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Tan0020891 (gene) of Snake gourd v1 genome

Gene IDTan0020891
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPH, RCC1 and FYVE domains-containing protein 1-like
Genome locationLG10:30841324..30842252
RNA-Seq ExpressionTan0020891
SyntenyTan0020891
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578904.1 PH, RCC1 and FYVE domains-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2674.71Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ
        MAERLPPGVYD EKMRSVHLSNGLESNGVYHL+MNG+RHSRS+SLSSYSCASPT SD AAW G YGT HS     DL  + + I  Q
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ

KAG7016426.1 putative E3 ubiquitin-protein ligase HERC1 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-2673.56Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ
        MAERLPPGVYD EKMRSVHLSNGLESNGVYHL+MNG+RHSRS+SLSSYSCASPT SD A W G YGT HS     DL  + + I  Q
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ

XP_022938703.1 PH, RCC1 and FYVE domains-containing protein 1-like [Cucurbita moschata]3.2e-2673.56Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ
        MAERLPPGVYD EKMRSVHLSNGLESNGVYHL+MNG+RHSRS+SLSSYSCASPT SD  AW G YGT HS     DL  + + I  Q
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ

XP_022993843.1 PH, RCC1 and FYVE domains-containing protein 1-like [Cucurbita maxima]3.2e-2673.56Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ
        MAERLPPGVYD EKMRSVHLSNGLESNGVYHL++NG+RHSRS+SLSSYSCASPT SD AAW G YGT HS     DL  + + I  Q
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ

XP_023551654.1 PH, RCC1 and FYVE domains-containing protein 1-like [Cucurbita pepo subsp. pepo]1.1e-2674.71Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ
        MAERLPPGVYD EKMRSVHLSNGLESNGVYHL+MNG+RHSRS+SLSSYSCASPT SD AAW G YGT HS     DL  + + I  Q
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ

TrEMBL top hitse value%identityAlignment
A0A0A0KI75 Uncharacterized protein4.5e-2683.1Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSF
        MAERLPPGVYD EKMRS+HLSNGLESNG YHL+MNG+RHSRS+S+SSYSCASPT S+ AAWQG YGTTHS+
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSF

A0A6J1CJU4 uncharacterized protein LOC1110118344.5e-2684.29Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHS
        MAERLPPGVYD EKMRSVHLSNGLESNG+YHLNMNG+RHSRS+SL+SYSCASPT SD AAW+G YG  HS
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHS

A0A6J1FJN1 PH, RCC1 and FYVE domains-containing protein 1-like1.5e-2673.56Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ
        MAERLPPGVYD EKMRSVHLSNGLESNGVYHL+MNG+RHSRS+SLSSYSCASPT SD  AW G YGT HS     DL  + + I  Q
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ

A0A6J1JR98 PH, RCC1 and FYVE domains-containing protein 1-like4.5e-2687.14Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHS
        MAERLPPGVYD EKMRSVHLSNGLESNGV HLNMNG+RHSRS+SLSSYSCASPT SD AAWQG YG  HS
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHS

A0A6J1K3G5 PH, RCC1 and FYVE domains-containing protein 1-like1.5e-2673.56Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ
        MAERLPPGVYD EKMRSVHLSNGLESNGVYHL++NG+RHSRS+SLSSYSCASPT SD AAW G YGT HS     DL  + + I  Q
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain6.4e-0941.43Show/hide
Query:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHS
        +A  LPPG Y+ E  R+ +L NG E NG +  N NG R SRS+S+S  S ASP      +  G++  + S
Subjt:  MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGAGGTTACCACCTGGAGTATATGATGTCGAGAAAATGAGATCAGTTCATCTTTCAAATGGTTTGGAGTCAAATGGTGTCTACCATTTGAATATGAATGGAGA
CCGCCATTCACGATCTAATTCACTTAGCAGCTATTCTTGTGCATCTCCCACGACATCTGATGTTGCTGCTTGGCAAGGAATCTATGGCACAACTCATTCATTCACGTTCG
GAGAAGATTTGGAGAGCATCAAGCAGAAAATTGGTGGTCAGAGAACCGTGAGAAGGTATATGAGAGATATAACGTTCGGAGATCAGACAAGTCTTCAGTTTCGGGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGAGGTTACCACCTGGAGTATATGATGTCGAGAAAATGAGATCAGTTCATCTTTCAAATGGTTTGGAGTCAAATGGTGTCTACCATTTGAATATGAATGGAGA
CCGCCATTCACGATCTAATTCACTTAGCAGCTATTCTTGTGCATCTCCCACGACATCTGATGTTGCTGCTTGGCAAGGAATCTATGGCACAACTCATTCATTCACGTTCG
GAGAAGATTTGGAGAGCATCAAGCAGAAAATTGGTGGTCAGAGAACCGTGAGAAGGTATATGAGAGATATAACGTTCGGAGATCAGACAAGTCTTCAGTTTCGGGACTAA
Protein sequenceShow/hide protein sequence
MAERLPPGVYDVEKMRSVHLSNGLESNGVYHLNMNGDRHSRSNSLSSYSCASPTTSDVAAWQGIYGTTHSFTFGEDLESIKQKIGGQRTVRRYMRDITFGDQTSLQFRD