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Tan0020770 (gene) of Snake gourd v1 genome

Gene IDTan0020770
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAuxin-responsive protein
Genome locationLG02:6829589..6834532
RNA-Seq ExpressionTan0020770
SyntenyTan0020770
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049693.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]2.9e-1062.96Show/hide
Query:  IRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        IRLPR + VK+ FRRVAS + ESS +SN V +GYIP+YVGEE++++Y VP+SYL
Subjt:  IRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

KAB1207562.1 Auxin-induced protein X10A [Morella rubra]2.7e-0852.63Show/hide
Query:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA
        M  R+P  VH KQ F+R  +NA ++ S +  VP+GY+P+YVGE QKK++V+PISYL+
Subjt:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA

XP_016900453.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]2.9e-1062.96Show/hide
Query:  IRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        IRLPR + VK+ FRRVAS + ESS +SN V +GYIP+YVGEE++++Y VP+SYL
Subjt:  IRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

XP_038887252.1 indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]1.6e-1678.57Show/hide
Query:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        M IRLPR +HVKQ FRRVA N+VESSS+ N++PRGYIP+YVGEEQKK+YVVPISYL
Subjt:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

XP_042981537.1 auxin-responsive protein SAUR21-like [Carya illinoinensis]4.6e-0851.79Show/hide
Query:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        MTIR+P  +HVKQ  RR   ++ E++S + +VP+GY  +YVGE+QKK++++PISYL
Subjt:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

TrEMBL top hitse value%identityAlignment
A0A1S4DWV1 auxin-responsive protein SAUR21-like1.4e-1062.96Show/hide
Query:  IRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        IRLPR + VK+ FRRVAS + ESS +SN V +GYIP+YVGEE++++Y VP+SYL
Subjt:  IRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

A0A2I4E7C9 auxin-responsive protein SAUR21-like8.4e-0851.79Show/hide
Query:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        M IR+P  +HVKQ  RR   ++ E++S + +VP+GY  +YVGE+QKK++V+PISYL
Subjt:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

A0A5D3CPE1 Auxin-responsive protein SAUR21-like1.4e-1062.96Show/hide
Query:  IRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        IRLPR + VK+ FRRVAS + ESS +SN V +GYIP+YVGEE++++Y VP+SYL
Subjt:  IRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

A0A6A1V448 Auxin-induced protein X10A1.3e-0852.63Show/hide
Query:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA
        M  R+P  VH KQ F+R  +NA ++ S +  VP+GY+P+YVGE QKK++V+PISYL+
Subjt:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA

A0A7J0FJT4 SAUR-like auxin-responsive protein family2.9e-0853.57Show/hide
Query:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        M IR+PR +H KQ FRR +S A ++ S +  VPRGY  +YVGE + K+++VPISYL
Subjt:  MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

SwissProt top hitse value%identityAlignment
Q9FJF9 Auxin-responsive protein SAUR214.1e-0442.5Show/hide
Query:  VASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA
        + +  + S S +++ P+G++ +YVGE QKK+Y+VP+SYL+
Subjt:  VASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA

Q9FJG0 Auxin-responsive protein SAUR205.4e-0453.12Show/hide
Query:  SSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        S++ +++ P+G++ +YVGE QKK+Y+VPISYL
Subjt:  SSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

Q9FJG1 Auxin-responsive protein SAUR199.2e-0448.48Show/hide
Query:  SSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA
        S++  ++ P+G++ +YVGE QKK+Y+VP+SYL+
Subjt:  SSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA

Arabidopsis top hitse value%identityAlignment
AT4G38825.1 SAUR-like auxin-responsive protein family6.6e-0544.74Show/hide
Query:  ASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        A    +  S++ S P+G++ +YVGE Q K+Y+VP+SYL
Subjt:  ASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

AT4G38840.1 SAUR-like auxin-responsive protein family8.3e-0847.37Show/hide
Query:  MTIRLPRAVH-VKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        M IR+PR +   KQ  R+    +  SSS S  VP+GY+ +YVGE+  K++VVP+SYL
Subjt:  MTIRLPRAVH-VKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

AT5G18010.1 SAUR-like auxin-responsive protein family6.6e-0548.48Show/hide
Query:  SSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA
        S++  ++ P+G++ +YVGE QKK+Y+VP+SYL+
Subjt:  SSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA

AT5G18020.1 SAUR-like auxin-responsive protein family3.8e-0553.12Show/hide
Query:  SSSISNSVPRGYIPIYVGEEQKKQYVVPISYL
        S++ +++ P+G++ +YVGE QKK+Y+VPISYL
Subjt:  SSSISNSVPRGYIPIYVGEEQKKQYVVPISYL

AT5G18030.1 SAUR-like auxin-responsive protein family2.9e-0542.5Show/hide
Query:  VASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA
        + +  + S S +++ P+G++ +YVGE QKK+Y+VP+SYL+
Subjt:  VASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATCAGACTACCTCGTGCTGTGCATGTCAAGCAGTTTTTTCGTCGAGTAGCTTCAAATGCTGTCGAATCTTCTTCGATATCCAACAGTGTTCCAAGAGGATACAT
TCCTATCTATGTTGGAGAGGAGCAAAAGAAGCAATATGTAGTACCAATTTCTTACTTAGCCATCATTCCAAAAGTTACTGATGCACAAATGAGGGGAGTGTTAGTATTTT
TCTCAAAACCGGGTGGTAAATTCATAAATACTTCTTCTTCAAGACAATTACTGTTTGTGCCAAGGAAACACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTATCAGACTACCTCGTGCTGTGCATGTCAAGCAGTTTTTTCGTCGAGTAGCTTCAAATGCTGTCGAATCTTCTTCGATATCCAACAGTGTTCCAAGAGGATACAT
TCCTATCTATGTTGGAGAGGAGCAAAAGAAGCAATATGTAGTACCAATTTCTTACTTAGCCATCATTCCAAAAGTTACTGATGCACAAATGAGGGGAGTGTTAGTATTTT
TCTCAAAACCGGGTGGTAAATTCATAAATACTTCTTCTTCAAGACAATTACTGTTTGTGCCAAGGAAACACTAG
Protein sequenceShow/hide protein sequence
MTIRLPRAVHVKQFFRRVASNAVESSSISNSVPRGYIPIYVGEEQKKQYVVPISYLAIIPKVTDAQMRGVLVFFSKPGGKFINTSSSRQLLFVPRKH