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Tan0021125 (gene) of Snake gourd v1 genome

Gene IDTan0021125
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRegulator of rDNA transcription protein 15
Genome locationLG09:5359324..5359578
RNA-Seq ExpressionTan0021125
SyntenyTan0021125
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7024912.1 unnamed protein product [Microthlaspi erraticum]5.7e-1561.25Show/hide
Query:  RQEKSTKWICNLEKRIG-SGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT
        RQ KS KWI N  K +     +GGPS +PVGC  TAR  SA RA+R +  GGRT N SFG +PRA NSQLRTG DKGNPT
Subjt:  RQEKSTKWICNLEKRIG-SGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT

KAF3320278.1 hypothetical protein FCM35_KLT22090 [Carex littledalei]2.0e-1559.52Show/hide
Query:  MEQCRQEKSTKWICNLEKRIG-SGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT
        MEQCRQ KS K I N  K +      GGP P+PVGCR TAR   A RA RR+  GGR  NG  G  PRA NS+LRTG DKGNPT
Subjt:  MEQCRQEKSTKWICNLEKRIG-SGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT

KAF3327859.1 hypothetical protein FCM35_KLT06465 [Carex littledalei]8.8e-1660.71Show/hide
Query:  MEQCRQEKSTKWICNLEKRIG-SGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT
        MEQCRQ KS K I N  K +      GGP P+PVGCR TAR  SA RA RR+  GGR  NG  G  PRA NS+LRTG DKGNPT
Subjt:  MEQCRQEKSTKWICNLEKRIG-SGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT

KMS95150.1 hypothetical protein BVRB_011880 [Beta vulgaris subsp. vulgaris]5.1e-1663.86Show/hide
Query:  MEQCRQEKSTKWICNLEKRIGSGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT
        MEQCRQ KS K    L  R G    GGPSP+PVGCRWTAR   A RA RRM  G R+ NGSF   PRA NSQLRT  DKGNPT
Subjt:  MEQCRQEKSTKWICNLEKRIGSGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT

PHT26828.1 Regulator of rDNA transcription protein 15 [Capsicum baccatum]2.3e-1677.59Show/hide
Query:  GGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT
        GGPSP+PVGCRWTAR  +A R  RRM  GGRTRNGSFG  PRA NSQLRTG DKGNPT
Subjt:  GGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT

TrEMBL top hitse value%identityAlignment
A0A0J8DWB8 Uncharacterized protein2.5e-1663.86Show/hide
Query:  MEQCRQEKSTKWICNLEKRIGSGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT
        MEQCRQ KS K    L  R G    GGPSP+PVGCRWTAR   A RA RRM  G R+ NGSF   PRA NSQLRT  DKGNPT
Subjt:  MEQCRQEKSTKWICNLEKRIGSGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT

A0A2G2V0S9 Regulator of rDNA transcription protein 151.0e-1474.14Show/hide
Query:  GGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT
        GGPSP+PVGCRWTAR + ATRA RR+  GGRT NGSFG+ PRA NSQLRTG DKG+ T
Subjt:  GGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT

A0A2G2V1N9 Regulator of rDNA transcription protein 151.1e-1677.59Show/hide
Query:  GGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT
        GGPSP+PVGCRWTAR  +A R  RRM  GGRTRNGSFG  PRA NSQLRTG DKGNPT
Subjt:  GGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT

A0A6A5L3R0 Uncharacterized protein2.8e-1569.23Show/hide
Query:  MEQCRQEKSTKWICNLEKRIGS-GWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGS
        MEQCRQ KS KWI NL KRIGS GW  GPSP+PVGCRWTAR   A RA RR+  GGR  NG FG+
Subjt:  MEQCRQEKSTKWICNLEKRIGS-GWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGS

A0A6D2I5H0 Uncharacterized protein2.8e-1561.25Show/hide
Query:  RQEKSTKWICNLEKRIG-SGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT
        RQ KS KWI N  K +     +GGPS +PVGC  TAR  SA RA+R +  GGRT N SFG +PRA NSQLRTG DKGNPT
Subjt:  RQEKSTKWICNLEKRIG-SGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAATGTAGGCAAGAGAAGTCGACAAAATGGATCTGTAACCTCGAGAAAAGGATTGGCTCTGGGTGGGTCGGGGGTCCCAGTCCCAAACCTGTTGGTTGTCGGTG
GACAGCTCGAGTTACTTCTGCGACGAGAGCGAGTCGTCGCATGTCGGATGGAGGGCGGACTAGGAATGGCTCCTTCGGGAGCTATCCCCGGGCGCTGAACAGTCAACTCA
GAACTGGTATGGACAAAGGGAATCCGACTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAATGTAGGCAAGAGAAGTCGACAAAATGGATCTGTAACCTCGAGAAAAGGATTGGCTCTGGGTGGGTCGGGGGTCCCAGTCCCAAACCTGTTGGTTGTCGGTG
GACAGCTCGAGTTACTTCTGCGACGAGAGCGAGTCGTCGCATGTCGGATGGAGGGCGGACTAGGAATGGCTCCTTCGGGAGCTATCCCCGGGCGCTGAACAGTCAACTCA
GAACTGGTATGGACAAAGGGAATCCGACTACTTAA
Protein sequenceShow/hide protein sequence
MEQCRQEKSTKWICNLEKRIGSGWVGGPSPKPVGCRWTARVTSATRASRRMSDGGRTRNGSFGSYPRALNSQLRTGMDKGNPTT