTTCCAAGCTCTTTTACACACCGACTTTGACCGAGATGGATTCATTGACGAGAAGGAGT
TCGAATTGCTCCTCAATTATGTAGAGAAACGCAAATACACTGTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGCAAAAGCAAAAGGTATGAGAGAGCGAGAATGTCAAGACAGCAACTAAGCCTAATCTTCAGAAACCACGACCACGACGGCGATGGCCGCCTCAGCCCCACCGA
GCTCACCGAAGCCTTCCGCTACATTGGCGCCCTTCTGCCATCTTACAGAGCCTTCCAAGCTCTTTTACACACCGACTTTGACCGAGATGGATTCATTGACGAGAAGGAGT
TCGAATTGCTCCTCAATTATGTAGAGAAACGCAAATACACTGTCATTTGA
Protein sequenceShow/hide protein sequence
MSGKSKRYERARMSRQQLSLIFRNHDHDGDGRLSPTELTEAFRYIGALLPSYRAFQALLHTDFDRDGFIDEKEFELLLNYVEKRKYTVI