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Tan0020731 (gene) of Snake gourd v1 genome

Gene IDTan0020731
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG06:79456992..79457859
RNA-Seq ExpressionTan0020731
SyntenyTan0020731
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575081.1 hypothetical protein SDJN03_25720, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2071.25Show/hide
Query:  APRADLAKIGREGFELIDKFFDRAPAGRRAA--ATARPALPQAPCRVEQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWR
        A R DLAKIGREGF+LID++F RAPA RRAA  A ARPALPQAPC+ EQPP KK+EK  V ++  QVAK RGGIVI TWR
Subjt:  APRADLAKIGREGFELIDKFFDRAPAGRRAA--ATARPALPQAPCRVEQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWR

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1969.23Show/hide
Query:  APRADLAKIGREGFELIDKFFDRAPAGRRAAATARPALPQAPCRVEQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWR
        APRADLAKIGREGFELID++F R PA RR  A ARPALPQAPC+ EQPP K +EK  V ++  QVA+ RGG+VI TWR
Subjt:  APRADLAKIGREGFELIDKFFDRAPAGRRAAATARPALPQAPCRVEQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWR

KGN47421.1 hypothetical protein Csa_021737 [Cucumis sativus]2.8e-1559.38Show/hide
Query:  MGLRDREIRAPRADLAKIGREGFELIDKFFDRA--PAGRR--AAATARPALPQAPCRV-EQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWRGYAK
        MG R+REI    A+LA+IG EGF+LIDKFF RA    GRR  AA   RPA  Q P +V EQPP K KEK    ++S+ +AKTRGGIVI TWR YAK
Subjt:  MGLRDREIRAPRADLAKIGREGFELIDKFFDRA--PAGRR--AAATARPALPQAPCRV-EQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWRGYAK

KGN47422.1 hypothetical protein Csa_021740 [Cucumis sativus]8.3e-2063.04Show/hide
Query:  LRDREIRAPRADLAKIGREGFELIDKFFDRAP---AGRRAAATARPALPQAPCRVEQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWRGYAK
        LR+REIR  R DLAKIGREGF++ID++F RA    A R AA TARPALPQ P + EQPP  +KEKP   ++S+QVAK  GG VI TWR YAK
Subjt:  LRDREIRAPRADLAKIGREGFELIDKFFDRAP---AGRRAAATARPALPQAPCRVEQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWRGYAK

XP_023548315.1 multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]1.2e-1369.7Show/hide
Query:  APRADLAKIGREGFELIDKFFDRAPAGRRAAATA--RPALPQAPCRVEQPPMKKKEKPAVTMSSEQ
        APRADLAKIGREGFELID++F R PA RRAAA A  RPALPQAPC+ EQPP K +EK  V ++  Q
Subjt:  APRADLAKIGREGFELIDKFFDRAPAGRRAAATA--RPALPQAPCRVEQPPMKKKEKPAVTMSSEQ

TrEMBL top hitse value%identityAlignment
A0A0A0KG95 Uncharacterized protein4.0e-2063.04Show/hide
Query:  LRDREIRAPRADLAKIGREGFELIDKFFDRAP---AGRRAAATARPALPQAPCRVEQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWRGYAK
        LR+REIR  R DLAKIGREGF++ID++F RA    A R AA TARPALPQ P + EQPP  +KEKP   ++S+QVAK  GG VI TWR YAK
Subjt:  LRDREIRAPRADLAKIGREGFELIDKFFDRAP---AGRRAAATARPALPQAPCRVEQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWRGYAK

A0A0A0KI19 Uncharacterized protein1.3e-1559.38Show/hide
Query:  MGLRDREIRAPRADLAKIGREGFELIDKFFDRA--PAGRR--AAATARPALPQAPCRV-EQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWRGYAK
        MG R+REI    A+LA+IG EGF+LIDKFF RA    GRR  AA   RPA  Q P +V EQPP K KEK    ++S+ +AKTRGGIVI TWR YAK
Subjt:  MGLRDREIRAPRADLAKIGREGFELIDKFFDRA--PAGRR--AAATARPALPQAPCRV-EQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWRGYAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTGAGAGATAGAGAAATTAGGGCTCCTCGTGCTGACTTGGCAAAGATTGGGAGGGAAGGATTTGAACTAATTGACAAATTCTTCGACCGAGCGCCGGCGGGGAG
ACGGGCGGCGGCTACGGCGAGGCCTGCTCTACCGCAGGCGCCGTGTAGAGTAGAACAACCTCCGATGAAGAAGAAAGAAAAACCGGCAGTGACCATGAGCTCCGAACAGG
TGGCCAAAACCCGCGGCGGAATCGTGATAAAAACTTGGCGTGGGTATGCAAAATAA
mRNA sequenceShow/hide mRNA sequence
GCTCTATATAAATGAACCAACCCACATGAAAGCTTCACAAACCAACAAAGCAATCAAAAACAAAGTTCAGAAATAAAAACTTTCTTTTTTTTTCTTTTGGAAATTATGGG
TCTGAGAGATAGAGAAATTAGGGCTCCTCGTGCTGACTTGGCAAAGATTGGGAGGGAAGGATTTGAACTAATTGACAAATTCTTCGACCGAGCGCCGGCGGGGAGACGGG
CGGCGGCTACGGCGAGGCCTGCTCTACCGCAGGCGCCGTGTAGAGTAGAACAACCTCCGATGAAGAAGAAAGAAAAACCGGCAGTGACCATGAGCTCCGAACAGGTGGCC
AAAACCCGCGGCGGAATCGTGATAAAAACTTGGCGTGGGTATGCAAAATAAATATAGCTCTGTTTCTGATCTAGAAGACTAGAACTAGAGCTGGTGCTCGTAATATAAAT
ATATATAAATATGGGTACTTAACTGCAATATATATATTATGAAATTGTAGTTCTAGTTCTAGTTTGCTTTCTTGCATGCTTTGTAGTATCAATATATCATTATCAAAGTA
TGTATTATGAAGGAACTACTGCTTAGCTTATGGTGAAATCTCTCTCTACAAAACTCTACCCAAAAAAGAAAAAAGAAAAGAAAACTAATTTAATCTACAAGATGTATTAA
TATTTATGTTAAAAAAAATACTGCTTCCCTATTAGGTTCTAGTCCTTGAACTTTGATTTACAACCATTTAGTTTTCATTTAAATTTGTAATAATCTAATATGTAATGATT
TCTTACATTTGTATGTATATGAATAAATTGAGTGGGGACCTATATGTTTTTATAAACTAAAAAAACTTCATAAAGATCCATGCTTAATTGTGATGGAC
Protein sequenceShow/hide protein sequence
MGLRDREIRAPRADLAKIGREGFELIDKFFDRAPAGRRAAATARPALPQAPCRVEQPPMKKKEKPAVTMSSEQVAKTRGGIVIKTWRGYAK