; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020855 (gene) of Snake gourd v1 genome

Gene IDTan0020855
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHeavy metal transport/detoxification superfamily protein
Genome locationLG08:1621906..1624522
RNA-Seq ExpressionTan0020855
SyntenyTan0020855
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily
IPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030420.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-4066.67Show/hide
Query:  MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEV
        MGK VGIGKV  CF+N+ ASSS  C +IE  F+ K+PL+P Q  S LLRL DV+SH N     Q  PKVV LRVSMHCNGCAR+VEK+I K+EGVDSY+V
Subjt:  MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEV

Query:  DLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD
        D ERK VVVTGDV  FEV+QCVSKV+S EI EPQ+
Subjt:  DLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

XP_008458177.1 PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo]1.2e-3864.38Show/hide
Query:  MGKRV-GIGKVLECFLNTRASSSCLC----MEIED--KFDQKEPLIPKQTTS---QLLRLKDVVSHQNHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHI
        MGK V  IGKV  CF+NT  SSS  C     EIED   FDQK+PL+ KQTTS    LL  KDV++HQN TL  LQ  PKVV++RVSMHCNGCAR+VEK I
Subjt:  MGKRV-GIGKVLECFLNTRASSSCLC----MEIED--KFDQKEPLIPKQTTS---QLLRLKDVVSHQNHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHI

Query:  SKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD
        SK++GV+S++VD+ER+ VVVTGDVFPFEV++C+SKVKS EI E QD
Subjt:  SKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

XP_022946348.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata]2.8e-4066.67Show/hide
Query:  MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEV
        MGK VGIGKV  CF+N+ ASSS  C +IE  F+ K+PL+P Q  S LLRL DV+SH N     Q  PKVV LRVSMHCNGCAR+VEK+I K+EGVDSY+V
Subjt:  MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEV

Query:  DLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD
        D ERK VVVTGDV  FEV+QCVSKV+S EI EPQ+
Subjt:  DLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

XP_022999545.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima]1.4e-3965.93Show/hide
Query:  MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEV
        MGK VGIGKV  CF+N+RASSS  C EIE  F+ K+PL+P Q  S LLR  DV+SH N     Q  PKVV LRVSMHCNGCAR+VEK+I K+EGVDS++V
Subjt:  MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEV

Query:  DLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD
        D ERK VVVTGDV  FEV+QCVSKV+S EI E Q+
Subjt:  DLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

XP_031736582.1 uncharacterized protein LOC116402031 [Cucumis sativus]3.0e-4267.83Show/hide
Query:  MGKRV-GIGKVLECFLNTR-ASSSC--LCMEIED--KFDQKEPLIPKQTTS---QLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISK
        MGK V  IGKV  CF+NT  +S+SC    +EIED   FDQK+PL+PKQTTS    LL  KDV++HQN TL LQ  PKVVV+RVSMHCNGCAR+VEKHISK
Subjt:  MGKRV-GIGKVLECFLNTR-ASSSC--LCMEIED--KFDQKEPLIPKQTTS---QLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISK

Query:  MEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQ
        ++GV+S++VD+ER+ VVVTGDVFPFEV+QC+SKVKS EI EPQ
Subjt:  MEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQ

TrEMBL top hitse value%identityAlignment
A0A1S3C8H9 uncharacterized protein LOC1034976915.7e-3964.38Show/hide
Query:  MGKRV-GIGKVLECFLNTRASSSCLC----MEIED--KFDQKEPLIPKQTTS---QLLRLKDVVSHQNHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHI
        MGK V  IGKV  CF+NT  SSS  C     EIED   FDQK+PL+ KQTTS    LL  KDV++HQN TL  LQ  PKVV++RVSMHCNGCAR+VEK I
Subjt:  MGKRV-GIGKVLECFLNTRASSSCLC----MEIED--KFDQKEPLIPKQTTS---QLLRLKDVVSHQNHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHI

Query:  SKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD
        SK++GV+S++VD+ER+ VVVTGDVFPFEV++C+SKVKS EI E QD
Subjt:  SKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

A0A5A7V1Y2 Copper-binding family protein5.7e-3964.38Show/hide
Query:  MGKRV-GIGKVLECFLNTRASSSCLC----MEIED--KFDQKEPLIPKQTTS---QLLRLKDVVSHQNHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHI
        MGK V  IGKV  CF+NT  SSS  C     EIED   FDQK+PL+ KQTTS    LL  KDV++HQN TL  LQ  PKVV++RVSMHCNGCAR+VEK I
Subjt:  MGKRV-GIGKVLECFLNTRASSSCLC----MEIED--KFDQKEPLIPKQTTS---QLLRLKDVVSHQNHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHI

Query:  SKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD
        SK++GV+S++VD+ER+ VVVTGDVFPFEV++C+SKVKS EI E QD
Subjt:  SKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

A0A6J1G3J1 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X11.4e-4066.67Show/hide
Query:  MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEV
        MGK VGIGKV  CF+N+ ASSS  C +IE  F+ K+PL+P Q  S LLRL DV+SH N     Q  PKVV LRVSMHCNGCAR+VEK+I K+EGVDSY+V
Subjt:  MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEV

Query:  DLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD
        D ERK VVVTGDV  FEV+QCVSKV+S EI EPQ+
Subjt:  DLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

A0A6J1KFP0 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X16.8e-4065.93Show/hide
Query:  MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEV
        MGK VGIGKV  CF+N+RASSS  C EIE  F+ K+PL+P Q  S LLR  DV+SH N     Q  PKVV LRVSMHCNGCAR+VEK+I K+EGVDS++V
Subjt:  MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEV

Query:  DLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD
        D ERK VVVTGDV  FEV+QCVSKV+S EI E Q+
Subjt:  DLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

A0A7N2L0N3 HMA domain-containing protein1.3e-3870.15Show/hide
Query:  MGKRVGIGKVLECFLNTRASSSCLCM---EIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDS
        MGK +  GKVL+CF  T  SSSC CM   E +D+F+ K PLI     SQLLRLKDVVS  N TLA QLKPK+V+LRVSMHCNGCARKVEKHISKMEGV S
Subjt:  MGKRVGIGKVLECFLNTRASSSCLCM---EIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDS

Query:  YEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        Y+VDLE KMVVV GD+ PFEVL+ VSKVK+AE+W
Subjt:  YEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 457.8e-0944.16Show/hide
Query:  HQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV-KSAEIW
        H N  L + L   +V L V M C GC +KV + ISK++GVD+ E+D++R+ V VTG V   EVL+ V +  ++AE W
Subjt:  HQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV-KSAEIW

Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 25.6e-1553.12Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        +VVVL+VS+HC GC  KV KH+++M+GV S+ +D   K V VTGD+ P E+L  +SKVK+A+ W
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 13.9e-1660.94Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        +VVVLRVS+HC GCA KV+KH+SK++GV SY +D   K V VTGDV P  VL  +SKVK+A+ W
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW

Q8RXH8 Protein SODIUM POTASSIUM ROOT DEFECTIVE 32.9e-1658.82Show/hide
Query:  KVVVLRVSMHCN--GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEP
        +VVVLRVS+HC+  GC  KV+KH+SKM+GV S+ +D   K V VTGD+ P EVL C+SKVK+A+ W P
Subjt:  KVVVLRVSMHCN--GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEP

Q94BT9 Copper transport protein ATX14.6e-0945.59Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV-KSAEIWEPQ
        + VVLRV+M C GC   V++ + KMEGV+S++VD++ + V V G+V P  VLQ V+K  K    WE +
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV-KSAEIWEPQ

Arabidopsis top hitse value%identityAlignment
AT2G37390.1 Chloroplast-targeted copper chaperone protein4.0e-1653.12Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        +VVVL+VS+HC GC  KV KH+++M+GV S+ +D   K V VTGD+ P E+L  +SKVK+A+ W
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW

AT3G24450.1 Heavy metal transport/detoxification superfamily protein6.3e-3048.91Show/hide
Query:  MGKRVGIGKVLECFLNTRASSSCLCMEI---EDKFDQKEPLIPKQT--TSQLLRLKDVV-SHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEG
        MGK   IG+V +C        SC C+     E++  +KEPLI   T  + +++RLKDVV +    TLA  LKPK+V L+VSMHC GCA+KVEKHISK++G
Subjt:  MGKRVGIGKVLECFLNTRASSSCLCMEI---EDKFDQKEPLIPKQT--TSQLLRLKDVV-SHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEG

Query:  VDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        V  Y+V+LE K VVV G++ P +VL+ + KVK+A++W
Subjt:  VDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW

AT3G53530.1 Chloroplast-targeted copper chaperone protein2.1e-1758.82Show/hide
Query:  KVVVLRVSMHCN--GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEP
        +VVVLRVS+HC+  GC  KV+KH+SKM+GV S+ +D   K V VTGD+ P EVL C+SKVK+A+ W P
Subjt:  KVVVLRVSMHCN--GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEP

AT5G02600.1 Heavy metal transport/detoxification superfamily protein2.7e-1760.94Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        +VVVLRVS+HC GCA KV+KH+SK++GV SY +D   K V VTGDV P  VL  +SKVK+A+ W
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW

AT5G02600.2 Heavy metal transport/detoxification superfamily protein2.7e-1760.94Show/hide
Query:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW
        +VVVLRVS+HC GCA KV+KH+SK++GV SY +D   K V VTGDV P  VL  +SKVK+A+ W
Subjt:  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAACGGGTGGGAATTGGGAAAGTTCTAGAGTGTTTCTTAAATACAAGAGCTTCGAGTTCGTGTTTGTGCATGGAAATTGAAGACAAATTTGATCAGAAAGAGCC
ATTAATACCCAAACAAACTACATCTCAGCTTCTCAGATTGAAGGATGTGGTTTCTCATCAAAACCATACGCTCGCTCTTCAGTTAAAGCCCAAGGTGGTGGTGCTGAGGG
TGTCCATGCATTGTAATGGCTGTGCCAGAAAGGTTGAGAAGCACATCTCCAAGATGGAAGGCGTGGATTCATATGAGGTAGATTTGGAAAGGAAGATGGTGGTTGTTACT
GGAGATGTTTTTCCTTTTGAAGTTCTGCAATGCGTTTCTAAAGTGAAAAGTGCAGAGATTTGGGAGCCACAAGACTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCTTCTCAGTTCTCACACTCCCAAACAATATAAATCTCGCTTTTTGTTAAGGACAGAAATCAGAGAAGAGAGAGAGAGAGCTTTGGGAATGGGAAAACGGGTGGGAA
TTGGGAAAGTTCTAGAGTGTTTCTTAAATACAAGAGCTTCGAGTTCGTGTTTGTGCATGGAAATTGAAGACAAATTTGATCAGAAAGAGCCATTAATACCCAAACAAACT
ACATCTCAGCTTCTCAGATTGAAGGATGTGGTTTCTCATCAAAACCATACGCTCGCTCTTCAGTTAAAGCCCAAGGTGGTGGTGCTGAGGGTGTCCATGCATTGTAATGG
CTGTGCCAGAAAGGTTGAGAAGCACATCTCCAAGATGGAAGGCGTGGATTCATATGAGGTAGATTTGGAAAGGAAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTG
AAGTTCTGCAATGCGTTTCTAAAGTGAAAAGTGCAGAGATTTGGGAGCCACAAGACTGAACATAATTATTTTTCCAGATCCAATTACAAACTCAATAATTCAG
Protein sequenceShow/hide protein sequence
MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVT
GDVFPFEVLQCVSKVKSAEIWEPQD