| GenBank top hits | e value | %identity | Alignment |
|---|
| KAD4981935.1 hypothetical protein E3N88_18606 [Mikania micrantha] | 3.7e-169 | 69.54 | Show/hide |
Query: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
ALEPAWITSRQIEAGRRAMT NARRGGKIWVRIFPDKPVT+RP ETRMGSGKG PEYWVAVVKP DNSGARELMCIRIIGASNRRYAHIGDVIV
Subjt: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
Query: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI---------------GSRRNGRISSRKSTRR
AVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTR+FGAIAREL+Q G + I T
Subjt: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI---------------GSRRNGRISSRKSTRR
Query: IPKGVIHVQASFNNTIV----------------------------TVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIK
+P G+ V+ N I+ + DVRGRV+SWSSAGTCGF+GTRRGTPFA QTAA NAIRAVVDQGMQRAEVMIK
Subjt: IPKGVIHVQASFNNTIV----------------------------TVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIK
Query: GPGLGRDAALRAIRRS-----------------------GILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNL
GPGL RDAALRAIRRS + S + GQADTIGIAMR+ALLGEIEGTCITRAKSEKI H Y TI+GIQESVHEILMNL
Subjt: GPGLGRDAALRAIRRS-----------------------GILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNL
Query: KEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQD
KEIVLRSNLYGT +ASICV+GPG VTAQDIILPP VEIVDNTQHIA+LTEPI L I L+IE+NRGY I+ PN FQD
Subjt: KEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQD
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| KAD7117051.1 hypothetical protein E3N88_04319 [Mikania micrantha] | 5.5e-165 | 70.07 | Show/hide |
Query: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKP DNSGARELMCIRIIGASNRRYAHIGDVIV
Subjt: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
Query: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI-----------GSRRNGRISSRKSTRRIPKG
AVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDN AVVIDQEGNPKGTR FGAIAREL+Q GSR GRI SRKS R+IPKG
Subjt: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI-----------GSRRNGRISSRKSTRRIPKG
Query: VIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS----------------
VIH+QASFNNTIVTVTDVRG+V+SWSSAGTCGF+GTRRGTPFAAQTAA NAIRAVVDQGMQRAEVMIKGPGLGRDA LRAIRRS
Subjt: VIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS----------------
Query: -------GILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIIL
+ S + GQADTIGIAMR+A C+ ++K ASICV+GPG VTAQDIIL
Subjt: -------GILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIIL
Query: PPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
PP VEIVDNTQHIA+LTEPI L I L+IE+NRGY I+ PN FQD SYP+D +FMPVRNANH
Subjt: PPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| KAF8376862.1 hypothetical protein HHK36_031458 [Tetracentron sinense] | 6.7e-163 | 76.98 | Show/hide |
Query: MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ-----------
MCIRIIGASNRRYAHIGDVIVAVIK+AVPN PLERSEVIRAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTR+FGAIAREL+Q
Subjt: MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ-----------
Query: --------------------IGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQG
IGSR NGRI SRK++RRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGN IR VVDQG
Subjt: --------------------IGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQG
Query: MQRAEVMIKGPGLGRDAALRAIRRSGILFSFIRD-------------------------GQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGI
MQRAEVMIKGPGLGRDAALRAIRRSGIL SF+RD GQADTIGIAMR+ALLGEIEGTCITRAKSEKIPH Y TIVGI
Subjt: MQRAEVMIKGPGLGRDAALRAIRRSGILFSFIRD-------------------------GQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGI
Query: QESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVR
+ESV EIL+NLKEIVLRSNLYGT DASICV+GPG TAQDII PPSVEIVD TQHIA+LTEP++LCI L+IER+RGYRI+TPNN QD SYP+DA+FMPVR
Subjt: QESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVR
Query: NANH
NA+H
Subjt: NANH
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| KAF9660677.1 hypothetical protein SADUNF_SadunfPtG0000200 [Salix dunnii] | 1.8e-160 | 68.13 | Show/hide |
Query: MKGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP----------------D
MKG+SYRGNRICFGRYA+QALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVTLRP+ETRMGSGKGSPEYWVAVVKP D
Subjt: MKGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP----------------D
