; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020667 (gene) of Snake gourd v1 genome

Gene IDTan0020667
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionzinc finger CCCH domain-containing protein 62-like
Genome locationLG06:1001071..1003891
RNA-Seq ExpressionTan0020667
SyntenyTan0020667
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013969.1 Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-5155.8Show/hide
Query:  IRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSA-----------SSMNREGHSKLYKSKVL-------FTILNGGGGEEKKYPE
        IR ++   EV D E I +A +DD+ P+   LNEN  K      +I ++            + + + G        VL         ILNGGG  EKKYPE
Subjt:  IRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSA-----------SSMNREGHSKLYKSKVL-------FTILNGGGGEEKKYPE

Query:  YSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQMKTMR-----
        YS  VNC+GDACMGDVVMFEQK+Y  YN+ SRSS  PSCGTR VAGRIVKESYGASKQ+HTFT      +GEK +PPLHP LIKGRNLY+MKTMR     
Subjt:  YSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQMKTMR-----

Query:  TGERQKVLMEKHARGSLTRSNREA
         GERQKVLMEKHARGSL RS REA
Subjt:  TGERQKVLMEKHARGSLTRSNREA

XP_004141817.1 zinc finger CCCH domain-containing protein 62 isoform X1 [Cucumis sativus]6.1e-5353.62Show/hide
Query:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSASSMN----------------REGHSK---LYKSKVLFTILN
        +N K   T  IR +    ++VD   IE+++IDD+ P+  ++NE   K      +I ++   +                 R   +K   + + K    ILN
Subjt:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSASSMN----------------REGHSK---LYKSKVLFTILN

Query:  GGGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLY
        GGG  EKKYPEYS IVNC+GDACMGD+VMFEQK+Y  YN+ SRSST PSCGTRTVAGRIVKESYG+SKQ+HTFT      +GEK +PPLHP LIKGRNLY
Subjt:  GGGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLY

Query:  QMKTMR-----TGERQKVLMEKHARGSLTRSNREA
        +MKTMR       ERQKVLMEKHARGSL RSNREA
Subjt:  QMKTMR-----TGERQKVLMEKHARGSLTRSNREA

XP_022145492.1 zinc finger CCCH domain-containing protein 62-like [Momordica charantia]1.5e-5153.42Show/hide
Query:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWF----------------CNIFRSASSMNREGHSKLYKSKV--LFTILNG
        SN K   T  IR ++     VD+E I EA++DD AP+ ++LNEN  K                     C ++   + +   G   +   ++     ILNG
Subjt:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWF----------------CNIFRSASSMNREGHSKLYKSKV--LFTILNG

Query:  GGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQ
        GG   KKYP+YS I++C+GDACMGDVVMFEQK+Y  YN+ SRSS  PSCGTRTVAGRIVKESYGASKQ+HTFT      +GEK +PPLHP LIKGRNLY+
Subjt:  GGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQ

Query:  MKTMR-----TGERQKVLMEKHARGSLTRSNREA
        MKT+R       ERQKVLMEKHARGSL RSNREA
Subjt:  MKTMR-----TGERQKVLMEKHARGSLTRSNREA

XP_022992241.1 zinc finger CCCH domain-containing protein 62-like [Cucurbita maxima]4.4e-5155.8Show/hide
Query:  IRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSA-----------SSMNREGHSKLYKSKVL-------FTILNGGGGEEKKYPE
        IR ++   EV D E I +A +DD+AP+   LNEN  K      +I ++            + + + G        VL         ILNGGG  EKKYPE
Subjt:  IRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSA-----------SSMNREGHSKLYKSKVL-------FTILNGGGGEEKKYPE

Query:  YSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQMKTMR-----
        YS  VNC+GDACMGDVVMFEQK+Y  YN+ SRSS  PSCGTR VAGRIVKESYGASKQ+HTFT      +GEK +PPLHP LIKGRNLY+MKT+R     
Subjt:  YSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQMKTMR-----

