; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0020961 (gene) of Snake gourd v1 genome

Gene IDTan0020961
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationLG09:58024611..58027241
RNA-Seq ExpressionTan0020961
SyntenyTan0020961
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588219.1 Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-14689.75Show/hide
Query:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG--GGGGGGGIQFHGNNFDGFGFLGGGSSLNS
        MWP SSSS+RPIAG YG TA PPTDMVGLMASG+  GVG+SVLPLLTGLAPSSVGIEE NLMISRGG G  GGGGGGG+QFHGNNFDGFGFLGGGSSLNS
Subjt:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG--GGGGGGGIQFHGNNFDGFGFLGGGSSLNS

Query:  GAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFD
        G GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+LSAAA AAA  GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFD
Subjt:  GAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFD

Query:  TSSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDV
        T SAADMS K+AKKLPEQVRAPAVFKCV+VTAVE  GGG GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP  SDLHLGGGGDGGSTSSPII P+DV
Subjt:  TSSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDV

Query:  YGSSASRGGGLAGGSGYGNPIN
        YGSSA RGGGLAGGSGYGNPIN
Subjt:  YGSSASRGGGLAGGSGYGNPIN

XP_022933450.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita moschata]5.8e-14590Show/hide
Query:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGGIQFHGNNFDGFGFLGGGSSLNSGA
        MWP S+SS+RPIAG YG TA PPTDMVGLMASG+  GVG+SVLPLLTGLAPSSVGIEE NLMISRGGD GGGGGGG+QFHGNNFDGFGFLGGGSSLNSG 
Subjt:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGGIQFHGNNFDGFGFLGGGSSLNSGA

Query:  GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTS
        GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+LSAAA AAAT GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT 
Subjt:  GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTS

Query:  SAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVYG
        SAADMS K+AKKLPEQVRAPAVFKCV+VTAVE  GGG GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP  SDLHLGGGGDGGSTSSPII P+DVYG
Subjt:  SAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVYG

Query:  SSASRGGGLAGGSGYGNPIN
        SSA RGGGLAG SGYGNPIN
Subjt:  SSASRGGGLAGGSGYGNPIN

XP_022974160.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita maxima]5.3e-14690.34Show/hide
Query:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG-GGGGGGGIQFHGNNFDGFGFLGGGSSLNSG
        MWP SSSSSRPIAG YG TA PPTDMVGLMASG+  GVG+SVLPLLTG+APSSVGIEE NLMISRGG G GGGGGGG+QFHGNNFDGFGFLGGGSSLNSG
Subjt:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG-GGGGGGGIQFHGNNFDGFGFLGGGSSLNSG

Query:  AGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT
         GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+LSAAA AAAT GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT
Subjt:  AGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT

Query:  SSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVY
         SAADMS K+AKKLPEQVRAPAVFKCV+VTAVE  GGG GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP  SDLHLGGGGDGGSTSSPII P+DVY
Subjt:  SSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVY

Query:  GSSASRGGGLAGGSGYGNPIN
        GSSA RGGGLAGGSGYGNPIN
Subjt:  GSSASRGGGLAGGSGYGNPIN

XP_022974168.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucurbita maxima]1.1e-14389.72Show/hide
Query:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG-GGGGGGGIQFHGNNFDGFGFLGGGSSLNSG
        MWP SSSSSRPIAG YG TA PPTDMVGLMASG+  GVG+SVLPLLTG+APSSVGIEE NLMISRGG G GGGGGGG+QFHGNNFDGFGFLGGGSSLNSG
Subjt:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG-GGGGGGGIQFHGNNFDGFGFLGGGSSLNSG

Query:  AGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT
         GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+LSAAA AAAT GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT
Subjt:  AGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT

Query:  SSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVY
         S  DMS K+AKKLPEQVRAPAVFKCV+VTAVE  GGG GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP  SDLHLGGGGDGGSTSSPII P+DVY
Subjt:  SSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVY

Query:  GSSASRGGGLAGGSGYGNPIN
        GSSA RGGGLAGGSGYGNPIN
Subjt:  GSSASRGGGLAGGSGYGNPIN

XP_023531847.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-14590.34Show/hide
Query:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG-GGGGGGGIQFHGNNFDGFGFLGGGSSLNSG
        MWP SSSSSRPIAG YG TA PPTDMVGLMASG+  GVG+SVLPLLTGLAPSSVGIEE NLMISRGG G GGGGGGG+QFHGNNFDGFGFLGGGSSLNSG
Subjt:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG-GGGGGGGIQFHGNNFDGFGFLGGGSSLNSG