Query: NSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQIGSR
NSGARELMCIRIIG SNRRYAHIGDVI+AVIK+AVPN+PLERSEVIRAVIVRT KELKR+N
Subjt: NSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQIGSR
Query: RNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRR
G CGF+GTRRGTPFAAQTAAGNAIR VVDQGMQRAEVMIKGPGLGRDAALRAIRR
Subjt: RNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRR
Query: SGILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEI
S GQADTIGIAMR+ALLGEIEGTCITRAKS+KIPH + TI GIQES+HEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEI
Subjt: SGILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEI
Query: VDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
+DNTQHIA+L EPI+L I L+IERNRGY +++P NFQD SY +DA+FMPVRNANH
Subjt: VDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| RDY14681.1 DNA-directed RNA polymerase subunit alpha, partial [Mucuna pruriens] | 3.0e-203 | 78.48 | Show/hide |
Query: MKGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-----------------
MKG+SYRGN ICFGRYA+QALEPAWITSRQIEAGRRAM+RN RRGG+IWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKP
Subjt: MKGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-----------------
Query: ------------------DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNP
+GARELMCIRI+GASNRRYA+IGD++VAVIK+AVPNT LERSEVIRAVIVRTCKELKR NG+II+YDDNAAVVIDQEGNP
Subjt: ------------------DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNP
Query: KGTRIFGAIARELKQIGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAE
KGTRIF AIAREL+Q+ + ++ + TR+IPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPF AQTAAGNAIR V DQGMQRAE
Subjt: KGTRIFGAIARELKQIGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAE
Query: VMIKGPGLGRDAALRAIRRSGILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICV
VMIKGPGLGRDAALRAIRRS GQADTIGIAMR+ LLGEIEGTCITRAKSEKIPH Y TIVGIQESVHEILMNLKEIVLRSNLYGT+DASIC
Subjt: VMIKGPGLGRDAALRAIRRSGILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICV
Query: KGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
KGPG VTAQDIILPPSVEIVDNTQHIAN+TE +NLCI L+IERNRGYRI+T NFQD SYP+DA+FMPVRN NH
Subjt: KGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A371II16 Plastid-encoded RNA polymerase subunit alpha (Fragment) | 1.4e-203 | 78.48 | Show/hide |
Query: MKGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-----------------
MKG+SYRGN ICFGRYA+QALEPAWITSRQIEAGRRAM+RN RRGG+IWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKP
Subjt: MKGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-----------------
Query: ------------------DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNP
+GARELMCIRI+GASNRRYA+IGD++VAVIK+AVPNT LERSEVIRAVIVRTCKELKR NG+II+YDDNAAVVIDQEGNP
Subjt: ------------------DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNP
Query: KGTRIFGAIARELKQIGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAE
KGTRIF AIAREL+Q+ + ++ + TR+IPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPF AQTAAGNAIR V DQGMQRAE
Subjt: KGTRIFGAIARELKQIGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAE
Query: VMIKGPGLGRDAALRAIRRSGILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICV
VMIKGPGLGRDAALRAIRRS GQADTIGIAMR+ LLGEIEGTCITRAKSEKIPH Y TIVGIQESVHEILMNLKEIVLRSNLYGT+DASIC
Subjt: VMIKGPGLGRDAALRAIRRSGILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICV
Query: KGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
KGPG VTAQDIILPPSVEIVDNTQHIAN+TE +NLCI L+IERNRGYRI+T NFQD SYP+DA+FMPVRN NH
Subjt: KGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| A0A5N6N9A8 S1-like domain-containing protein | 1.9e-142 | 67.06 | Show/hide |
Query: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI--
DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTR+FGAIAREL+Q
Subjt: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI--
Query: -------------GSRRNGRISSRKSTRRIPKGVIHVQASFNNTIV----------------------------TVTDVRGRVISWSSAGTCGFKGTRRG
G + I T +P G+ V+ N I+ + DVRGRV+SWSSAGTCGF+GTRRG
Subjt: -------------GSRRNGRISSRKSTRRIPKGVIHVQASFNNTIV----------------------------TVTDVRGRVISWSSAGTCGFKGTRRG
Query: TPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS-----------------------GILFSFIRDGQADTIGIAMRKALLGEIEGTCI
TPFAAQTAA NAIRAVVDQGMQRAEVMIKGPGLGRDA LRAIRRS + S + GQADTIGIAMR+ALLGEIEGTCI
Subjt: TPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS-----------------------GILFSFIRDGQADTIGIAMRKALLGEIEGTCI
