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Tan0021053 (gene) of Snake gourd v1 genome

Gene IDTan0021053
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG05:44604461..44604703
RNA-Seq ExpressionTan0021053
SyntenyTan0021053
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-2373.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM EG SVREH LNMMVH NVAE+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-2373.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM EG SVREH LNMMVH NVAE+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-2373.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM EG SVREH LNMMVH NVAE+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-2373.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM EG SVREH LNMMVH NVAE+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]8.3e-2473.42Show/hide
Query:  ITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
        +T KEIM SLQ+MFGQPS    ++ALK+VYNSRMKEG+SVREH LN+MVH NVAE NG+VIDE SQ SFI+ESLPK+FL
Subjt:  ITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein5.3e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM EG SVREH LNMMVH NVAE+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
A0A5A7TU93 Gag/pol protein5.3e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM EG SVREH LNMMVH NVAE+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
A0A5A7V4M1 Gag/pol protein5.3e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM EG SVREH LNMMVH NVAE+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
A0A5D3CPJ6 Gag/pol protein5.3e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM EG SVREH LNMMVH NVAE+NG VIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
A0A6J1DWL0 uncharacterized protein LOC1110247344.0e-2473.42Show/hide
Query:  ITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
        +T KEIM SLQ+MFGQPS    ++ALK+VYNSRMKEG+SVREH LN+MVH NVAE NG+VIDE SQ SFI+ESLPK+FL
Subjt:  ITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCGCAAAGGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGGTCTGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
GGGAACATCTGTTAGGGAGCATGCCCTTAATATGATGGTCCACATCAACGTGGCAGAGGTAAACGGGGTTGTCATTGATGAGAACAGTCAGGTTAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCACCGCAAAGGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGGTCTGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
GGGAACATCTGTTAGGGAGCATGCCCTTAATATGATGGTCCACATCAACGTGGCAGAGGTAAACGGGGTTGTCATTGATGAGAACAGTCAGGTTAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTATAG
Protein sequenceShow/hide protein sequence
MITAKEIMGSLQAMFGQPSSSVCYDALKYVYNSRMKEGTSVREHALNMMVHINVAEVNGVVIDENSQVSFIMESLPKSFL