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Tan0020934 (gene) of Snake gourd v1 genome

Gene IDTan0020934
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 34
Genome locationLG07:27759368..27760499
RNA-Seq ExpressionTan0020934
SyntenyTan0020934
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571407.1 Protein RALF-like 34, partial [Cucurbita argyrosperma subsp. sororia]4.4e-4577.05Show/hide
Query:  MAPKLLLLLFA--ALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQPDQEDEH-ELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNC
        MA KLL   F    LL +S+  AHLP+DTSLKLMADALEWPTTIS+   D + +H +L QDPRRSLFW RVHYYISYGALAANRIPCPPRSGRPYYTHNC
Subjt:  MAPKLLLLLFA--ALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQPDQEDEH-ELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNC

Query:  YKARGPANPYSRGCTAITRCRR
        YKARGP NPYSRGC+AITRCRR
Subjt:  YKARGPANPYSRGCTAITRCRR

XP_004148071.1 protein RALF-like 34 [Cucumis sativus]2.6e-4576.8Show/hide
Query:  MAPKLLL--LLFAALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQ----PDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYT
        MA K LL  L    LLF+SS+ AHL +DTSLKLMADALEWPTT SLIQ     D +D+ +L+QDPRRSLFWRRVHYYISYGAL+ANRIPCPPRSGRPYYT
Subjt:  MAPKLLL--LLFAALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQ----PDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYT

Query:  HNCYKARGPANPYSRGCTAITRCRR
        HNCYKARGP NPY+RGC+AITRCRR
Subjt:  HNCYKARGPANPYSRGCTAITRCRR

XP_008457868.1 PREDICTED: protein RALF-like 34 [Cucumis melo]4.0e-4679.2Show/hide
Query:  MAPK-LLLLLFA-ALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQ----PDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYT
        MA K LL LLF   LLF+SS+ AHL +DTSLKLMADALEWPTT SLIQ     D +D+ +L+QDPRRSLFWRRVHYYISYGAL+ANRIPCPPRSGRPYYT
Subjt:  MAPK-LLLLLFA-ALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQ----PDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYT

Query:  HNCYKARGPANPYSRGCTAITRCRR
        HNCYKARGP NPYSRGC+AITRCRR
Subjt:  HNCYKARGPANPYSRGCTAITRCRR

XP_023513191.1 protein RALF-like 34 [Cucurbita pepo subsp. pepo]3.4e-4577.69Show/hide
Query:  MAPKLLLLLFA-ALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQPDQEDEH-ELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCY
        MA KLL   F   LL +S+  AHLP+DTSLKLMADALEWPTTIS+   D + +H +L QDPRRSLFW RVHYYISYGALAANRIPCPPRSGRPYYTHNCY
Subjt:  MAPKLLLLLFA-ALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQPDQEDEH-ELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCY

Query:  KARGPANPYSRGCTAITRCRR
        KARGP NPYSRGC+AITRCRR
Subjt:  KARGPANPYSRGCTAITRCRR

XP_038900702.1 protein RALF-like 34 [Benincasa hispida]5.0e-4981.45Show/hide
Query:  MAPKLLLLLFAALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQPD-----QEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTH
        MA K LLLLF  LLFISS+ AHL +DTSLKLMADALEWPTT SLI+        +DE +LEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTH
Subjt:  MAPKLLLLLFAALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQPD-----QEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTH

Query:  NCYKARGPANPYSRGCTAITRCRR
        NCYKARGP NPYSRGC+AITRCRR
Subjt:  NCYKARGPANPYSRGCTAITRCRR

TrEMBL top hitse value%identityAlignment
A0A0A0LMS2 Uncharacterized protein1.2e-4576.8Show/hide
Query:  MAPKLLL--LLFAALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQ----PDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYT
        MA K LL  L    LLF+SS+ AHL +DTSLKLMADALEWPTT SLIQ     D +D+ +L+QDPRRSLFWRRVHYYISYGAL+ANRIPCPPRSGRPYYT
Subjt:  MAPKLLL--LLFAALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQ----PDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYT

Query:  HNCYKARGPANPYSRGCTAITRCRR
        HNCYKARGP NPY+RGC+AITRCRR
Subjt:  HNCYKARGPANPYSRGCTAITRCRR

A0A1S3C7S7 protein RALF-like 341.9e-4679.2Show/hide
Query:  MAPK-LLLLLFA-ALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQ----PDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYT
        MA K LL LLF   LLF+SS+ AHL +DTSLKLMADALEWPTT SLIQ     D +D+ +L+QDPRRSLFWRRVHYYISYGAL+ANRIPCPPRSGRPYYT
Subjt:  MAPK-LLLLLFA-ALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQ----PDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYT

Query:  HNCYKARGPANPYSRGCTAITRCRR
        HNCYKARGP NPYSRGC+AITRCRR
Subjt:  HNCYKARGPANPYSRGCTAITRCRR

A0A1S3VP27 protein RALF-like 342.9e-3465Show/hide
Query:  PKLLLLLFAALLFISSTHAHLPI-DTSLKLMADALEWPTTISLIQP-DQEDEHELEQD-PRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYK
        P L L LF   LF      H  I DT L LM+DAL+WPTT+SL    D+++E ++E    RRSLFWRR+ YYISYGAL+ANRIPCPPRSGR YYTHNCYK
Subjt:  PKLLLLLFAALLFISSTHAHLPI-DTSLKLMADALEWPTTISLIQP-DQEDEHELEQD-PRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYK

Query:  ARGPANPYSRGCTAITRCRR
        ARGP +PYSRGC+ ITRCRR
Subjt:  ARGPANPYSRGCTAITRCRR

A0A6J1EJN3 protein RALF-like 348.0e-4574.02Show/hide
Query:  MAPKLLLLLFA-ALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQPDQEDEH-------ELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPY
        MA KLL   F   LL +S+  AHLP+DTSLKLMADALEWPTTIS+   D + +H       +L QDPRRSLFW RVHYYISYGALAANRIPCPPRSGRPY
Subjt:  MAPKLLLLLFA-ALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQPDQEDEH-------ELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPY

Query:  YTHNCYKARGPANPYSRGCTAITRCRR
        YTHNCYKARGP NPYSRGC+AITRCRR
Subjt:  YTHNCYKARGPANPYSRGCTAITRCRR

V7CF83 Uncharacterized protein6.4e-3465.57Show/hide
Query:  PKLLLLLFAALLFISSTH--AHLPID-TSLKLMADALEWPTTISLIQP-DQEDEHELEQD-PRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNC
        P L L L   L F+ S H   H  +D T+L LM+DAL+WPTT+SL    D+EDE ++E    RRSLFWRR+ YYISYGAL+ANRIPCPPRSGR YYTHNC
Subjt:  PKLLLLLFAALLFISSTH--AHLPID-TSLKLMADALEWPTTISLIQP-DQEDEHELEQD-PRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNC

Query:  YKARGPANPYSRGCTAITRCRR
        YKARGP +PYSRGC+ ITRCRR
Subjt:  YKARGPANPYSRGCTAITRCRR

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 196.4e-0756.67Show/hide
Query:  RRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR
        RR L  RR   YISYGAL  N +PC  R GR YY  +C K R  ANPY RGC+ IT C R
Subjt:  RRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR

Q8L9P8 Protein RALF-like 331.2e-0850Show/hide
Query:  EDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR
        E+E E++ +  R +       YISYGAL  N +PC  R G  YY  NC +    ANPYSRGC+AITRCRR
Subjt:  EDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR

Q945T0 Rapid alkalinization factor4.0e-0951.43Show/hide
Query:  QEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCR
        +E+E EL+ +  R +       YISYGAL  N +PC  R G  YY  NC K    ANPYSRGC+AITRCR
Subjt:  QEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCR

Q9FHA6 Protein RALF-like 344.6e-2954.92Show/hide
Query:  LLLLFAALLFISSTHAH-LPIDTSLKLMADALEWPTTIS----LIQPDQEDEHELEQD---PRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNC
        LLL+ + L FIS   +  L  + SL L+ D  +WP + S    +I  ++  E   E D    RRSL+WRR  YYISYGAL+ANR+PCPPRSGR YYTHNC
Subjt:  LLLLFAALLFISSTHAH-LPIDTSLKLMADALEWPTTIS----LIQPDQEDEHELEQD---PRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNC

Query:  YKARGPANPYSRGCTAITRCRR
        ++ARGP +PYSRGC++ITRCRR
Subjt:  YKARGPANPYSRGCTAITRCRR

Q9MA62 Protein RALF-like 221.5e-0847.89Show/hide
Query:  QEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR
        +E+E E + D  R +  ++   YISYGA+  N +PC  R G  YY  NC +    ANPYSRGC+ ITRCRR
Subjt:  QEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 12.8e-0532.79Show/hide
Query:  LLLLLFAALLFISSTHAHLPIDTSLKLMADALEWPTT--------ISLIQPDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHN
        L L L   ++FI S+    P+          + W TT         S+ +    +E E++ +  R +       YISY +L  N +PC  R G  YY  N
Subjt:  LLLLLFAALLFISSTHAHLPIDTSLKLMADALEWPTT--------ISLIQPDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHN

Query:  CYKARGPANPYSRGCTAITRCR
        C      ANPYSRGC+ I RCR
Subjt:  CYKARGPANPYSRGCTAITRCR

AT2G33775.1 ralf-like 194.6e-0856.67Show/hide
Query:  RRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR
        RR L  RR   YISYGAL  N +PC  R GR YY  +C K R  ANPY RGC+ IT C R
Subjt:  RRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR

AT3G05490.1 ralf-like 221.1e-0947.89Show/hide
Query:  QEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR
        +E+E E + D  R +  ++   YISYGA+  N +PC  R G  YY  NC +    ANPYSRGC+ ITRCRR
Subjt:  QEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR

AT4G15800.1 ralf-like 338.3e-1050Show/hide
Query:  EDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR
        E+E E++ +  R +       YISYGAL  N +PC  R G  YY  NC +    ANPYSRGC+AITRCRR
Subjt:  EDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRGCTAITRCRR

AT5G67070.1 ralf-like 343.2e-3054.92Show/hide
Query:  LLLLFAALLFISSTHAH-LPIDTSLKLMADALEWPTTIS----LIQPDQEDEHELEQD---PRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNC
        LLL+ + L FIS   +  L  + SL L+ D  +WP + S    +I  ++  E   E D    RRSL+WRR  YYISYGAL+ANR+PCPPRSGR YYTHNC
Subjt:  LLLLFAALLFISSTHAH-LPIDTSLKLMADALEWPTTIS----LIQPDQEDEHELEQD---PRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNC

Query:  YKARGPANPYSRGCTAITRCRR
        ++ARGP +PYSRGC++ITRCRR
Subjt:  YKARGPANPYSRGCTAITRCRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGAAGCTCCTCCTCCTCCTCTTCGCCGCCCTTCTCTTCATCTCCTCCACTCACGCCCATCTCCCCATCGACACCTCTCTCAAGCTCATGGCCGACGCCCTCGA
ATGGCCCACCACAATCTCCCTCATCCAACCCGACCAAGAAGATGAACATGAACTAGAACAAGACCCTCGTCGATCTCTCTTCTGGAGGCGAGTCCACTACTACATTTCCT
ACGGCGCTCTCGCCGCCAACCGAATCCCTTGCCCGCCCCGCTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCTCGCGGCCCCGCTAATCCCTACTCTCGCGGC
TGCACCGCCATCACCCGCTGCCGCCGTTGA
mRNA sequenceShow/hide mRNA sequence
AAGGAGTGAAGGCGGTGGGCATTGATGAGCAACAGCTGTACTCCAATCAGACTCAGACACATCCCCCCACTCTAAGGACACTCCCCTACTCCATCTTCAAGAACTTAATG
TGACGGATTGATTTTCTTCTCTTATTCTCTCCATCCCTTTTTCTCTCTCTATCCCAAATGGCTCCGAAGCTCCTCCTCCTCCTCTTCGCCGCCCTTCTCTTCATCTCCTC
CACTCACGCCCATCTCCCCATCGACACCTCTCTCAAGCTCATGGCCGACGCCCTCGAATGGCCCACCACAATCTCCCTCATCCAACCCGACCAAGAAGATGAACATGAAC
TAGAACAAGACCCTCGTCGATCTCTCTTCTGGAGGCGAGTCCACTACTACATTTCCTACGGCGCTCTCGCCGCCAACCGAATCCCTTGCCCGCCCCGCTCCGGCCGCCCT
TACTACACTCACAACTGCTACAAGGCTCGCGGCCCCGCTAATCCCTACTCTCGCGGCTGCACCGCCATCACCCGCTGCCGCCGTTGATTTCTTCTCAATCCTCTCTCTCT
CTCTTGTCTCTGCATTTTTCCGATCTGAGTTAAACGCCGTCGTATTTCCGTTCTCTGATTCCGATGTGTGGCTCTGGATGTGGACGGTGAGAGATTGTTTATGTGATCTG
TATTGTCGGGTTTTTAGGGCTTGCACGCTAGACGACATGTAGTTTCGGACTTTATTTATTATTCATTTTATTTTACTTTTTGGTGGTTTGTTGCTTTGTTCCGCAATCTA
GGATCGGGAAAACGGCGTCGTTGCGTTGATTGAGGTATTATTGTTAATTAATTGCTATTTAATTATGATAATGTGTACCTTGATATCAGAACCGGATTTTATTTATATAT
AAATTGGAGATTGCTGTTTATTATTATTATTATTGTTTTTTAATGACATTTGATTGATGCTCGAATTACGCCGGAGTGTCGGTGGACGGTGGGGTTTTGTATTATTTTAT
TTTATGTGTGGTAAATTGTTTTTTTTTTTTCAACTGCGGCAGTGTCGGCCATGGAGAACCGTATTGAAATTTGAGATTGGTAATTGGATGAATATGGTTTTCTAGAGCTG
GAAATTAATGGTGTAACTTGATTGCCTCTGGA
Protein sequenceShow/hide protein sequence
MAPKLLLLLFAALLFISSTHAHLPIDTSLKLMADALEWPTTISLIQPDQEDEHELEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPANPYSRG
CTAITRCRR