; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020786 (gene) of Snake gourd v1 genome

Gene IDTan0020786
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionhistone chaperone ASF1B-like
Genome locationLG11:1217262..1222965
RNA-Seq ExpressionTan0020786
SyntenyTan0020786
Gene Ontology termsGO:0006335 - DNA replication-dependent nucleosome assembly (biological process)
GO:0006336 - DNA replication-independent nucleosome assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0042393 - histone binding (molecular function)
InterPro domainsIPR006818 - Histone chaperone ASF1-like
IPR036747 - Histone chaperone ASF1-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051073.1 putative histone chaperone ASF1A [Cucumis melo var. makuwa]7.0e-10196.89Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSAVNITNVAVLDNPSPFSTPLQFEISYECLS LKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP
        YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETD +EQL ASPEHPS++QNP
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP

XP_004138628.1 probable histone chaperone ASF1A [Cucumis sativus]4.8e-10297.41Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSAVNITNVAVLDNPSPFSTPLQFEISYECLS LKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP
        YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETD +EQLPASPEHPS++QNP
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP

XP_016899380.1 PREDICTED: probable histone chaperone ASF1A [Cucumis melo]7.0e-10196.89Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSAVNITNVAVLDNPSPFSTPLQFEISYECLS LKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP
        YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETD +EQL ASPEHPS++QNP
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP

XP_022990954.1 histone chaperone ASF1B-like [Cucurbita maxima]3.1e-10196.89Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP
        YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPP NDPV AETD ++QLPASPEHPSDEQ P
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP

XP_038884219.1 probable histone chaperone ASF1A [Benincasa hispida]7.5e-10397.93Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSAVNITNVAVLDNPSPFSTPLQFEISYECLS LKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP
        YMGQEF+RVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETD +EQLPASPEHPSDEQNP
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP

TrEMBL top hitse value%identityAlignment
A0A0A0LMW6 Uncharacterized protein2.3e-10297.41Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSAVNITNVAVLDNPSPFSTPLQFEISYECLS LKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP
        YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETD +EQLPASPEHPS++QNP
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP

A0A1S4DUI4 probable histone chaperone ASF1A3.4e-10196.89Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSAVNITNVAVLDNPSPFSTPLQFEISYECLS LKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP
        YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETD +EQL ASPEHPS++QNP
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP

A0A5A7U5C5 Putative histone chaperone ASF1A3.4e-10196.89Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSAVNITNVAVLDNPSPFSTPLQFEISYECLS LKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP
        YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETD +EQL ASPEHPS++QNP
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP

A0A6J1GXI9 histone chaperone ASF1B-like4.4e-10196.37Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP
        YMGQEFIRVGYYVNNDYDDEQLREEPP KVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPP NDPV AETD ++QLPASPEHPSDEQ P
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP

A0A6J1JRI5 histone chaperone ASF1B-like1.5e-10196.89Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP
        YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPP NDPV AETD ++QLPASPEHPSDEQ P
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP

SwissProt top hitse value%identityAlignment
Q69DB9 Histone chaperone asf1a-A9.6e-5357.65Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        M+ V + NV VLDNPSPF  P QFEI++EC+  L  DLEWK+IYVGSAE E YDQ+L+ VLVGPV  G + FV QAD P+P  IP+ D +GVTV+L+TC+
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPV
        Y GQEFIRVGYYVNN+Y + +LRE PP K    ++QRNIL+  PRVT+F IN+   T    +  P   PV
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPV

Q6NY34 Histone chaperone asf1b-B2.8e-5259.17Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        M+ V + NVAVLDNPSPF  P QFEI++EC+  L  DLEWK+IYVGSAE E YDQ+L+ VLVGPV  G + FV QAD P+   IPE D +GVTV+L+TC+
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDP
        Y GQEFIR+GYYVNN+Y D +LRE PP K    ++QRNIL+  PRVT+F IN +  T D  E+  + DP
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDP

Q9C9M6 Probable histone chaperone ASF1A9.9e-7473.47Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSA+ ITNVAVL NP+PF +P QFEISYECL+ LK DLEWKLIYVGSAE ETYDQLLE VLVGPVNVGNYRFV QADPPDPSKI EEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPE---TNDSGEEPPSNDPVSAETDCEEQ-LPASPEHPSDEQN
        YMGQEF+RVGYYVNNDY+DEQL+EEPP KVLID+VQRNILSDKPRVTKFPI+F+PE   T  +   P  +D      + E Q LP     P  E++
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPE---TNDSGEEPPSNDPVSAETDCEEQ-LPASPEHPSDEQN

Q9LS09 Histone chaperone ASF1B1.7e-7374.48Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MS++NITNV VLDNP+PF  P QFEISYECL+ LK DLEWKLIYVGSAE ETYDQ+LE VLVGPVNVGNYRFVLQAD PDP KI EEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDS-GEEPPSNDPVSAETDCEEQLPASPEHPSDEQ
        YM QEFIRVGYYVNNDYDDEQLREEPP KVLID+VQRNIL+DKPRVTKFPINF+PE   + G+ P   +P  A++    + P   E P   Q
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDS-GEEPPSNDPVSAETDCEEQLPASPEHPSDEQ

Q9V464 Histone chaperone asf11.3e-5453.85Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        M+ V+ITNV VLDNPS F  P QFE+++EC+  LK DLEWK+IYVGSAE E +DQ+L+ + VGPV  G + FV QADPPD SKIPE D +GVT++LLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINF---YPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQN
        Y GQEF+RVGYYVNNDY D ++RE PP K L +++ RNIL+ KPRVT+F IN+   +   N +G E    D ++ +     +  ++  HP D+ +
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINF---YPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQN

Arabidopsis top hitse value%identityAlignment
AT1G66740.1 ASF1 like histone chaperone7.0e-7573.47Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MSA+ ITNVAVL NP+PF +P QFEISYECL+ LK DLEWKLIYVGSAE ETYDQLLE VLVGPVNVGNYRFV QADPPDPSKI EEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPE---TNDSGEEPPSNDPVSAETDCEEQ-LPASPEHPSDEQN
        YMGQEF+RVGYYVNNDY+DEQL+EEPP KVLID+VQRNILSDKPRVTKFPI+F+PE   T  +   P  +D      + E Q LP     P  E++
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPE---TNDSGEEPPSNDPVSAETDCEEQ-LPASPEHPSDEQN

AT5G38110.1 anti- silencing function 1b1.2e-7474.48Show/hide
Query:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS
        MS++NITNV VLDNP+PF  P QFEISYECL+ LK DLEWKLIYVGSAE ETYDQ+LE VLVGPVNVGNYRFVLQAD PDP KI EEDIIGVTVLLLTCS
Subjt:  MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCS

Query:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDS-GEEPPSNDPVSAETDCEEQLPASPEHPSDEQ
        YM QEFIRVGYYVNNDYDDEQLREEPP KVLID+VQRNIL+DKPRVTKFPINF+PE   + G+ P   +P  A++    + P   E P   Q
Subjt:  YMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDS-GEEPPSNDPVSAETDCEEQLPASPEHPSDEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCTGTGAATATCACGAACGTTGCAGTTCTTGACAACCCTTCGCCCTTCTCTACCCCTCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTCCTCTCAAATACGA
TTTGGAATGGAAGCTAATTTACGTTGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTGGGACCTGTCAATGTTGGTAATTATCGTTTTGTAT
TGCAGGCAGACCCTCCAGACCCGTCCAAAATTCCTGAAGAAGATATCATTGGCGTAACTGTACTTCTGTTGACCTGCTCATATATGGGGCAAGAGTTTATCCGCGTCGGT
TACTATGTAAACAATGATTATGATGACGAGCAGCTCAGAGAAGAACCTCCAGCAAAAGTCTTGATCGATAGGGTTCAGAGAAACATTCTCTCTGATAAACCCAGGGTTAC
AAAGTTTCCCATTAATTTCTACCCTGAGACTAATGATAGTGGAGAGGAACCCCCATCAAACGATCCTGTATCAGCTGAAACCGACTGTGAGGAACAACTACCTGCTTCGC
CTGAACATCCTTCAGACGAACAAAATCCTTAG
mRNA sequenceShow/hide mRNA sequence
CCGTTAGATTTGTAATGAACGATTACGTAAATTTGTCTGAAATTCGTCATCAGCCCTGCTCGCCAGACGCCACCACAGCCGACCGATGATTTTCGTGCCATCACAACTCC
CGCCAAATCCCGCAACCGGTTATCGCCGGTGACCGCCCCACATTTCCGGTATCCTTCCCTTTTCTTTTCTTTTCTTTTTTTTTTTAATCTCCCTTCCTCAGCCCCCCAAA
ACAAAAAAACTCAAACGCAAAACTTCTTTTCTCAAACAAAAAAAAAGTAAACAAAAGCCTTTCTTGGTTGGTTGCTATGAGATTTCCTTCTTCTTCAACCTCTTTCCGAT
TCCGTCATGTTTGAAGTTCGATTCACACTTCGAATTGAACAGTAGGGTTTTGAGCTATTTCATTTCTCAGCTTATTCCATGCGAGCTCTCTGTTTCTATCGAATTAAACG
ACAATGAGCGCTGTGAATATCACGAACGTTGCAGTTCTTGACAACCCTTCGCCCTTCTCTACCCCTCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTCCTCTCAAATA
CGATTTGGAATGGAAGCTAATTTACGTTGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTGGGACCTGTCAATGTTGGTAATTATCGTTTTG
TATTGCAGGCAGACCCTCCAGACCCGTCCAAAATTCCTGAAGAAGATATCATTGGCGTAACTGTACTTCTGTTGACCTGCTCATATATGGGGCAAGAGTTTATCCGCGTC
GGTTACTATGTAAACAATGATTATGATGACGAGCAGCTCAGAGAAGAACCTCCAGCAAAAGTCTTGATCGATAGGGTTCAGAGAAACATTCTCTCTGATAAACCCAGGGT
TACAAAGTTTCCCATTAATTTCTACCCTGAGACTAATGATAGTGGAGAGGAACCCCCATCAAACGATCCTGTATCAGCTGAAACCGACTGTGAGGAACAACTACCTGCTT
CGCCTGAACATCCTTCAGACGAACAAAATCCTTAGATTTAGCTTGGTTAAAGGAACTTCCATCCCAACTAAGTCATGGAAATTTCTGTGTCACGGTCGTCACTTGTTCTC
AGAGACCATCATTGCCGGAATCTGGATGGTTTTTGGCTCCAAATGCTGAAATATTTTTGAGAATATGATGGTTGGAATGCAGTGTTCAACGTGTCTTCAGCTGCTGAATT
TGCAACTCAGTTTGTTGCATGTTGACTTGTATTTCTATGGTTTGTTCTTGTACAAAGATAGCCCAAATTCATTATTTTGAAGCCCTTGTTTGATAACTAAAAAAACTTTT
GGTCCATTAGTTAAATCAGAGTTTAACTCCTGATGTTGGCAGATTAGCAACTAAAATGGTGGTGAGGGAATCACTCTGGTGTTAAAACAGAGATAGAGTCATGAAAAACT
GTTAGATAGGAGTATGCTCATATTTTGAACTGTGTTGCATTGATGATAAAAGACAAATCTTTGTTGCATAGATTGAGATTTCTTGGTTAGAACTAATTATCCAAGTACTT
AATTATGAACACGAATCTATTTAGTTGTATTTGGGTTATAATTTAAATGTAAAGGAACAGAATTAGTATGATGTTTAAAACTTAAGATGGCTTTCAATAGTTCAGAGATT
CTAAAATCGAATTACCTTATATTTCTCTCTAGGTTCCATTCAAGTCCGTGACAATTTCTCTTCAGTACTTATCCATTAAAAATTGTACGTATGTGCCTGAGTTCGAAAAT
CAAGATTATATTATTGAAGAACGCCTTTATTATAATGTTTTTGCATCTCGTTTCAGGCCTAGGACTCCAATGACATATTGAACAAGCAATTTGGATTCCACATTTGGGTT
AACTGGTCGTCCAAGATCATTCATATGCTAGAGAACTTGCTACCGGTTAATATATGTGACACATAAATTATATGTTTGTCTTTTTGTTAACATTTCAACTATATATGGG
Protein sequenceShow/hide protein sequence
MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVG
YYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPSNDPVSAETDCEEQLPASPEHPSDEQNP