; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020909 (gene) of Snake gourd v1 genome

Gene IDTan0020909
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING/U-box superfamily protein
Genome locationLG11:10082514..10083337
RNA-Seq ExpressionTan0020909
SyntenyTan0020909
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4384749.1 hypothetical protein F8388_004056 [Cannabis sativa]3.3e-1035.16Show/hide
Query:  SQLVAATAVVPFWISFTSTTVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLP
        + L  A ++    I+    T L+ Q +  D L     E+   V+T+ +T +++R L+D S D DG  L  ETC +CLE      D       + +   +P
Subjt:  SQLVAATAVVPFWISFTSTTVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLP

Query:  CSHLFHFECVSQWLRFDHRCPVCRSPMP
        CSH+FH +C+ QWL   H CP+CR PMP
Subjt:  CSHLFHFECVSQWLRFDHRCPVCRSPMP

PON51131.1 43kDa postsynaptic protein [Parasponia andersonii]5.1e-1140Show/hide
Query:  VRTLRSTSEAVRKLKDESFDVD-GSSLLDETCIVCLEGFLDQQ---DEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP
        +RT+ +T E++R LK+ +   D G     E C +CLE    Q    D + D V+K  + ++PCSH++H +C+ QWL+  H CP+CR PMP
Subjt:  VRTLRSTSEAVRKLKDESFDVD-GSSLLDETCIVCLEGFLDQQ---DEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP

RXH86380.1 hypothetical protein DVH24_017433 [Malus domestica]6.7e-1134.58Show/hide
Query:  RSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFL--DQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMPWVQPRFP-EVSSPSLF
        +S+ E + KL+     ++       +C++C++GFL  D  +      + K + RLPC HL+H +C+ +WL   H CP+CR PMP V+   P E S PSL 
Subjt:  RSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFL--DQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMPWVQPRFP-EVSSPSLF

Query:  STTSRPP
              P
Subjt:  STTSRPP

XP_010112651.1 E3 ubiquitin-protein ligase AIP2 [Morus notabilis]1.1e-1036.97Show/hide
Query:  TVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCI-VCLEGFLDQQDEEEDVVMK-----KRVCRLPCSHLFHFECVSQW
        T+  N +E  D +     ES    RT+ +T  ++  L+ E+  V+G     ETC  +CLEGF+    E+ D V       K   R+PCSHL+H  C+ QW
Subjt:  TVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCI-VCLEGFLDQQDEEEDVVMK-----KRVCRLPCSHLFHFECVSQW

Query:  LRFDHRCPVCRSPMPWVQP
        L+  H CP+CR  MP   P
Subjt:  LRFDHRCPVCRSPMPWVQP

XP_030487440.1 E3 ubiquitin-protein ligase RING1-like [Cannabis sativa]1.5e-1038.53Show/hide
Query:  TVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHR
        T L+ Q +  D L     E+   V+T+ +T +++R L+D S D DG  L  ETC +CLE      D       + +   +PCSH+FH +C+ QWL   H 
Subjt:  TVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHR

Query:  CPVCRSPMP
        CP+CR PMP
Subjt:  CPVCRSPMP

TrEMBL top hitse value%identityAlignment
A0A2P5BQP5 43kDa postsynaptic protein2.5e-1140Show/hide
Query:  VRTLRSTSEAVRKLKDESFDVD-GSSLLDETCIVCLEGFLDQQ---DEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP
        +RT+ +T E++R LK+ +   D G     E C +CLE    Q    D + D V+K  + ++PCSH++H +C+ QWL+  H CP+CR PMP
Subjt:  VRTLRSTSEAVRKLKDESFDVD-GSSLLDETCIVCLEGFLDQQ---DEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP

A0A498IT59 RING-type domain-containing protein3.2e-1134.58Show/hide
Query:  RSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFL--DQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMPWVQPRFP-EVSSPSLF
        +S+ E + KL+     ++       +C++C++GFL  D  +      + K + RLPC HL+H +C+ +WL   H CP+CR PMP V+   P E S PSL 
Subjt:  RSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFL--DQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMPWVQPRFP-EVSSPSLF

Query:  STTSRPP
              P
Subjt:  STTSRPP

A0A7J6E8Q2 RING-type domain-containing protein1.6e-1035.16Show/hide
Query:  SQLVAATAVVPFWISFTSTTVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLP
        + L  A ++    I+    T L+ Q +  D L     E+   V+T+ +T +++R L+D S D DG  L  ETC +CLE      D       + +   +P
Subjt:  SQLVAATAVVPFWISFTSTTVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLP

Query:  CSHLFHFECVSQWLRFDHRCPVCRSPMP
        CSH+FH +C+ QWL   H CP+CR PMP
Subjt:  CSHLFHFECVSQWLRFDHRCPVCRSPMP

A0A7J6I110 RING-type domain-containing protein1.6e-1035.16Show/hide
Query:  SQLVAATAVVPFWISFTSTTVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLP
        + L  A ++    I+    T L+ Q +  D L     E+   V+T+ +T +++R L+D S D DG  L  ETC +CLE      D       + +   +P
Subjt:  SQLVAATAVVPFWISFTSTTVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLP

Query:  CSHLFHFECVSQWLRFDHRCPVCRSPMP
        CSH+FH +C+ QWL   H CP+CR PMP
Subjt:  CSHLFHFECVSQWLRFDHRCPVCRSPMP

W9SJ78 E3 ubiquitin-protein ligase RING15.5e-1136.97Show/hide
Query:  TVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCI-VCLEGFLDQQDEEEDVVMK-----KRVCRLPCSHLFHFECVSQW
        T+  N +E  D +     ES    RT+ +T  ++  L+ E+  V+G     ETC  +CLEGF+    E+ D V       K   R+PCSHL+H  C+ QW
Subjt:  TVLRNQAEAIDWLHGGTPES-HVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCI-VCLEGFLDQQDEEEDVVMK-----KRVCRLPCSHLFHFECVSQW

Query:  LRFDHRCPVCRSPMPWVQP
        L+  H CP+CR  MP   P
Subjt:  LRFDHRCPVCRSPMPWVQP

SwissProt top hitse value%identityAlignment
E9QAU8 E3 ubiquitin-protein ligase RNF1654.7e-0742.65Show/hide
Query:  KDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCR
        KDE  + D     DE C +CL    D +D          V RLPC HLFH  CV QWL    +CP+CR
Subjt:  KDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCR

Q08109 ERAD-associated E3 ubiquitin-protein ligase HRD11.4e-0631.03Show/hide
Query:  DETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPM
        D  CI+C++  +   +++      K+  RLPC H+ H  C+  W+     CP+CR P+
Subjt:  DETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPM

Q5Z880 ERAD-associated E3 ubiquitin-protein ligase HRD13.9e-0636.47Show/hide
Query:  VRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPM
        VR  + TS    +  D + D   +S  D TCI+C          EE    KK    L C HLFH  C+  WL   H CP CR+P+
Subjt:  VRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPM

Q6ZSG1 E3 ubiquitin-protein ligase RNF1654.7e-0742.65Show/hide
Query:  KDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCR
        KDE  + D     DE C +CL    D +D          V RLPC HLFH  CV QWL    +CP+CR
Subjt:  KDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCR

Q8GXF8 E3 ubiquitin-protein ligase SGR9, amyloplastic3.6e-0731.11Show/hide
Query:  ESHVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP
        E + V   R+   A+R +  E F+V  S+  +  C++C E   + +D          VC +PC H FH++C+  WL   + CP CR  +P
Subjt:  ESHVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP

Arabidopsis top hitse value%identityAlignment
AT1G74620.1 RING/U-box superfamily protein2.5e-0835.71Show/hide
Query:  CIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP
        C +C+E +++             V +LPC H FH +C+++WL+ +H CP+CRS +P
Subjt:  CIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP

AT5G02750.1 RING/U-box superfamily protein2.5e-0831.11Show/hide
Query:  ESHVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP
        E + V   R+   A+R +  E F+V  S+  +  C++C E   + +D          VC +PC H FH++C+  WL   + CP CR  +P
Subjt:  ESHVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP

AT5G15820.1 RING/U-box superfamily protein6.7e-0931.11Show/hide
Query:  ESHVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP
        E+ +  T  ++   V  L D    ++  S +   C +C          +++VV K++V RLPC H +H EC+  WL   + CPVCR  +P
Subjt:  ESHVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP

AT5G55970.1 RING/U-box superfamily protein6.7e-0935.9Show/hide
Query:  RKLKDESFDVDGSSLL---DETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP
        +++ D + D D  S     D  C +CL  + D          K+ V +LPCSH FH +CV QWLR    CP+C+  +P
Subjt:  RKLKDESFDVDGSSLL---DETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP

AT5G55970.2 RING/U-box superfamily protein6.7e-0935.9Show/hide
Query:  RKLKDESFDVDGSSLL---DETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP
        +++ D + D D  S     D  C +CL  + D          K+ V +LPCSH FH +CV QWLR    CP+C+  +P
Subjt:  RKLKDESFDVDGSSLL---DETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRCPVCRSPMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAACCCAGCAATATTGGCCGATCTCATATTCCCATGCTCCATCGGAGCCACTTCCACAGCAGCCAACGGAAGCGGCTGGTCCCTCACATTCGACTGCAGCTTGAT
GTTCAGCGCCAACATGTACTCCTTCTCCAACACCAACGGCTTCCTCATCCGCCTCCAACTCTCCCACTTCCTCCTCCCTCTCTACCTCTACAACAACTCCTTCCTCTTAG
ACTCCTCTTTCCAACTCCTCCACTTCCCTCCTTCCCACTTCTCCTCCTACTCCTCCGTCCACCACTTCGTCCTCTCCACCCTCTCCCAACTCGTCGCCGCCACCGCTGTC
GTCCCCTTCTGGATTTCCTTCACCTCCACCACCGTACTACGCAACCAGGCCGAGGCTATCGACTGGCTCCATGGCGGCACCCCCGAGTCGCACGTCGTCAGAACGCTCCG
GTCGACGTCCGAGGCCGTGCGGAAGCTCAAGGATGAGAGCTTTGATGTTGATGGGTCGTCTTTGTTGGATGAGACCTGCATTGTATGTTTGGAAGGGTTTCTTGATCAAC
AAGATGAAGAAGAAGACGTGGTAATGAAGAAGCGTGTGTGTCGGCTTCCATGTTCTCATTTGTTCCATTTTGAGTGTGTTTCTCAATGGCTTAGATTTGATCATCGCTGC
CCGGTTTGCCGCTCTCCCATGCCTTGGGTTCAACCACGTTTCCCCGAGGTTTCTTCTCCTTCACTTTTCAGTACAACGTCCAGACCACCGCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAACCCAGCAATATTGGCCGATCTCATATTCCCATGCTCCATCGGAGCCACTTCCACAGCAGCCAACGGAAGCGGCTGGTCCCTCACATTCGACTGCAGCTTGAT
GTTCAGCGCCAACATGTACTCCTTCTCCAACACCAACGGCTTCCTCATCCGCCTCCAACTCTCCCACTTCCTCCTCCCTCTCTACCTCTACAACAACTCCTTCCTCTTAG
ACTCCTCTTTCCAACTCCTCCACTTCCCTCCTTCCCACTTCTCCTCCTACTCCTCCGTCCACCACTTCGTCCTCTCCACCCTCTCCCAACTCGTCGCCGCCACCGCTGTC
GTCCCCTTCTGGATTTCCTTCACCTCCACCACCGTACTACGCAACCAGGCCGAGGCTATCGACTGGCTCCATGGCGGCACCCCCGAGTCGCACGTCGTCAGAACGCTCCG
GTCGACGTCCGAGGCCGTGCGGAAGCTCAAGGATGAGAGCTTTGATGTTGATGGGTCGTCTTTGTTGGATGAGACCTGCATTGTATGTTTGGAAGGGTTTCTTGATCAAC
AAGATGAAGAAGAAGACGTGGTAATGAAGAAGCGTGTGTGTCGGCTTCCATGTTCTCATTTGTTCCATTTTGAGTGTGTTTCTCAATGGCTTAGATTTGATCATCGCTGC
CCGGTTTGCCGCTCTCCCATGCCTTGGGTTCAACCACGTTTCCCCGAGGTTTCTTCTCCTTCACTTTTCAGTACAACGTCCAGACCACCGCGTTAA
Protein sequenceShow/hide protein sequence
MTNPAILADLIFPCSIGATSTAANGSGWSLTFDCSLMFSANMYSFSNTNGFLIRLQLSHFLLPLYLYNNSFLLDSSFQLLHFPPSHFSSYSSVHHFVLSTLSQLVAATAV
VPFWISFTSTTVLRNQAEAIDWLHGGTPESHVVRTLRSTSEAVRKLKDESFDVDGSSLLDETCIVCLEGFLDQQDEEEDVVMKKRVCRLPCSHLFHFECVSQWLRFDHRC
PVCRSPMPWVQPRFPEVSSPSLFSTTSRPPR