Query:  AGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT
         GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+LSAAA AAAT GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT
Subjt:  AGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT

Query:  SSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVY
         SAADMS K+AKKLPEQVRAPAVFKCV+VTAVE  GGG GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP  SDLHLGGGGDGGSTSSPII P+DVY
Subjt:  SSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVY

Query:  GSSASRGGGLAGGSGYGNPIN
        GSSA RGGGLAGGSGYGNPI+
Subjt:  GSSASRGGGLAGGSGYGNPIN

TrEMBL top hitse value%identityAlignment
A0A5A7UJ85 Protein LATERAL ROOT PRIMORDIUM 11.5e-13385.31Show/hide
Query:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGGIQFHGNNFDGFGFLGGGSSLNSGA
        MWP    SSRP+  GY  T AP  DMVGLMASGF  GVGVSVLPLLTGLAPSSVGIEEANLMISRGG GG  GGGGIQF+GNN DGFG LGGGSSLNSG 
Subjt:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGGIQFHGNNFDGFGFLGGGSSLNSGA

Query:  GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTS
        GTCHDCGNQAKKDCSHRRCRSCCKSRGFDC+THVKSTWVPAARRRERQ++ AA+DAA  AGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPT SFD S
Subjt:  GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTS

Query:  SAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVYG
        SAADMS KKAKKLPEQ+RAPAVFKCV+VTAVEG G  GGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP  S+LHL   GDGGSTSSP+I P+DVYG
Subjt:  SAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVYG

Query:  SSASRGGGLAGGSGYGNPIN
        SSA+RGGGLAGGSGYGN IN
Subjt:  SSASRGGGLAGGSGYGNPIN

A0A6J1EZ30 protein LATERAL ROOT PRIMORDIUM 1-like isoform X25.9e-14389.38Show/hide
Query:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGGIQFHGNNFDGFGFLGGGSSLNSGA
        MWP S+SS+RPIAG YG TA PPTDMVGLMASG+  GVG+SVLPLLTGLAPSSVGIEE NLMISRGGD GGGGGGG+QFHGNNFDGFGFLGGGSSLNSG 
Subjt:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGGIQFHGNNFDGFGFLGGGSSLNSGA

Query:  GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTS
        GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+LSAAA AAAT GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT 
Subjt:  GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTS

Query:  SAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVYG
        S  DMS K+AKKLPEQVRAPAVFKCV+VTAVE  GGG GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP  SDLHLGGGGDGGSTSSPII P+DVYG
Subjt:  SAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVYG

Query:  SSASRGGGLAGGSGYGNPIN
        SSA RGGGLAG SGYGNPIN
Subjt:  SSASRGGGLAGGSGYGNPIN

A0A6J1F4X3 protein LATERAL ROOT PRIMORDIUM 1-like isoform X12.8e-14590Show/hide
Query:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGGIQFHGNNFDGFGFLGGGSSLNSGA
        MWP S+SS+RPIAG YG TA PPTDMVGLMASG+  GVG+SVLPLLTGLAPSSVGIEE NLMISRGGD GGGGGGG+QFHGNNFDGFGFLGGGSSLNSG 
Subjt:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGGIQFHGNNFDGFGFLGGGSSLNSGA

Query:  GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTS
        GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+LSAAA AAAT GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT 
Subjt:  GTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTS

Query:  SAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVYG
        SAADMS K+AKKLPEQVRAPAVFKCV+VTAVE  GGG GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP  SDLHLGGGGDGGSTSSPII P+DVYG
Subjt:  SAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVYG

Query:  SSASRGGGLAGGSGYGNPIN
        SSA RGGGLAG SGYGNPIN
Subjt:  SSASRGGGLAGGSGYGNPIN

A0A6J1ID91 protein LATERAL ROOT PRIMORDIUM 1-like isoform X12.6e-14690.34Show/hide
Query:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG-GGGGGGGIQFHGNNFDGFGFLGGGSSLNSG
        MWP SSSSSRPIAG YG TA PPTDMVGLMASG+  GVG+SVLPLLTG+APSSVGIEE NLMISRGG G GGGGGGG+QFHGNNFDGFGFLGGGSSLNSG
Subjt:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG-GGGGGGGIQFHGNNFDGFGFLGGGSSLNSG

