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Tan0020894 (gene) of Snake gourd v1 genome

Gene IDTan0020894
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin regulated protein
Genome locationLG02:14079327..14080681
RNA-Seq ExpressionTan0020894
SyntenyTan0020894
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044354.1 peamaclein-like [Cucumis melo var. makuwa]4.2e-1651.72Show/hide
Query:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++F      CFLL +SSF++T  A    C + C+KRCS A +K RCMKYC ICC  CKCVP G YG +H CPCY  + + +GR KCP
Subjt:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

KAG6588701.1 Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3089.55Show/hide
Query:  METAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVPGAYGKRHCPCYSHVHTLRGRAKCP
        META+A +DVCTRPCRKRCSHAKLKR+CMK+CRICC +CKCVPGAYGKRHCPCYSHVHTLRGRAKCP
Subjt:  METAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVPGAYGKRHCPCYSHVHTLRGRAKCP

KAG6793118.1 hypothetical protein POTOM_002309 [Populus tomentosa]4.2e-1650.57Show/hide
Query:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++FL  L  C LL SSSF+E  +A S  CT+ C  RC++A ++ RC+KYC ICC +CKCVP G YG +H CPCY      +G+ KCP
Subjt:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

KAG7022485.1 Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma]8.6e-3884.09Show/hide
Query:  MRTQIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVPGAYGKRHCPCYSHVHTLRGRAKCP
        MR QI ++G F CFLLLS+SFMETA+A +DVCTRPCRKRCSHAKLKR+CMK+CRICC +CKCVPGAYGKRHCPCYSHVHTLRGRAKCP
Subjt:  MRTQIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVPGAYGKRHCPCYSHVHTLRGRAKCP

XP_021683427.1 snakin-1-like [Hevea brasiliensis]2.4e-1652.87Show/hide
Query:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++F   L  C LLLSSSF+E A+A S  CT+ C+ RC+ A +K RC+KYC ICC+ CKCVP G YG +H CPCY      +G+ KCP
Subjt:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

TrEMBL top hitse value%identityAlignment
A0A0A0K2Z1 Uncharacterized protein1.7e-3987.5Show/hide
Query:  MRTQIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVPGAYGKRHCPCYSHVHTLRGRAKCP
        MRT + LLGLFFCFLLLS+SFM+TA+ADSD CTRPCRKRCS AKLKRRCMKYCRICCS+CKCVPG YGKRHCPCYSHVHT+RGRAKCP
Subjt:  MRTQIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVPGAYGKRHCPCYSHVHTLRGRAKCP

A0A2C9VJ65 Uncharacterized protein3.4e-1651.72Show/hide
Query:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++F   L  C LLLSSSF+E  IA S  C   C++RC+ A +K RC+KYC ICC+ CKCVP G YG +H CPCY      +G+ KCP
Subjt:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

A0A4U5QDN8 Uncharacterized protein2.0e-1650.57Show/hide
Query:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++FL  L  C LL SSSF+E  +A S  CT+ C  RC++A ++ RC+KYC ICC +CKCVP G YG +H CPCY      +G+ KCP
Subjt:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

A0A5D3E0A6 Peamaclein-like2.0e-1651.72Show/hide
Query:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++F      CFLL +SSF++T  A    C + C+KRCS A +K RCMKYC ICC  CKCVP G YG +H CPCY  + + +GR KCP
Subjt:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

A0A5N6QLL9 Uncharacterized protein3.4e-1658.02Show/hide
Query:  LFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        L  C LLLSSSF+E  +A S  CT  C  RCS A +K RCMKYC ICC  CKCVP G YG +H CPCY      +G+AKCP
Subjt:  LFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

SwissProt top hitse value%identityAlignment
C0HLQ1 Cypmaclein2.1e-1049.15Show/hide
Query:  CTRPCRKRCSHAKLKRRCMKYCRICCSRCKCV-PGAYGKR-HCPCYSHVHTLRGRAKCP
        C + C +RCS A    RC+KYC ICC +C CV PG YG    CPCY+++   +G  KCP
Subjt:  CTRPCRKRCSHAKLKRRCMKYCRICCSRCKCV-PGAYGKR-HCPCYSHVHTLRGRAKCP

O80641 Gibberellin-regulated protein 83.2e-1143.68Show/hide
Query:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        ++ ++  F   LLL+SSF   + ADS  C   C  RCS A     C+KYC ICC +C CVP G +G K  CPCY  +   +G +KCP
Subjt:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP

P86888 Peamaclein2.7e-1050Show/hide
Query:  SDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        S  C   C  RCS A  + RC+KYC ICC +C CVP G YG K  CPCY  +   +G  KCP
Subjt:  SDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP

Q8LFM2 Gibberellin-regulated protein 108.5e-1248.05Show/hide
Query:  LLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCK-CVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        LL++SS    + ADS  C   C  RCS A  + RC+KYC ICC +C  CVP G YG K  CPCY  +   +G +KCP
Subjt:  LLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCK-CVP-GAYG-KRHCPCYSHVHTLRGRAKCP

