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Tan0020807 (gene) of Snake gourd v1 genome

Gene IDTan0020807
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Genome locationLG09:59983043..59983582
RNA-Seq ExpressionTan0020807
SyntenyTan0020807
Gene Ontology termsGO:0006139 - nucleobase-containing compound metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0019205 - nucleobase-containing compound kinase activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067681.1 UMP-CMP kinase isoform X1 [Cucumis melo var. makuwa]3.8e-1633.33Show/hide
Query:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWG
        +P KIKI +WR+FH  LP    L+ + +DI  +C  CG  PETIT ++F C  AK LWK  LP ++   +      +    L+ S     F + C G WG
Subjt:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWG

Query:  LWADRSSVCFERPIQSIEDRVEWIVQFLR
        LW D +       +  ++ +  W+  ++R
Subjt:  LWADRSSVCFERPIQSIEDRVEWIVQFLR

TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]9.9e-1733.33Show/hide
Query:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLL-----PRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILC
        +P K KIF W++F+ +LPT   L ++ +D+   C  C  + E+ITHI++ C+ A  +W+ LL      RI+V+ D    I  +W+S+    DS VF +L 
Subjt:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLL-----PRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILC

Query:  AGAWGLWADRSSVCFERPIQSIEDRVEWIVQFLREYHSFNARRKLSLVAMNDVGRT-GRDDFNIN
         G W LW +R+SV       +  D V WI  F  E+   N      +++     +T  R +F IN
Subjt:  AGAWGLWADRSSVCFERPIQSIEDRVEWIVQFLREYHSFNARRKLSLVAMNDVGRT-GRDDFNIN

XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]4.7e-1934.4Show/hide
Query:  IFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWGLWADRS
        +F+WR F+D +P+  NL+K+G+D    CL CG + ET  H +F+C RAK +W +LLP+     D    +Q+    L  S  +  F+++  G W +W DR+
Subjt:  IFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWGLWADRS

Query:  SVCFERPIQSIEDRVEWIVQFLREY
        ++  +R I   + R +WI+ ++R++
Subjt:  SVCFERPIQSIEDRVEWIVQFLREY

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.5e-2034.88Show/hide
Query:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRI-MVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAW
        +PTKIKIF+WRS H+++PT  NLL +G+     C  CG   E+I H  F C RA+ +W+ L P +  ++ +  +   E+W SL+   +     +     W
Subjt:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRI-MVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAW

Query:  GLWADRSSVCFERPIQSIEDRVEWIVQFL
        G+W DR+S+   + +  +E + EW+  FL
Subjt:  GLWADRSSVCFERPIQSIEDRVEWIVQFL

XP_030964301.1 uncharacterized protein LOC115985500 [Quercus lobata]9.9e-1731.76Show/hide
Query:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWG
        +P K++IF WR   + LPT VNL  KG+    +C TCG EPETI+H+  +C  AK +W+  L   +V ++  M I ++   +  S  S   E     AW 
Subjt:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWG

Query:  LWADRSSVCFERPIQSIEDRVEWIVQFLREYHSFNARRKLSLVAMNDVGRTGRDDFNINIFVDVACDVQG
        +W++R+ + +E   Q  +    +  +F+ E  S  + R   L    D+G      F   I VD A    G
Subjt:  LWADRSSVCFERPIQSIEDRVEWIVQFLREYHSFNARRKLSLVAMNDVGRTGRDDFNINIFVDVACDVQG

TrEMBL top hitse value%identityAlignment
A0A1R3HK95 Zinc finger, CCHC-type5.0e-1425.29Show/hide
Query:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWG
        +P KIKIF WR FHD +    NL ++G+++  +C+ CG E ET+ H +  C +A+ +W+++    + + +      EV  S +   D    +I     W 
Subjt:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWG

Query:  LWADRSSVCFERPIQSIEDRVEWIVQFLREYHSFNARRKLSLVAMNDVGRTGRDDFNINIFVDVACDVQG
        +W  R+    +  + S  +   +++ +L EY     + + +L         G+ +  +N   D A D +G
Subjt:  LWADRSSVCFERPIQSIEDRVEWIVQFLREYHSFNARRKLSLVAMNDVGRTGRDDFNINIFVDVACDVQG

A0A5A7VQ24 Adenylate kinase1.8e-1633.33Show/hide
Query:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWG
        +P KIKI +WR+FH  LP    L+ + +DI  +C  CG  PETIT ++F C  AK LWK  LP ++   +      +    L+ S     F + C G WG
Subjt:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWG

Query:  LWADRSSVCFERPIQSIEDRVEWIVQFLR
        LW D +       +  ++ +  W+  ++R
Subjt:  LWADRSSVCFERPIQSIEDRVEWIVQFLR

A0A5C7H0P0 Uncharacterized protein4.8e-1733.33Show/hide
Query:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLL-----PRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILC
        +P K KIF W++F+ +LPT   L ++ +D+   C  C  + E+ITHI++ C+ A  +W+ LL      RI+V+ D    I  +W+S+    DS VF +L 
Subjt:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLL-----PRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILC

Query:  AGAWGLWADRSSVCFERPIQSIEDRVEWIVQFLREYHSFNARRKLSLVAMNDVGRT-GRDDFNIN
         G W LW +R+SV       +  D V WI  F  E+   N      +++     +T  R +F IN
Subjt:  AGAWGLWADRSSVCFERPIQSIEDRVEWIVQFLREYHSFNARRKLSLVAMNDVGRT-GRDDFNIN