Query: TRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTP
TRAK EKI H Y TI+GIQESVHEILMNLKEIVLRSNLYGT +ASICV+GPG VTAQDIILPP V IVDNTQHIA+LTEPI L I L+IE+NRGY I+ P
Subjt: TRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTP
Query: NNFQDVSYPVDAIFMPVRNANH
N FQD SYP+D +FMPVRNANH
Subjt: NNFQDVSYPVDAIFMPVRNANH
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| A0A5N6NML1 S1-like domain-containing protein | 1.8e-169 | 69.54 | Show/hide |
Query: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
ALEPAWITSRQIEAGRRAMT NARRGGKIWVRIFPDKPVT+RP ETRMGSGKG PEYWVAVVKP DNSGARELMCIRIIGASNRRYAHIGDVIV
Subjt: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
Query: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI---------------GSRRNGRISSRKSTRR
AVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTR+FGAIAREL+Q G + I T
Subjt: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI---------------GSRRNGRISSRKSTRR
Query: IPKGVIHVQASFNNTIV----------------------------TVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIK
+P G+ V+ N I+ + DVRGRV+SWSSAGTCGF+GTRRGTPFA QTAA NAIRAVVDQGMQRAEVMIK
Subjt: IPKGVIHVQASFNNTIV----------------------------TVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIK
Query: GPGLGRDAALRAIRRS-----------------------GILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNL
GPGL RDAALRAIRRS + S + GQADTIGIAMR+ALLGEIEGTCITRAKSEKI H Y TI+GIQESVHEILMNL
Subjt: GPGLGRDAALRAIRRS-----------------------GILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNL
Query: KEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQD
KEIVLRSNLYGT +ASICV+GPG VTAQDIILPP VEIVDNTQHIA+LTEPI L I L+IE+NRGY I+ PN FQD
Subjt: KEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQD
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| A0A5N6PW93 Ribosomal_L2_C domain-containing protein | 2.7e-165 | 70.07 | Show/hide |
Query: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKP DNSGARELMCIRIIGASNRRYAHIGDVIV
Subjt: ALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP-------DNSGARELMCIRIIGASNRRYAHIGDVIV
Query: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI-----------GSRRNGRISSRKSTRRIPKG
AVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDN AVVIDQEGNPKGTR FGAIAREL+Q GSR GRI SRKS R+IPKG
Subjt: AVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI-----------GSRRNGRISSRKSTRRIPKG
Query: VIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS----------------
VIH+QASFNNTIVTVTDVRG+V+SWSSAGTCGF+GTRRGTPFAAQTAA NAIRAVVDQGMQRAEVMIKGPGLGRDA LRAIRRS
Subjt: VIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRS----------------
Query: -------GILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIIL
+ S + GQADTIGIAMR+A C+ ++K ASICV+GPG VTAQDIIL
Subjt: -------GILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIIL
Query: PPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
PP VEIVDNTQHIA+LTEPI L I L+IE+NRGY I+ PN FQD SYP+D +FMPVRNANH
Subjt: PPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| A0A6A5PE04 RPOLD domain-containing protein | 1.6e-146 | 75.2 | Show/hide |
Query: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI--
+NSGARELMCIRIIGASN+RY +IGD++VAVIK+AVPNTPLERSEVIR VIVRTCKELKR NG+II Y+DNAAV+IDQEGNPKGTRIFGA+AREL+Q+
Subjt: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI--
Query: -----------------GSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRA
GS +NGRI SRK R+IPKGVIHVQASFNNTIVTVTDVRG VIS SS GTCGFKGTRRG FAAQT NAI V DQGM+RA
Subjt: -----------------GSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRA
Query: EVMIKGPGLGRDAALRAIRRSGILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASIC
EVMIKGPGLG DAALRAIRRS GQADTIGIAMR+ LLGEIEGTCITRAKSEKIPH Y T++GIQESVH+ILMNLKEIVLRSNLYGTR+ SI
Subjt: EVMIKGPGLGRDAALRAIRRSGILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASIC
Query: VKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
VKGP VTAQDI+LPPSVEIVDNTQHIANLTEPIN I L+I N YRI+T FQD SYP+DA+FM VRN NH
Subjt: VKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| SwissProt top hits | e value | %identity | Alignment |
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| Q09WY5 DNA-directed RNA polymerase subunit alpha | 1.5e-72 | 92.41 | Show/hide |
Query: GQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANL
GQADTIGIAMR+ALLGEIEGTCITRAKSEKIPH Y TIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPG VTAQDIILPPSVEIVDNTQHIANL
Subjt: GQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANL
Query: TEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
TEPI LCIEL+IERNRGYRI+TPNNFQ+ SYP+DA+FMPVRNANH
Subjt: TEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| Q2PMQ3 DNA-directed RNA polymerase subunit alpha | 2.6e-69 | 84.21 | Show/hide |
Query: LFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
+ S + GQADTIGIAMR+ LLGEIEGTCITR KSEKIPH Y TI+GI+ESVHEILMNLKEIVLRSNLYGTRDASIC KGPG VTAQDIILPPSVEIVDN
Subjt: LFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
Query: TQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
TQHIAN+TEP+NLCIELKIERNRGYRI+T NFQD SYP+DA FMPVRN NH
Subjt: TQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| Q49KW6 DNA-directed RNA polymerase subunit alpha | 2.4e-70 | 86.18 | Show/hide |
Query: LFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
+ S + GQADTIGIAMR+ALLGEIEGTCITRAK EKIPH Y TIVGIQESVHEILMNLKEIVLRSNLYGTR+ASICVKGPGCVTAQDIILP SVEIVDN
Subjt: LFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
Query: TQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
TQ+IANLTEPINLCI L+IERNRGY I+TP NFQD SYP+DA+FMPVRNANH
Subjt: TQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| Q4VZK3 DNA-directed RNA polymerase subunit alpha | 1.2e-74 | 90.79 | Show/hide |
Query: LFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
+ S + GQ DTIGIAMRKALLGEIEGTCITRAKSEKIPH Y TIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
Subjt: LFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
Query: TQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
TQHIANL EPINLCIELKIERNRGY IQTPNNFQD SYP+DAIFMPVRN NH
Subjt: TQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| Q9MTJ3 DNA-directed RNA polymerase subunit alpha | 4.5e-69 | 83.55 | Show/hide |
Query: LFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
+ S + GQADTIGIAMR+ALLGEIEGTCITRAK EKIPH Y TIVGIQESVHEILMNLKEIVLRSNLYGT +ASICVKGPGCVTAQDI+LPPSVEI+DN
Subjt: LFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
Query: TQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
TQHIA+L EPI+LCI L+IERNRGY I++PNNFQD SYP+DA+FMPVRNANH
Subjt: TQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G28830.1 PLANT U-BOX 12 | 6.3e-26 | 71.95 | Show/hide |
Query: KGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP
KG+S +G IC RYA+Q LEPAWITSRQIEAGRRAMTRN RG + V IF DKPVT+RP ETRMG GKG+P +WVAVVKP
Subjt: KGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP
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| ATCG00740.1 RNA polymerase subunit alpha | 6.2e-66 | 78.29 | Show/hide |
Query: LFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
+ S + GQADTIGIAMR+ALLGEIEGTCITRAKSE IPH Y I GIQESVHEILMNL EIVLRSNLYGTR+A ICV+GPG +TA+DIILPP+VEI+DN
Subjt: LFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDN
Query: TQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
TQHIA LTEPI+LCIELKIERNRGY ++ NNF+D SYP+DA+FMPV NANH
Subjt: TQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANH
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| ATCG00750.1 ribosomal protein S11 | 1.3e-52 | 86.78 | Show/hide |
Query: IARELKQIGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGL
+A+ + +IGSR+N R SRK+ RRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGF+GTRRGTPFAAQTAAGNAIRAVVDQGMQRAEV IKGPGL
Subjt: IARELKQIGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGL
Query: GRDAALRAIRRSGILFSFIRD
GRDAALRAIRRSGIL SF+RD
Subjt: GRDAALRAIRRSGILFSFIRD
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| ATCG00780.1 ribosomal protein L14 | 7.2e-46 | 91.84 | Show/hide |
Query: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI
DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+A+PNTPLERSEVIRAVIVRTCKELKR NG IIRYDDNAAVVIDQEGNPKGTR+FGAI REL+Q+
Subjt: DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQI
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| ATCG00790.1 ribosomal protein L16 | 1.5e-40 | 90.36 | Show/hide |
Query: MKGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP
+KG+S RGNRICFGRYA+Q LEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKP
Subjt: MKGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKP
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