Query:  AGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT
         GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+LSAAA AAAT GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT
Subjt:  AGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT

Query:  SSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVY
         SAADMS K+AKKLPEQVRAPAVFKCV+VTAVE  GGG GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP  SDLHLGGGGDGGSTSSPII P+DVY
Subjt:  SSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVY

Query:  GSSASRGGGLAGGSGYGNPIN
        GSSA RGGGLAGGSGYGNPIN
Subjt:  GSSASRGGGLAGGSGYGNPIN

A0A6J1IFF1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X25.3e-14489.72Show/hide
Query:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG-GGGGGGGIQFHGNNFDGFGFLGGGSSLNSG
        MWP SSSSSRPIAG YG TA PPTDMVGLMASG+  GVG+SVLPLLTG+APSSVGIEE NLMISRGG G GGGGGGG+QFHGNNFDGFGFLGGGSSLNSG
Subjt:  MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDG-GGGGGGGIQFHGNNFDGFGFLGGGSSLNSG

Query:  AGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT
         GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+LSAAA AAAT GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT
Subjt:  AGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDT

Query:  SSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVY
         S  DMS K+AKKLPEQVRAPAVFKCV+VTAVE  GGG GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP  SDLHLGGGGDGGSTSSPII P+DVY
Subjt:  SSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGGDGGSTSSPIIHPTDVY

Query:  GSSASRGGGLAGGSGYGNPIN
        GSSA RGGGLAGGSGYGNPIN
Subjt:  GSSASRGGGLAGGSGYGNPIN

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 13.0e-2739.56Show/hide
Query:  LNSGAG--TCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP
        + SG G  +C DCGNQAKKDC H RCR+CCKSRGF C THVKSTWVPAA+RRERQ   AA       G  ++ +    K+ R   S ++  S    SNT 
Subjt:  LNSGAG--TCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP

Query:  TRSFDTSSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPSDLHLGGGGDGGSTSSPI---
                    +  +  K P +VR  AVF+C+Q++++E        ++ AYQA V IGGHVFKG LYD G E++  + + +  GG    G ++  +   
Subjt:  TRSFDTSSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPSDLHLGGGGDGGSTSSPI---

Query:  IHPTDVYGSSASRGGGLAGGSGYGN
         H +    ++ +  GG A  +G  N
Subjt:  IHPTDVYGSSASRGGGLAGGSGYGN

O65517 Protein SHI RELATED SEQUENCE 21.1e-2941.01Show/hide
Query:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTSS
        +C DCGNQAKKDC+H RCR+CCKSRGFDC+THV+STW+P ARRRERQ     + +    G  S G+  GG          T    +S+S  P+ S     
Subjt:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTSS

Query:  AADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPSDLHLGGGGDGGSTSSPIIHPTDVYGSSA
         A +   +A   P +V + A+F+CV+++ V+     GG  +YAYQ  V IGGH+FKG LYD G       P   ++ GG  G          +D   SSA
Subjt:  AADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPSDLHLGGGGDGGSTSSPIIHPTDVYGSSA

Query:  SRGGGLAGGSGYGNPIN
          GGG       G+P N
Subjt:  SRGGGLAGGSGYGNPIN

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 11.2e-5249.83Show/hide
Query:  VGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGG-----IQFHGNNFDGFGFLGGGSSLNSGA---GTCHDCGNQAKKDCSHRRCRSCCKSRGFD
        +GV V+PLLT   P    +E++++                    + F   N    G     S   SGA    TC DCGNQAKK+C  RRCR+CCKSRGFD
Subjt:  VGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGG-----IQFHGNNFDGFGFLGGGSSLNSGA---GTCHDCGNQAKKDCSHRRCRSCCKSRGFD

Query:  CATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAPAVFKC
        C+THVKSTWV AARRRERQ++   A+  A   G+S  ++SG KKPR++ S    Q    SHTSTSNTP +SF+TSS+        +  P QVRA AVFKC
Subjt:  CATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAPAVFKC

Query:  VQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGG---DGGSTSSPIIHPTD-VYGSSASRGGG
        V+VTAVE      G +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+PI+ P + VYG     GGG
Subjt:  VQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGG---DGGSTSSPIIHPTD-VYGSSASRGGG

Q9LQZ5 Protein SHI RELATED SEQUENCE 55.1e-2743.01Show/hide
Query:  GGGSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSH----
        GG +    G   C DCGNQAKKDC H RCR+CCKSRGF C THVKSTWVPAA+RRER     A  A+      SS  T   K+ R  +     +      
Subjt:  GGGSSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSH----

Query:  ---TSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARD
           ++ +NT   + +++S  ++S    + LP +V +PA+F+CV+V+++E          YAYQ  V IGGH+FKG LYD G E +D
Subjt:  ---TSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARD

Q9XGX0 Protein SHORT INTERNODES1.3e-2739.04Show/hide
Query:  SSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP
        S   SG  +C DCGNQ+KKDCSH RCR+CCKSRG DC THVKSTWVPAA+RRERQ   +        GG+        ++   I +++T+ ++T   +  
Subjt:  SSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP

Query:  TRSFDTSSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARD---GFPSDLHLGGGGDGGSTSSPI
        T   +  +            P +V + AVF+CV+V++V+         EYAY+  V IGGHVFKG LYD G   R    G    L+L   G   S+SSP 
Subjt:  TRSFDTSSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARD---GFPSDLHLGGGGDGGSTSSPI

Query:  IHPTDVYGSSASRGGGLAGGSGYGNPIN
        +   +    S S          Y  PIN
Subjt:  IHPTDVYGSSASRGGGLAGGSGYGNPIN

Arabidopsis top hitse value%identityAlignment
AT4G36260.1 Lateral root primordium (LRP) protein-related7.8e-3141.01Show/hide
Query:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTSS
        +C DCGNQAKKDC+H RCR+CCKSRGFDC+THV+STW+P ARRRERQ     + +    G  S G+  GG          T    +S+S  P+ S     
Subjt:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTSS

Query:  AADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPSDLHLGGGGDGGSTSSPIIHPTDVYGSSA
         A +   +A   P +V + A+F+CV+++ V+     GG  +YAYQ  V IGGH+FKG LYD G       P   ++ GG  G          +D   SSA
Subjt:  AADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPSDLHLGGGGDGGSTSSPIIHPTDVYGSSA

Query:  SRGGGLAGGSGYGNPIN
          GGG       G+P N
Subjt:  SRGGGLAGGSGYGNPIN

AT5G12330.1 Lateral root primordium (LRP) protein-related8.6e-5449.83Show/hide
Query:  VGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGG-----IQFHGNNFDGFGFLGGGSSLNSGA---GTCHDCGNQAKKDCSHRRCRSCCKSRGFD
        +GV V+PLLT   P    +E++++                    + F   N    G     S   SGA    TC DCGNQAKK+C  RRCR+CCKSRGFD
Subjt:  VGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGG-----IQFHGNNFDGFGFLGGGSSLNSGA---GTCHDCGNQAKKDCSHRRCRSCCKSRGFD

Query:  CATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAPAVFKC
        C+THVKSTWV AARRRERQ++   A+  A   G+S  ++SG KKPR++ S    Q    SHTSTSNTP +SF+TSS+        +  P QVRA AVFKC
Subjt:  CATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAPAVFKC

Query:  VQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGG---DGGSTSSPIIHPTD-VYGSSASRGGG
        V+VTAVE      G +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+PI+ P + VYG     GGG
Subjt:  VQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGG---DGGSTSSPIIHPTD-VYGSSASRGGG

AT5G12330.2 Lateral root primordium (LRP) protein-related8.6e-5449.83Show/hide
Query:  VGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGG-----IQFHGNNFDGFGFLGGGSSLNSGA---GTCHDCGNQAKKDCSHRRCRSCCKSRGFD
        +GV V+PLLT   P    +E++++                    + F   N    G     S   SGA    TC DCGNQAKK+C  RRCR+CCKSRGFD
Subjt:  VGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGG-----IQFHGNNFDGFGFLGGGSSLNSGA---GTCHDCGNQAKKDCSHRRCRSCCKSRGFD