Query:  TGERQKVLMEKHARGSLTRSNREA
         GERQKVLMEKHARGSL RS REA
Subjt:  TGERQKVLMEKHARGSLTRSNREA

XP_031744267.1 zinc finger CCCH domain-containing protein 62 isoform X2 [Cucumis sativus]1.0e-5254.27Show/hide
Query:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFR----------SASSMNREGHSKLYKSKVL--------FTILNG
        +N K   T  IR +    ++VD   IE+++IDD+ P+  ++NE   K      +I +             S  R    +L  +K +          ILNG
Subjt:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFR----------SASSMNREGHSKLYKSKVL--------FTILNG

Query:  GGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQ
        GG  EKKYPEYS IVNC+GDACMGD+VMFEQK+Y  YN+ SRSST PSCGTRTVAGRIVKESYG+SKQ+HTFT      +GEK +PPLHP LIKGRNLY+
Subjt:  GGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQ

Query:  MKTMR-----TGERQKVLMEKHARGSLTRSNREA
        MKTMR       ERQKVLMEKHARGSL RSNREA
Subjt:  MKTMR-----TGERQKVLMEKHARGSLTRSNREA

TrEMBL top hitse value%identityAlignment
A0A0A0KCF3 Uncharacterized protein2.9e-5353.62Show/hide
Query:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSASSMN----------------REGHSK---LYKSKVLFTILN
        +N K   T  IR +    ++VD   IE+++IDD+ P+  ++NE   K      +I ++   +                 R   +K   + + K    ILN
Subjt:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSASSMN----------------REGHSK---LYKSKVLFTILN

Query:  GGGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLY
        GGG  EKKYPEYS IVNC+GDACMGD+VMFEQK+Y  YN+ SRSST PSCGTRTVAGRIVKESYG+SKQ+HTFT      +GEK +PPLHP LIKGRNLY
Subjt:  GGGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLY

Query:  QMKTMR-----TGERQKVLMEKHARGSLTRSNREA
        +MKTMR       ERQKVLMEKHARGSL RSNREA
Subjt:  QMKTMR-----TGERQKVLMEKHARGSLTRSNREA

A0A5A7V0Q9 Zinc finger CCCH domain-containing protein 62-like2.0e-4952.14Show/hide
Query:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSA-----------SSMNREG-------HSKLYKSKVLFTILNG
        +N K   T  IR ++   + +D+    +++IDD  P+  +LNE   K      +I ++            S + + G          + + K    ILNG
Subjt:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSA-----------SSMNREG-------HSKLYKSKVLFTILNG

Query:  GGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQ
        GG  EKKYPEYS IVNC+GDACMGD+VMFEQK+Y  YN+ SRSS  PSCGTRTVAGRIVKESYG+SKQ+HTFT      +GEK +PPLHP LIKGRNLY+
Subjt:  GGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQ

Query:  MKTMR-----TGERQKVLMEKHARGSLTRSNREA
        MKTMR       ERQKVL EKHARGSL RSNREA
Subjt:  MKTMR-----TGERQKVLMEKHARGSLTRSNREA

A0A6J1CWR5 zinc finger CCCH domain-containing protein 62-like7.3e-5253.42Show/hide
Query:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWF----------------CNIFRSASSMNREGHSKLYKSKV--LFTILNG
        SN K   T  IR ++     VD+E I EA++DD AP+ ++LNEN  K                     C ++   + +   G   +   ++     ILNG
Subjt:  SNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWF----------------CNIFRSASSMNREGHSKLYKSKV--LFTILNG

Query:  GGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQ
        GG   KKYP+YS I++C+GDACMGDVVMFEQK+Y  YN+ SRSS  PSCGTRTVAGRIVKESYGASKQ+HTFT      +GEK +PPLHP LIKGRNLY+
Subjt:  GGGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQ

Query:  MKTMR-----TGERQKVLMEKHARGSLTRSNREA
        MKT+R       ERQKVLMEKHARGSL RSNREA
Subjt:  MKTMR-----TGERQKVLMEKHARGSLTRSNREA

