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Tan0020972 (gene) of Snake gourd v1 genome

Gene IDTan0020972
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:11372931..11373206
RNA-Seq ExpressionTan0020972
SyntenyTan0020972
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605894.1 hypothetical protein SDJN03_03211, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1068.18Show/hide
Query:  MIFRHYKSAPLTRTQNESRRLLLISSLSSFSTNRNKTRRGTKSAES-EITSLRVAPPSKSNPTQNK
        M FR ++S  L   + ESRRLLL+SSLSSFSTNRNKT+ G+  A+S + TSLRVAPPSKSNPTQNK
Subjt:  MIFRHYKSAPLTRTQNESRRLLLISSLSSFSTNRNKTRRGTKSAES-EITSLRVAPPSKSNPTQNK
KAG7035836.1 hypothetical protein SDJN02_02635, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-1068.18Show/hide
Query:  MIFRHYKSAPLTRTQNESRRLLLISSLSSFSTNRNKTRRGTKSAES-EITSLRVAPPSKSNPTQNK
        M FR ++S  L   + ESRRLLL+SSLSSFSTNRNKT+ G+  A+S + TSLRVAPPSKSNPTQNK
Subjt:  MIFRHYKSAPLTRTQNESRRLLLISSLSSFSTNRNKTRRGTKSAES-EITSLRVAPPSKSNPTQNK
KGN54151.1 hypothetical protein Csa_017955 [Cucumis sativus]1.7e-0959.57Show/hide
Query:  MKLPRT-AALVCFFVFIILISIFIPFPMIFRHYKSAPLTRTQN--ESRRLLLISSLSSFSTNRNKTRRGTKSAESEITSLRVAPPSKSNPTQNK
        MK+PRT  ALVC  + ++LISIFI FP+   H++S  L  T    ESRRLLL SSLSSFS N NK      S+ S   SLRVAPPSKSNPTQNK
Subjt:  MKLPRT-AALVCFFVFIILISIFIPFPMIFRHYKSAPLTRTQN--ESRRLLLISSLSSFSTNRNKTRRGTKSAESEITSLRVAPPSKSNPTQNK
TrEMBL top hitse value%identityAlignment
A0A0A0L1X3 Uncharacterized protein8.4e-1059.57Show/hide
Query:  MKLPRT-AALVCFFVFIILISIFIPFPMIFRHYKSAPLTRTQN--ESRRLLLISSLSSFSTNRNKTRRGTKSAESEITSLRVAPPSKSNPTQNK
        MK+PRT  ALVC  + ++LISIFI FP+   H++S  L  T    ESRRLLL SSLSSFS N NK      S+ S   SLRVAPPSKSNPTQNK
Subjt:  MKLPRT-AALVCFFVFIILISIFIPFPMIFRHYKSAPLTRTQN--ESRRLLLISSLSSFSTNRNKTRRGTKSAESEITSLRVAPPSKSNPTQNK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTCCCTCGCACTGCAGCTCTGGTCTGTTTCTTCGTCTTCATTATCCTCATCTCCATTTTCATTCCTTTTCCAATGATATTCCGCCATTACAAATCTGCTCCTCT
TACCAGAACCCAAAATGAATCCAGAAGACTGCTCCTAATTTCTTCACTTTCCTCCTTCTCGACAAATAGGAACAAGACCCGTAGAGGCACTAAATCTGCAGAGTCAGAGA
TCACGAGTCTCAGAGTGGCGCCGCCAAGCAAATCAAATCCCACGCAGAACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTCCCTCGCACTGCAGCTCTGGTCTGTTTCTTCGTCTTCATTATCCTCATCTCCATTTTCATTCCTTTTCCAATGATATTCCGCCATTACAAATCTGCTCCTCT
TACCAGAACCCAAAATGAATCCAGAAGACTGCTCCTAATTTCTTCACTTTCCTCCTTCTCGACAAATAGGAACAAGACCCGTAGAGGCACTAAATCTGCAGAGTCAGAGA
TCACGAGTCTCAGAGTGGCGCCGCCAAGCAAATCAAATCCCACGCAGAACAAGTAA
Protein sequenceShow/hide protein sequence
MKLPRTAALVCFFVFIILISIFIPFPMIFRHYKSAPLTRTQNESRRLLLISSLSSFSTNRNKTRRGTKSAESEITSLRVAPPSKSNPTQNK