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Tan0021056 (gene) of Snake gourd v1 genome

Gene IDTan0021056
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:6635737..6636270
RNA-Seq ExpressionTan0021056
SyntenyTan0021056
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601256.1 Tetratricopeptide repeat protein 5, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3269.49Show/hide
Query:  FRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSDAKLDRGFDRKIVKKFALISECLE
        F  PS WRRRPSDHRRAPRCHGGV DE NQKDIVEANLTVL+ARMEDLRKKERR+PLP R GG+E DNG  Y S  DAKL    D K+VK FALIS CLE
Subjt:  FRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSDAKLDRGFDRKIVKKFALISECLE

Query:  VMT---MVGAAFGLVLVG
         +    +VG+A   V VG
Subjt:  VMT---MVGAAFGLVLVG

XP_008446686.1 PREDICTED: uncharacterized protein LOC103489333 [Cucumis melo]3.1e-3767.36Show/hide
Query:  ASAHLPSFH-FRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLP---ARRGGLEFDNGRSYSSMSDAKLDRG-FDR
        +SA LPSFH F  PSS +RRPSDH  APRCH    DEEN+KDIVEANLTVLR RMEDLRKKERR+P+P    +RG  EFD+GR Y S   +KLD G FD 
Subjt:  ASAHLPSFH-FRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLP---ARRGGLEFDNGRSYSSMSDAKLDRG-FDR

Query:  KIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF
        K +K  ALIS CLEV++ VG A GLV VGGSLGICLVS +VRHF
Subjt:  KIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF

XP_011655810.1 uncharacterized protein LOC105435587 [Cucumis sativus]4.9e-3565.97Show/hide
Query:  MASAHLPSFH-FRNPSSWRRRP-SDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGL-EFDNGRSYSSMSDAKLDRG-FDR
        MASA LPSFH F  PSS RRRP SDHR APRCHG   DEEN+KDIVEANLTVLR RMEDLRKKER +P+  R+ G+ E D+G  Y      KLD G FD 
Subjt:  MASAHLPSFH-FRNPSSWRRRP-SDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGL-EFDNGRSYSSMSDAKLDRG-FDR

Query:  KIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF
        K +K   LIS CLEV++ VG A GLV VGGSLGIC VS +VRHF
Subjt:  KIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF

XP_022150638.1 uncharacterized protein LOC111018723 [Momordica charantia]8.6e-4876.92Show/hide
Query:  ASAHLPSFHFRNPSSWRRRP-SDHRRAPRCHGGV-DDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSDAKLDRGFDRKIV
        +SA L SFHFR+PSSWRRRP +DHRRAPRCH GV DDEENQKDIVEANLTVLR RMEDLRKKERR  +PA  G +EFDN  SY S SDAKLDR  +RK+V
Subjt:  ASAHLPSFHFRNPSSWRRRP-SDHRRAPRCHGGV-DDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSDAKLDRGFDRKIV

Query:  KKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHFGN
        K FALISECLEV++M G A GLVLVGGSLGICLVSLL+RH  N
Subjt:  KKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHFGN

XP_038893300.1 uncharacterized protein LOC120082131 isoform X1 [Benincasa hispida]2.1e-5482.27Show/hide
Query:  MASAHLPSFHFRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSD-AKLDRGFDRKIV
        MASA  PSFHF +P S RRRPSDHRRAPRCHGGV DEENQKDIV+ANLTVLRARMEDLRKKERR+PLPARRGGLEFDNG  Y SMSD AK DR FD KI+
Subjt:  MASAHLPSFHFRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSD-AKLDRGFDRKIV

Query:  KKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF
        KKFALI+ CLEV+T VG A GLV VGGSLGICLV+LLVRHF
Subjt:  KKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF

TrEMBL top hitse value%identityAlignment
A0A0A0KRA6 Uncharacterized protein2.4e-3565.97Show/hide
Query:  MASAHLPSFH-FRNPSSWRRRP-SDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGL-EFDNGRSYSSMSDAKLDRG-FDR
        MASA LPSFH F  PSS RRRP SDHR APRCHG   DEEN+KDIVEANLTVLR RMEDLRKKER +P+  R+ G+ E D+G  Y      KLD G FD 
Subjt:  MASAHLPSFH-FRNPSSWRRRP-SDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGL-EFDNGRSYSSMSDAKLDRG-FDR

Query:  KIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF
        K +K   LIS CLEV++ VG A GLV VGGSLGIC VS +VRHF
Subjt:  KIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF

A0A1Q3CT71 Uncharacterized protein (Fragment)5.7e-0540.2Show/hide
Query:  NQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSDAKLDRGFDRKIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVR
        N  +IV+ANL+ LR R+ ++RKKE       ++   +  NG +Y S        G+D    K+ A++SE +E++  V  A G+V++ GSL ICLVSLLV 
Subjt:  NQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSDAKLDRGFDRKIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVR

Query:  HF
        HF
Subjt:  HF

A0A1S3BFP0 uncharacterized protein LOC1034893331.5e-3767.36Show/hide
Query:  ASAHLPSFH-FRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLP---ARRGGLEFDNGRSYSSMSDAKLDRG-FDR
        +SA LPSFH F  PSS +RRPSDH  APRCH    DEEN+KDIVEANLTVLR RMEDLRKKERR+P+P    +RG  EFD+GR Y S   +KLD G FD 
Subjt:  ASAHLPSFH-FRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLP---ARRGGLEFDNGRSYSSMSDAKLDRG-FDR

Query:  KIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF
        K +K  ALIS CLEV++ VG A GLV VGGSLGICLVS +VRHF
Subjt:  KIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF

A0A5A7SXL4 Uncharacterized protein1.5e-3767.36Show/hide
Query:  ASAHLPSFH-FRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLP---ARRGGLEFDNGRSYSSMSDAKLDRG-FDR
        +SA LPSFH F  PSS +RRPSDH  APRCH    DEEN+KDIVEANLTVLR RMEDLRKKERR+P+P    +RG  EFD+GR Y S   +KLD G FD 
Subjt:  ASAHLPSFH-FRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLP---ARRGGLEFDNGRSYSSMSDAKLDRG-FDR

Query:  KIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF
        K +K  ALIS CLEV++ VG A GLV VGGSLGICLVS +VRHF
Subjt:  KIVKKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHF

A0A6J1D9Z1 uncharacterized protein LOC1110187234.2e-4876.92Show/hide
Query:  ASAHLPSFHFRNPSSWRRRP-SDHRRAPRCHGGV-DDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSDAKLDRGFDRKIV
        +SA L SFHFR+PSSWRRRP +DHRRAPRCH GV DDEENQKDIVEANLTVLR RMEDLRKKERR  +PA  G +EFDN  SY S SDAKLDR  +RK+V
Subjt:  ASAHLPSFHFRNPSSWRRRP-SDHRRAPRCHGGV-DDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSDAKLDRGFDRKIV

Query:  KKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHFGN
        K FALISECLEV++M G A GLVLVGGSLGICLVSLL+RH  N
Subjt:  KKFALISECLEVMTMVGAAFGLVLVGGSLGICLVSLLVRHFGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGCTCATCTCCCGTCGTTTCACTTCCGCAATCCGTCTTCTTGGCGGCGAAGGCCATCGGACCACCGCAGAGCTCCGAGATGCCACGGCGGCGTCGACGATGA
AGAGAATCAAAAGGACATCGTGGAAGCGAACTTGACGGTGTTGAGAGCGAGAATGGAGGATTTGAGGAAGAAGGAGCGGCGGCTTCCGCTTCCGGCACGTCGCGGTGGAC
TCGAATTCGATAATGGCCGGAGCTATTCGTCGATGAGCGATGCGAAGTTGGATCGCGGTTTCGATCGCAAGATTGTGAAAAAATTTGCCCTAATTTCAGAGTGCTTGGAG
GTGATGACTATGGTTGGTGCTGCATTTGGGCTCGTTCTTGTTGGTGGATCTTTAGGCATCTGTTTGGTTTCTCTTTTAGTTCGTCATTTTGGTAATTGA
mRNA sequenceShow/hide mRNA sequence
CCAGCATGGTGCAAAATGGCTTCTGCTCATCTCCCGTCGTTTCACTTCCGCAATCCGTCTTCTTGGCGGCGAAGGCCATCGGACCACCGCAGAGCTCCGAGATGCCACGG
CGGCGTCGACGATGAAGAGAATCAAAAGGACATCGTGGAAGCGAACTTGACGGTGTTGAGAGCGAGAATGGAGGATTTGAGGAAGAAGGAGCGGCGGCTTCCGCTTCCGG
CACGTCGCGGTGGACTCGAATTCGATAATGGCCGGAGCTATTCGTCGATGAGCGATGCGAAGTTGGATCGCGGTTTCGATCGCAAGATTGTGAAAAAATTTGCCCTAATT
TCAGAGTGCTTGGAGGTGATGACTATGGTTGGTGCTGCATTTGGGCTCGTTCTTGTTGGTGGATCTTTAGGCATCTGTTTGGTTTCTCTTTTAGTTCGTCATTTTGGTAA
TTGA
Protein sequenceShow/hide protein sequence
MASAHLPSFHFRNPSSWRRRPSDHRRAPRCHGGVDDEENQKDIVEANLTVLRARMEDLRKKERRLPLPARRGGLEFDNGRSYSSMSDAKLDRGFDRKIVKKFALISECLE
VMTMVGAAFGLVLVGGSLGICLVSLLVRHFGN