A0A6J1GQF0 zinc finger CCCH domain-containing protein 62-like2.8e-5155.8Show/hide
Query:  IRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSA-----------SSMNREGHSKLYKSKVL-------FTILNGGGGEEKKYPE
        IR ++   EV D E I +A +DD+ P+   LNEN  K      +I ++            + + + G        VL         ILNGGG  EKKYPE
Subjt:  IRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSA-----------SSMNREGHSKLYKSKVL-------FTILNGGGGEEKKYPE

Query:  YSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQMKTMR-----
        YS  VNC+GDACMGDVVMFEQK+Y  YN+ SRSS  PSCGTR VAGRIVKESYGASKQ+HTFT      +GEK +PPLHP LIKGRNLY+MKTMR     
Subjt:  YSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQMKTMR-----

Query:  TGERQKVLMEKHARGSLTRSNREA
         GERQKVLMEKHARGSL RS REA
Subjt:  TGERQKVLMEKHARGSLTRSNREA

A0A6J1JT10 zinc finger CCCH domain-containing protein 62-like2.1e-5155.8Show/hide
Query:  IRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSA-----------SSMNREGHSKLYKSKVL-------FTILNGGGGEEKKYPE
        IR ++   EV D E I +A +DD+AP+   LNEN  K      +I ++            + + + G        VL         ILNGGG  EKKYPE
Subjt:  IRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSA-----------SSMNREGHSKLYKSKVL-------FTILNGGGGEEKKYPE

Query:  YSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQMKTMR-----
        YS  VNC+GDACMGDVVMFEQK+Y  YN+ SRSS  PSCGTR VAGRIVKESYGASKQ+HTFT      +GEK +PPLHP LIKGRNLY+MKT+R     
Subjt:  YSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQMKTMR-----

Query:  TGERQKVLMEKHARGSLTRSNREA
         GERQKVLMEKHARGSL RS REA
Subjt:  TGERQKVLMEKHARGSLTRSNREA

SwissProt top hitse value%identityAlignment
Q338N2 Zinc finger CCCH domain-containing protein 622.0e-3055.81Show/hide
Query:  EKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQMKTM
        E KYP  S ++NCQGD+C GDVV+FEQ +Y R     R      CG RT AGRI+KESYG  KQ+HTFT      RG K  PPLHP LIKGRNLY+ KTM
Subjt:  EKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQMKTM

Query:  R-----TGERQKVLMEKHARGSLTRSNRE
        R       ER + L EKHARG + R  RE
Subjt:  R-----TGERQKVLMEKHARGSLTRSNRE

Arabidopsis top hitse value%identityAlignment
AT5G66840.1 SAP domain-containing protein1.4e-2646.88Show/hide
Query:  GGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQM
        G  E  YP+ S  +NC+GD C GD+V+F QK++ +Y    +S  +   G RTVAG++VKESYG +KQ+HTFT       G + +PPL+P L+KGRNLY++
Subjt:  GGEEKKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFT-----GRGEKLVPPLHPFLIKGRNLYQM