A0A6J1CTE3 uncharacterized protein LOC1110145782.3e-1934.4Show/hide
Query:  IFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWGLWADRS
        +F+WR F+D +P+  NL+K+G+D    CL CG + ET  H +F+C RAK +W +LLP+     D    +Q+    L  S  +  F+++  G W +W DR+
Subjt:  IFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWGLWADRS

Query:  SVCFERPIQSIEDRVEWIVQFLREY
        ++  +R I   + R +WI+ ++R++
Subjt:  SVCFERPIQSIEDRVEWIVQFLREY

A0A6J1DX30 uncharacterized protein LOC1110248747.1e-2134.88Show/hide
Query:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRI-MVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAW
        +PTKIKIF+WRS H+++PT  NLL +G+     C  CG   E+I H  F C RA+ +W+ L P +  ++ +  +   E+W SL+   +     +     W
Subjt:  MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRI-MVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAW

Query:  GLWADRSSVCFERPIQSIEDRVEWIVQFL
        G+W DR+S+   + +  +E + EW+  FL
Subjt:  GLWADRSSVCFERPIQSIEDRVEWIVQFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.1e-0427.88Show/hide
Query:  VWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEV--WQSLSSSNDSTVFEILCAGA--WGLWAD
        +W S  D LPTR  L   G      C  C  E E+  H++F C  A  +W++   R+           E+  W   SSS+  ++   + A A  + +W  
Subjt:  VWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEV--WQSLSSSNDSTVFEILCAGA--WGLWAD

Query:  RSSV
        R++V
Subjt:  RSSV

AT4G29090.1 Ribonuclease H-like superfamily protein4.2e-0529.82Show/hide
Query:  KIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKV
        KI+ F+W+   + LP    L  + L     C+ C    ET+ H++F+C+ A+  W +
Subjt:  KIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKV

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.1e-0927.27Show/hide
Query:  KIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVW--QSLSSSNDSTVFEILCAGA-WG
        +  +  W SF + LPTR  L   G++IP   + C    ET  H+ F CS + A+W+    +   +    +P    W  Q    S+ +T+ ++L   A + 
Subjt:  KIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVW--QSLSSSNDSTVFEILCAGA-WG

Query:  LWADRSSVCF
        +W +R++  F
Subjt:  LWADRSSVCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACGAAGATAAAAATCTTCGTATGGCGCTCTTTTCACGACTATCTCCCTACACGGGTTAATCTTTTAAAGAAAGGTTTGGATATTCCACGTGTTTGCCTAACTTG
TGGGGGTGAACCAGAGACAATTACCCACATTATGTTCAGATGTTCGAGAGCAAAAGCTCTGTGGAAGGTGTTATTGCCAAGGATTATGGTAAATGTGGATCAACGGATGC
CTATTCAGGAGGTGTGGCAATCTTTGTCTTCGTCTAATGATTCCACGGTTTTTGAGATCTTGTGCGCTGGAGCATGGGGTCTATGGGCTGACCGTAGCAGTGTGTGTTTT
GAGCGCCCTATTCAGTCGATAGAGGACCGAGTTGAATGGATCGTTCAATTTTTACGAGAGTACCATTCTTTTAATGCACGACGGAAATTGAGCTTAGTGGCCATGAACGA
TGTTGGTAGGACAGGAAGGGATGATTTTAATATTAACATCTTTGTTGATGTTGCTTGTGATGTTCAGGGTCTACAGGAGTTGGTGTTGCAGTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAACGAAGATAAAAATCTTCGTATGGCGCTCTTTTCACGACTATCTCCCTACACGGGTTAATCTTTTAAAGAAAGGTTTGGATATTCCACGTGTTTGCCTAACTTG
TGGGGGTGAACCAGAGACAATTACCCACATTATGTTCAGATGTTCGAGAGCAAAAGCTCTGTGGAAGGTGTTATTGCCAAGGATTATGGTAAATGTGGATCAACGGATGC
CTATTCAGGAGGTGTGGCAATCTTTGTCTTCGTCTAATGATTCCACGGTTTTTGAGATCTTGTGCGCTGGAGCATGGGGTCTATGGGCTGACCGTAGCAGTGTGTGTTTT
GAGCGCCCTATTCAGTCGATAGAGGACCGAGTTGAATGGATCGTTCAATTTTTACGAGAGTACCATTCTTTTAATGCACGACGGAAATTGAGCTTAGTGGCCATGAACGA
TGTTGGTAGGACAGGAAGGGATGATTTTAATATTAACATCTTTGTTGATGTTGCTTGTGATGTTCAGGGTCTACAGGAGTTGGTGTTGCAGTTTGTTTAG
Protein sequenceShow/hide protein sequence
MPTKIKIFVWRSFHDYLPTRVNLLKKGLDIPRVCLTCGGEPETITHIMFRCSRAKALWKVLLPRIMVNVDQRMPIQEVWQSLSSSNDSTVFEILCAGAWGLWADRSSVCF
ERPIQSIEDRVEWIVQFLREYHSFNARRKLSLVAMNDVGRTGRDDFNINIFVDVACDVQGLQELVLQFV