Query:  CATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAPAVFKC
        C+THVKSTWV AARRRERQ++   A+  A   G+S  ++SG KKPR++ S    Q    SHTSTSNTP +SF+TSS+        +  P QVRA AVFKC
Subjt:  CATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAPAVFKC

Query:  VQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGG---DGGSTSSPIIHPTD-VYGSSASRGGG
        V+VTAVE      G +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+PI+ P + VYG     GGG
Subjt:  VQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGG---DGGSTSSPIIHPTD-VYGSSASRGGG

AT5G12330.4 Lateral root primordium (LRP) protein-related8.6e-5449.83Show/hide
Query:  VGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGG-----IQFHGNNFDGFGFLGGGSSLNSGA---GTCHDCGNQAKKDCSHRRCRSCCKSRGFD
        +GV V+PLLT   P    +E++++                    + F   N    G     S   SGA    TC DCGNQAKK+C  RRCR+CCKSRGFD
Subjt:  VGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGG-----IQFHGNNFDGFGFLGGGSSLNSGA---GTCHDCGNQAKKDCSHRRCRSCCKSRGFD

Query:  CATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAPAVFKC
        C+THVKSTWV AARRRERQ++   A+  A   G+S  ++SG KKPR++ S    Q    SHTSTSNTP +SF+TSS+        +  P QVRA AVFKC
Subjt:  CATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAPAVFKC

Query:  VQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGG---DGGSTSSPIIHPTD-VYGSSASRGGG
        V+VTAVE      G +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+PI+ P + VYG     GGG
Subjt:  VQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP--SDLHLGGGG---DGGSTSSPIIHPTD-VYGSSASRGGG

AT5G66350.1 Lateral root primordium (LRP) protein-related9.6e-2939.04Show/hide
Query:  SSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP
        S   SG  +C DCGNQ+KKDCSH RCR+CCKSRG DC THVKSTWVPAA+RRERQ   +        GG+        ++   I +++T+ ++T   +  
Subjt:  SSLNSGAGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTP

Query:  TRSFDTSSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARD---GFPSDLHLGGGGDGGSTSSPI
        T   +  +            P +V + AVF+CV+V++V+         EYAY+  V IGGHVFKG LYD G   R    G    L+L   G   S+SSP 
Subjt:  TRSFDTSSAADMSCKKAKKLPEQVRAPAVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARD---GFPSDLHLGGGGDGGSTSSPI

