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Tan0020681 (gene) of Snake gourd v1 genome

Gene IDTan0020681
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationLG10:68164569..68171701
RNA-Seq ExpressionTan0020681
SyntenyTan0020681
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]7.8e-1660.27Show/hide
Query:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGT
        TK L K+H DR+VEIEEQLL+LREVPD +R +E R+DE +EK  EID VN R+D LP++++++RVETLE + T
Subjt:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGT

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]6.0e-1659.46Show/hide
Query:  ATKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGT
        ATK L K+H DR+VEIEEQLL+LREVPD++R +E R+DE +EK  EID VN R+D LP++++++RVET E + T
Subjt:  ATKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGT

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]3.5e-1653.93Show/hide
Query:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLA
        TK LGK+H DR+VEIEE+LLFLRE+PD +R++E R+DE++ K   IDVVN R+D L ++EL LRVETLED+   T +       + S+A
Subjt:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLA

XP_022950197.1 uncharacterized protein LOC111453333 [Cucurbita moschata]6.2e-1345.74Show/hide
Query:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLAPTSGK
        TKS  KA +DR+  IEE++LFL+EVPDT+R +E R+ E++EK+ ++D +  RLD LP+ EL  RV +LE+R   T S + +  P  S+A   G+
Subjt:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLAPTSGK

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]6.2e-1345.74Show/hide
Query:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLAPTSGK
        TKS  KA +DR+  IEE++LFL+EVPDT+R +E R+ E++EK+ ++D +  RLD LP+ EL  RV +LE+R   T S + +  P  S+A   G+
Subjt:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLAPTSGK

TrEMBL top hitse value%identityAlignment
A0A6J1D906 Reverse transcriptase3.8e-1660.27Show/hide
Query:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGT
        TK L K+H DR+VEIEEQLL+LREVPD +R +E R+DE +EK  EID VN R+D LP++++++RVETLE + T
Subjt:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGT

A0A6J1DK29 uncharacterized protein LOC1110218292.9e-1659.46Show/hide
Query:  ATKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGT
        ATK L K+H DR+VEIEEQLL+LREVPD++R +E R+DE +EK  EID VN R+D LP++++++RVET E + T
Subjt:  ATKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGT

A0A6J1DLQ6 uncharacterized protein LOC1110223201.7e-1653.93Show/hide
Query:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLA
        TK LGK+H DR+VEIEE+LLFLRE+PD +R++E R+DE++ K   IDVVN R+D L ++EL LRVETLED+   T +       + S+A
Subjt:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLA

A0A6J1GE48 uncharacterized protein LOC1114533333.0e-1345.74Show/hide
Query:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLAPTSGK
        TKS  KA +DR+  IEE++LFL+EVPDT+R +E R+ E++EK+ ++D +  RLD LP+ EL  RV +LE+R   T S + +  P  S+A   G+
Subjt:  TKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLAPTSGK

A0A6J1IDF7 uncharacterized protein LOC1114742153.9e-1346.32Show/hide
Query:  ATKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLAPTSGK
        ATKS  KA +DR+  IEE++LFL+EVPDT+  +E R+ E++EK+ EID +  RLD LP+ EL  +V +LE+R   T S + +  P  S+A   G+
Subjt:  ATKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGRLDALPVKELSLRVETLEDRGTITISRRNARQPAKSLAPTSGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTCGAGGCTCGAGATGGCATCATTATTTATCAGTGGGACCCGATAGTTTCCGTTGGCTCGATATTTGCCTGTTATGTCCCAGTAAGCATTATAATGGCTCGAA
AAGCTTTGATTTCCGATGTTTGCTCCCAGTAAGAAAAGAACCTCGCCCAAGGTCCGACGAAGCCACAAAAAGTTTGGGCAAGGCCCATAGTGACCGAATGGTTGAAATCG
AAGAACAATTGTTGTTCTTGAGGGAAGTCCCTGATACGGTTCGACATATTGAGCGTCGGATCGATGAGATGACAGAGAAACTTACTGAGATCGACGTGGTTAATGGTCGG
CTAGACGCATTACCCGTCAAAGAGTTGTCCCTGAGGGTAGAGACCCTAGAAGACAGAGGTACGATAACTATATCAAGACGTAATGCCAGACAGCCTGCCAAAAGCCTTGC
CCCCACATCGGGCAAAGCCACCTGCCAAAAACGCATATCGTATGGCACCACCAGAATTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTCGAGGCTCGAGATGGCATCATTATTTATCAGTGGGACCCGATAGTTTCCGTTGGCTCGATATTTGCCTGTTATGTCCCAGTAAGCATTATAATGGCTCGAA
AAGCTTTGATTTCCGATGTTTGCTCCCAGTAAGAAAAGAACCTCGCCCAAGGTCCGACGAAGCCACAAAAAGTTTGGGCAAGGCCCATAGTGACCGAATGGTTGAAATCG
AAGAACAATTGTTGTTCTTGAGGGAAGTCCCTGATACGGTTCGACATATTGAGCGTCGGATCGATGAGATGACAGAGAAACTTACTGAGATCGACGTGGTTAATGGTCGG
CTAGACGCATTACCCGTCAAAGAGTTGTCCCTGAGGGTAGAGACCCTAGAAGACAGAGGTACGATAACTATATCAAGACGTAATGCCAGACAGCCTGCCAAAAGCCTTGC
CCCCACATCGGGCAAAGCCACCTGCCAAAAACGCATATCGTATGGCACCACCAGAATTGGTTGA
Protein sequenceShow/hide protein sequence
MTSRGSRWHHYLSVGPDSFRWLDICLLCPSKHYNGSKSFDFRCLLPVRKEPRPRSDEATKSLGKAHSDRMVEIEEQLLFLREVPDTVRHIERRIDEMTEKLTEIDVVNGR
LDALPVKELSLRVETLEDRGTITISRRNARQPAKSLAPTSGKATCQKRISYGTTRIG