Query:  KTMR-----TGERQKVLMEKHARGSLTR
         T+R       +R KVL EKH RG+  R
Subjt:  KTMR-----TGERQKVLMEKHARGSLTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCCCATTATGTATGTAGCGCTTGGGAAGCAGAGCAAAGAATTTCGAAACCGATCCTCGTCGCTTCGAACTACAAGAACTACGAAACTGATTTCATTAGGTTGCG
TGCACTTCGCAGGGAAGTTGTAGATGTGGAACCGATCGAGGAAGCCGAGATAGATGATATGGCGCCAGATACTTCAGTACTAAATGAAAATGGCGTCAAACATTTTGAAT
GGTTCTGCAATATATTCCGCTCTGCTTCATCCATGAACAGAGAAGGCCACTCGAAACTTTATAAAAGTAAAGTTCTTTTCACGATTTTAAATGGTGGAGGGGGAGAAGAG
AAGAAATACCCAGAGTATAGCCTTATAGTGAATTGTCAAGGTGATGCCTGCATGGGTGATGTTGTTATGTTTGAACAAAAACTATATGGAAGGTACAATATGACATCTAG
GAGCTCCACAGTTCCTTCATGTGGAACAAGAACGGTTGCAGGTCGCATTGTGAAAGAAAGTTATGGTGCTTCTAAACAGAAACATACATTTACGGGTAGGGGTGAGAAAC
TAGTTCCTCCACTTCATCCCTTTTTAATCAAGGGCCGAAACCTTTATCAGATGAAAACTATGAGGACAGGAGAAAGGCAGAAAGTTTTAATGGAAAAACATGCTAGAGGA
TCACTTACAAGATCAAATAGGGAAGCACATGGACAAAATGAATATCAACATGCGCAAGAAAGCTACAAGGCAACAACAATGTCGTTATTATGCTGTAAGTTCTCACATGA
AATGGTAGAAGATTTTGTCCCGTCGGACAAAGAAAGATGGTGCCATCATCACATGCATCAAAATGTTCGACTTTGTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCCCCATTATGTATGTAGCGCTTGGGAAGCAGAGCAAAGAATTTCGAAACCGATCCTCGTCGCTTCGAACTACAAGAACTACGAAACTGATTTCATTAGGTTGCG
TGCACTTCGCAGGGAAGTTGTAGATGTGGAACCGATCGAGGAAGCCGAGATAGATGATATGGCGCCAGATACTTCAGTACTAAATGAAAATGGCGTCAAACATTTTGAAT
GGTTCTGCAATATATTCCGCTCTGCTTCATCCATGAACAGAGAAGGCCACTCGAAACTTTATAAAAGTAAAGTTCTTTTCACGATTTTAAATGGTGGAGGGGGAGAAGAG
AAGAAATACCCAGAGTATAGCCTTATAGTGAATTGTCAAGGTGATGCCTGCATGGGTGATGTTGTTATGTTTGAACAAAAACTATATGGAAGGTACAATATGACATCTAG
GAGCTCCACAGTTCCTTCATGTGGAACAAGAACGGTTGCAGGTCGCATTGTGAAAGAAAGTTATGGTGCTTCTAAACAGAAACATACATTTACGGGTAGGGGTGAGAAAC
TAGTTCCTCCACTTCATCCCTTTTTAATCAAGGGCCGAAACCTTTATCAGATGAAAACTATGAGGACAGGAGAAAGGCAGAAAGTTTTAATGGAAAAACATGCTAGAGGA
TCACTTACAAGATCAAATAGGGAAGCACATGGACAAAATGAATATCAACATGCGCAAGAAAGCTACAAGGCAACAACAATGTCGTTATTATGCTGTAAGTTCTCACATGA
AATGGTAGAAGATTTTGTCCCGTCGGACAAAGAAAGATGGTGCCATCATCACATGCATCAAAATGTTCGACTTTGTCGATGATGAAGATATGTGTACAACTCTGATAGAA
TTAGGGTGGGAATTTTGTTTTTTGTTTCGAAAAGTACCGAGTGACAATGAGTTCTTATATTTGAATAGGTTGCCTATGTAATTTCTCTGTGAACTCATCCAG
Protein sequenceShow/hide protein sequence
MIPHYVCSAWEAEQRISKPILVASNYKNYETDFIRLRALRREVVDVEPIEEAEIDDMAPDTSVLNENGVKHFEWFCNIFRSASSMNREGHSKLYKSKVLFTILNGGGGEE
KKYPEYSLIVNCQGDACMGDVVMFEQKLYGRYNMTSRSSTVPSCGTRTVAGRIVKESYGASKQKHTFTGRGEKLVPPLHPFLIKGRNLYQMKTMRTGERQKVLMEKHARG
SLTRSNREAHGQNEYQHAQESYKATTMSLLCCKFSHEMVEDFVPSDKERWCHHHMHQNVRLCR