Q948Z4 Snakin-17.4e-1647.13Show/hide
Query:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        ++FLL L    L+++ S ++T +A S  C   C+ RCS A L  RC+KYC ICC  CKCVP G YG +H CPCY      +G++KCP
Subjt:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

Arabidopsis top hitse value%identityAlignment
AT2G14900.1 Gibberellin-regulated family protein1.3e-1049.15Show/hide
Query:  CTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP
        C + C  RC  A +K RC+KYC ICC  C+CVP G YG +H C CY    + +G  KCP
Subjt:  CTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYGKRH-CPCYSHVHTLRGRAKCP

AT2G39540.1 Gibberellin-regulated family protein2.3e-1243.68Show/hide
Query:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        ++ ++  F   LLL+SSF   + ADS  C   C  RCS A     C+KYC ICC +C CVP G +G K  CPCY  +   +G +KCP
Subjt:  QIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVP-GAYG-KRHCPCYSHVHTLRGRAKCP

AT3G02885.1 GAST1 protein homolog 51.8e-0939.78Show/hide
Query:  RTQIFLLGLFFCFLLLSSSFMETAIADSDV----CTRPCRKRCSHAKLKRRCMKYCRICCSRCKCV-PGAYG-KRHCPCYSHVHTLRGRAKCP
        R  +F L L   FLL  S+ ++ A     +    C   C  RCS    K+ CM +C  CC +C CV PG +G K+ CPCY++  T  GR KCP
Subjt:  RTQIFLLGLFFCFLLLSSSFMETAIADSDV----CTRPCRKRCSHAKLKRRCMKYCRICCSRCKCV-PGAYG-KRHCPCYSHVHTLRGRAKCP

AT4G09610.1 GAST1 protein homolog 21.4e-0947.46Show/hide
Query:  CTRPCRKRCSHAKLKRRCMKYCRICCSRCKCV-PGAYGKRH-CPCYSHVHTLRGRAKCP
        C   C+ RCS +   + C++ C  CCSRC CV PG  G  H CPCY+ + T  GR KCP
Subjt:  CTRPCRKRCSHAKLKRRCMKYCRICCSRCKCV-PGAYGKRH-CPCYSHVHTLRGRAKCP

AT5G59845.1 Gibberellin-regulated family protein6.0e-1348.05Show/hide
Query:  LLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCK-CVP-GAYG-KRHCPCYSHVHTLRGRAKCP
        LL++SS    + ADS  C   C  RCS A  + RC+KYC ICC +C  CVP G YG K  CPCY  +   +G +KCP
Subjt:  LLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCK-CVP-GAYG-KRHCPCYSHVHTLRGRAKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGAACACAGATCTTCCTTCTCGGTTTGTTCTTCTGTTTTCTTCTCTTAAGTTCTTCTTTCATGGAAACCGCCATTGCCGACTCAGATGTGTGCACAAGACCATG
CAGGAAGAGGTGCTCGCACGCGAAGCTTAAGCGTCGGTGCATGAAGTATTGCAGAATATGTTGCAGTAGATGCAAGTGTGTGCCTGGGGCTTATGGCAAGCGCCATTGCC
CTTGCTATAGCCATGTTCACACCCTTAGGGGCAGGGCCAAGTGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
CTTCTTTAAAAACAGAAACTCTCAAAACTCCTTATGCTCTGTTCAGAAGAAGAATCTGAGATTTCATTTCTGATCTGAAAAATCAAAGAGATGATGAGAACACAGATCTT
CCTTCTCGGTTTGTTCTTCTGTTTTCTTCTCTTAAGTTCTTCTTTCATGGAAACCGCCATTGCCGACTCAGATGTGTGCACAAGACCATGCAGGAAGAGGTGCTCGCACG
CGAAGCTTAAGCGTCGGTGCATGAAGTATTGCAGAATATGTTGCAGTAGATGCAAGTGTGTGCCTGGGGCTTATGGCAAGCGCCATTGCCCTTGCTATAGCCATGTTCAC
ACCCTTAGGGGCAGGGCCAAGTGCCCTTAATTTTTAAGACCATTGTCCCTTTAAACCAACCACCCAAATTCTAGAAAAAGACCAATAATTTTGTGTTTAAATTGGATATT
AAAGCTTGAGTGTTTGAGAGTCAGGTTTGGTGTGCTTTAATATGATAAACAATGTGTATTTATGATCTACCTTATTTTTATTATTTAAG
Protein sequenceShow/hide protein sequence
MMRTQIFLLGLFFCFLLLSSSFMETAIADSDVCTRPCRKRCSHAKLKRRCMKYCRICCSRCKCVPGAYGKRHCPCYSHVHTLRGRAKCP