Query:  IHPTDVYGSSASRGGGLAGGSGYGNPIN
        +   +    S S          Y  PIN
Subjt:  IHPTDVYGSSASRGGGLAGGSGYGNPIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCCCTCCTCCTCCTCCTCCTCCAGACCCATCGCCGGTGGGTATGGCCCCACGGCAGCGCCGCCGACGGACATGGTGGGTCTCATGGCCTCTGGCTTCGGCGTCGG
CGTCGGCGTTAGCGTTTTGCCTCTCCTTACTGGGCTTGCGCCGTCGAGTGTTGGAATTGAAGAAGCTAATTTGATGATCAGCCGCGGCGGCGATGGCGGCGGCGGTGGAG
GTGGTGGGATTCAATTTCATGGGAATAATTTTGATGGGTTTGGGTTTTTGGGAGGTGGGTCGAGTTTGAATTCCGGCGCCGGAACTTGCCATGACTGTGGGAACCAAGCG
AAGAAAGACTGCAGCCATCGCCGGTGCCGGAGCTGCTGTAAAAGCCGAGGTTTTGATTGTGCTACTCACGTGAAGAGCACGTGGGTTCCTGCAGCCAGGAGGAGAGAAAG
GCAGTTGCTGAGCGCTGCCGCAGACGCCGCCGCGACCGCCGGCGGGACATCATCGGGGTCCACCTCCGGCGGGAAAAAGCCGAGGCTAATTGCATCACAGACAACTACCA
ATTCTCACACTTCCACTTCCAATACTCCAACACGAAGCTTCGACACTTCTTCAGCTGCCGATATGAGTTGTAAAAAGGCAAAGAAGCTGCCGGAGCAAGTACGAGCGCCG
GCGGTGTTCAAGTGCGTCCAGGTGACGGCGGTGGAGGGCAGTGGCGGCGGCGGTGGCGGGAATGAATATGCATATCAAGCCGTCGTGAAGATCGGCGGCCATGTCTTCAA
AGGTTATTTATACGACCATGGAGTGGAAGCTAGAGATGGATTTCCCTCGGATTTGCATCTTGGAGGAGGCGGAGATGGCGGTTCGACATCGTCGCCGATCATCCATCCTA
CTGATGTTTATGGAAGCTCCGCCAGCCGCGGCGGAGGACTGGCTGGAGGTTCCGGCTATGGTAATCCAATAAATTGA
mRNA sequenceShow/hide mRNA sequence
CTCTCATTTCTCAACTCTCAATTCAAAATCGCTTTTTTTTTCTCTCTCTCTAAATTACAAACTTTTTAACAACATTCATATATTTCTTCTTAGAATTCATGTTTCTGTCA
GTTTCTAAGTACCTAAGATCCAATTAGATCTCTTCAAATTTTAATTTTAATTTCAGAGAGATTTTATTTACAATTAGGGTTTTTTTTTGTCTCGCCGGAGATTCATTAGC
TGTGGCTGCCGCACGCCGTCTTCCTTCCGATTCCGGTGCCTTCGCCGACTGGGTGGCTCCTCCCTCTGCCGCCGATGAACTTTCTCTCGGTTTCAATTCCGGTGCCGCCG
TTGCCAGGATGTGGCCCTCCTCCTCCTCCTCCTCCAGACCCATCGCCGGTGGGTATGGCCCCACGGCAGCGCCGCCGACGGACATGGTGGGTCTCATGGCCTCTGGCTTC
GGCGTCGGCGTCGGCGTTAGCGTTTTGCCTCTCCTTACTGGGCTTGCGCCGTCGAGTGTTGGAATTGAAGAAGCTAATTTGATGATCAGCCGCGGCGGCGATGGCGGCGG
CGGTGGAGGTGGTGGGATTCAATTTCATGGGAATAATTTTGATGGGTTTGGGTTTTTGGGAGGTGGGTCGAGTTTGAATTCCGGCGCCGGAACTTGCCATGACTGTGGGA
ACCAAGCGAAGAAAGACTGCAGCCATCGCCGGTGCCGGAGCTGCTGTAAAAGCCGAGGTTTTGATTGTGCTACTCACGTGAAGAGCACGTGGGTTCCTGCAGCCAGGAGG
AGAGAAAGGCAGTTGCTGAGCGCTGCCGCAGACGCCGCCGCGACCGCCGGCGGGACATCATCGGGGTCCACCTCCGGCGGGAAAAAGCCGAGGCTAATTGCATCACAGAC
AACTACCAATTCTCACACTTCCACTTCCAATACTCCAACACGAAGCTTCGACACTTCTTCAGCTGCCGATATGAGTTGTAAAAAGGCAAAGAAGCTGCCGGAGCAAGTAC
GAGCGCCGGCGGTGTTCAAGTGCGTCCAGGTGACGGCGGTGGAGGGCAGTGGCGGCGGCGGTGGCGGGAATGAATATGCATATCAAGCCGTCGTGAAGATCGGCGGCCAT
GTCTTCAAAGGTTATTTATACGACCATGGAGTGGAAGCTAGAGATGGATTTCCCTCGGATTTGCATCTTGGAGGAGGCGGAGATGGCGGTTCGACATCGTCGCCGATCAT
CCATCCTACTGATGTTTATGGAAGCTCCGCCAGCCGCGGCGGAGGACTGGCTGGAGGTTCCGGCTATGGTAATCCAATAAATTGAGTTGTTTTTGATCCATATTTAAACA
TGTTCAATGTTTGGTTATAGCATTTGAATTTGTTTAGTGGAAAAATAAGAGATAGAAG
Protein sequenceShow/hide protein sequence
MWPSSSSSSRPIAGGYGPTAAPPTDMVGLMASGFGVGVGVSVLPLLTGLAPSSVGIEEANLMISRGGDGGGGGGGGIQFHGNNFDGFGFLGGGSSLNSGAGTCHDCGNQA
KKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQLLSAAADAAATAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTRSFDTSSAADMSCKKAKKLPEQVRAP
AVFKCVQVTAVEGSGGGGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPSDLHLGGGGDGGSTSSPIIHPTDVYGSSASRGGGLAGGSGYGNPIN