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Tan0021029 (gene) of Snake gourd v1 genome

Gene IDTan0021029
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlutamate--tRNA ligase
Genome locationLG04:87538808..87539164
RNA-Seq ExpressionTan0021029
SyntenyTan0021029
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058525.1 putative transmembrane protein [Cucumis melo var. makuwa]5.0e-4181.51Show/hide
Query:  MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSD-PSWVLKIGSSSWGLAGIL
        M+SNY +Y NQNSS RPLAIVLALASAV LSPLRS+ET WSSGFV+PLVLLGLII IKTSS CSS S     RDSAIL SD PSWVLKIGSSSWGLAGIL
Subjt:  MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSD-PSWVLKIGSSSWGLAGIL

Query:  VMLLLGLSWQNSVQEFLWR
        +ML+LGLSWQ+SVQEFLWR
Subjt:  VMLLLGLSWQNSVQEFLWR

KAE8637311.1 hypothetical protein CSA_023553, partial [Cucumis sativus]1.5e-4282.35Show/hide
Query:  MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSD-PSWVLKIGSSSWGLAGIL
        M+SNY +Y NQNSSQRPLAI LALASAVVLSPLRS+ET WSSGFV+PLVLLGLI+ IKTSSSCSS S     RDSAIL SD PSWVLKIGSSSWGLAGIL
Subjt:  MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSD-PSWVLKIGSSSWGLAGIL

Query:  VMLLLGLSWQNSVQEFLWR
        +ML+LGLSWQ+SVQEFLWR
Subjt:  VMLLLGLSWQNSVQEFLWR

KAF3958642.1 hypothetical protein CMV_016470 [Castanea mollissima]2.9e-3370Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGI
        +YT+Q SSQR +A+VLAL SA+VLSPL        R  ET+WSSGFVLP+VL GLII IKT+SSCSSMS +   R S I S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGI

Query:  LVMLLLGLSWQNSVQEFLWR
        LVMLLL LSWQ SVQEF WR
Subjt:  LVMLLLGLSWQNSVQEFLWR

KAG6581812.1 hypothetical protein SDJN03_21814, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4887.29Show/hide
Query:  MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGILV
        M+SNYG+YTNQ SSQRPLAIVLALASAVVLSPLR +E+RWSSGFVLPLVLL LII IKTSSSCSSMST+RRERDSAILSSDPSWVLKIGSSSWGLAG+L+
Subjt:  MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGILV

Query:  MLLLGLSWQNSVQEFLWR
        ML+ GLSWQ+SV+EFLWR
Subjt:  MLLLGLSWQNSVQEFLWR

XP_030969466.1 uncharacterized protein LOC115989757 [Quercus lobata]1.1e-3270Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGI
        +YT+Q SSQR +A+VLAL SA+VLSPL        R +ET+WSSGFVLP+VL GLII IKT+SSCSSMS +   R S I S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGI

Query:  LVMLLLGLSWQNSVQEFLWR
        LVMLLL LSWQ SVQEF WR
Subjt:  LVMLLLGLSWQNSVQEFLWR

TrEMBL top hitse value%identityAlignment
A0A0A0LEN3 Uncharacterized protein7.5e-4382.35Show/hide
Query:  MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSD-PSWVLKIGSSSWGLAGIL
        M+SNY +Y NQNSSQRPLAI LALASAVVLSPLRS+ET WSSGFV+PLVLLGLI+ IKTSSSCSS S     RDSAIL SD PSWVLKIGSSSWGLAGIL
Subjt:  MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSD-PSWVLKIGSSSWGLAGIL

Query:  VMLLLGLSWQNSVQEFLWR
        +ML+LGLSWQ+SVQEFLWR
Subjt:  VMLLLGLSWQNSVQEFLWR

A0A2N9IBH6 Uncharacterized protein5.4e-3367.5Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPLRS--------FETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGI
        +YT Q SSQR +A+VL+L SA+VLSPL +        +ET+WSSGFVLP+VL+GLII I+T+SSCSSMS +   R S I S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPLRS--------FETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGI

Query:  LVMLLLGLSWQNSVQEFLWR
        LVMLLL LSWQ SVQEF WR
Subjt:  LVMLLLGLSWQNSVQEFLWR

A0A314UYU2 Uncharacterized protein3.8e-3162.81Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPL---------RSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAG
        +YT+ +SSQR  A+VLAL SA+VLSPL         R +ET+WSSGFVLP+V  GLII IKT+SS SS S+   + DS + S +PSWVL+IGSSSWGLAG
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPL---------RSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAG

Query:  ILVMLLLGLSWQNSVQEFLWR
        +LV+L+L LSWQ SVQEFLWR
Subjt:  ILVMLLLGLSWQNSVQEFLWR

A0A5A7UY99 Putative transmembrane protein2.4e-4181.51Show/hide
Query:  MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSD-PSWVLKIGSSSWGLAGIL
        M+SNY +Y NQNSS RPLAIVLALASAV LSPLRS+ET WSSGFV+PLVLLGLII IKTSS CSS S     RDSAIL SD PSWVLKIGSSSWGLAGIL
Subjt:  MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSD-PSWVLKIGSSSWGLAGIL

Query:  VMLLLGLSWQNSVQEFLWR
        +ML+LGLSWQ+SVQEFLWR
Subjt:  VMLLLGLSWQNSVQEFLWR

A0A7N2LMQ6 Uncharacterized protein5.4e-3370Show/hide
Query:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGI
        +YT+Q SSQR +A+VLAL SA+VLSPL        R +ET+WSSGFVLP+VL GLII IKT+SSCSSMS +   R S I S DPSWVL+IGSSSWGLAGI
Subjt:  SYTNQNSSQRPLAIVLALASAVVLSPL--------RSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGI

Query:  LVMLLLGLSWQNSVQEFLWR
        LVMLLL LSWQ SVQEF WR
Subjt:  LVMLLLGLSWQNSVQEFLWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGTAACTATGGCTCTTACACAAACCAGAACTCGTCTCAGAGGCCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTAGTGCTTTCGCCATTAAGATCCTTTGA
AACCAGATGGAGCTCTGGTTTTGTTCTTCCACTGGTTCTTTTGGGGCTTATAATAGGCATTAAGACATCTTCCTCTTGCTCATCCATGTCCACAGAGAGAAGGGAGAGAG
ATTCTGCAATTCTCTCTTCAGATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCTGGGATTTTAGTGATGTTGCTTCTTGGACTTTCTTGGCAAAAT
TCTGTTCAAGAATTCCTCTGGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGTAACTATGGCTCTTACACAAACCAGAACTCGTCTCAGAGGCCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTAGTGCTTTCGCCATTAAGATCCTTTGA
AACCAGATGGAGCTCTGGTTTTGTTCTTCCACTGGTTCTTTTGGGGCTTATAATAGGCATTAAGACATCTTCCTCTTGCTCATCCATGTCCACAGAGAGAAGGGAGAGAG
ATTCTGCAATTCTCTCTTCAGATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCTGGGATTTTAGTGATGTTGCTTCTTGGACTTTCTTGGCAAAAT
TCTGTTCAAGAATTCCTCTGGAGATAG
Protein sequenceShow/hide protein sequence
MESNYGSYTNQNSSQRPLAIVLALASAVVLSPLRSFETRWSSGFVLPLVLLGLIIGIKTSSSCSSMSTERRERDSAILSSDPSWVLKIGSSSWGLAGILVMLLLGLSWQN
SVQEFLWR