| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG2717910.1 hypothetical protein I3760_03G196100 [Carya illinoinensis] | 3.0e-28 | 57.63 | Show/hide |
Query: LALASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEK
L SL +YLD+K+LV+L DGRIL+G +CSFD+ N+VL DA ER+IVG LYCD P+GL + RGEN++LIGE + ELPPHMT+VS+ EI A+KAE+
Subjt: LALASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEK
Query: ESSVLKRNLKKWMEEFLD
+++ LK ++K M EFLD
Subjt: ESSVLKRNLKKWMEEFLD
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| XP_010685283.1 PREDICTED: sm-like protein LSM1B isoform X1 [Beta vulgaris subsp. vulgaris] | 1.8e-28 | 60.53 | Show/hide |
Query: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
SL +YLDRK+LV+L DGR L+GT+CSFD+ N VL A ER+IVG LYCD P+GL + RGEN++LIGE DS +LPPHMT VS+ EI A+KAE+++S
Subjt: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
Query: LKRNLKKWMEEFLD
LK ++K M EFLD
Subjt: LKRNLKKWMEEFLD
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| XP_022955856.1 sm-like protein LSM1B [Cucurbita moschata] | 4.7e-37 | 65.22 | Show/hide |
Query: LGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSVL
+G+YLDRK+L++LLDGR +IGTMC+FD+HGN V+ A+ERI+ + YCDKPMGLL+ RG+N + IGE D PELPPH+T VSLP+IL A+KAE ESS L
Subjt: LGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSVL
Query: KRNLKKWMEEFLDDI
KR LKKWMEE LD +
Subjt: KRNLKKWMEEFLDDI
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| XP_022980750.1 sm-like protein LSM1B [Cucurbita maxima] | 5.2e-36 | 64.35 | Show/hide |
Query: LGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSVL
+G+YLDRK+L++LLDGR +IGTMC+FD++GN+V+ A+ERI + YCDKPMGLL+ RG+N I IGE D PELPPH+T VSLP+IL A+KAE +SSV
Subjt: LGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSVL
Query: KRNLKKWMEEFLDDI
KR LKKWMEE D I
Subjt: KRNLKKWMEEFLDDI
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| XP_023527037.1 sm-like protein LSM1B isoform X2 [Cucurbita pepo subsp. pepo] | 2.1e-37 | 66.09 | Show/hide |
Query: LGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSVL
+G+YLDRK+L++LLDGR +IGTMC+FD+HGN V+ A+ERI+ + YCDKPMGLL+ RG+N I IGE D PELPPH+T VSLP+IL A+KAE ESS L
Subjt: LGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSVL
Query: KRNLKKWMEEFLDDI
KR LKKWMEE LD +
Subjt: KRNLKKWMEEFLDDI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A022Q0J9 U6 snRNA-associated Sm-like protein LSm1 | 4.3e-28 | 59.65 | Show/hide |
Query: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
SL +YLD+K+LV+L DGR L+G + SFD+ N VL A ER+IVG LYCD P+GL + RGEN++LIGE D ELPPHMT VS EI A+KAE+E+S
Subjt: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
Query: LKRNLKKWMEEFLD
LK +KKWM +FLD
Subjt: LKRNLKKWMEEFLD
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| A0A2H5NE06 U6 snRNA-associated Sm-like protein LSm1 | 2.5e-28 | 59.65 | Show/hide |
Query: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
SL +YLD+K+LV+L DGR L+GT+CSFD+ N VL A ER+IVG LYCD P+GL + RGEN++LIGE D ELPPH+T+VS+ EI A+KAE+E+S
Subjt: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
Query: LKRNLKKWMEEFLD
LK +++K M EFLD
Subjt: LKRNLKKWMEEFLD
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| A0A6J1GV01 sm-like protein LSM1B | 2.3e-37 | 65.22 | Show/hide |
Query: LGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSVL
+G+YLDRK+L++LLDGR +IGTMC+FD+HGN V+ A+ERI+ + YCDKPMGLL+ RG+N + IGE D PELPPH+T VSLP+IL A+KAE ESS L
Subjt: LGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSVL
Query: KRNLKKWMEEFLDDI
KR LKKWMEE LD +
Subjt: KRNLKKWMEEFLDDI
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| A0A6J1IXE4 sm-like protein LSM1B | 2.5e-36 | 64.35 | Show/hide |
Query: LGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSVL
+G+YLDRK+L++LLDGR +IGTMC+FD++GN+V+ A+ERI + YCDKPMGLL+ RG+N I IGE D PELPPH+T VSLP+IL A+KAE +SSV
Subjt: LGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSVL
Query: KRNLKKWMEEFLDDI
KR LKKWMEE D I
Subjt: KRNLKKWMEEFLDDI
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| V4SS25 U6 snRNA-associated Sm-like protein LSm1 | 2.5e-28 | 59.65 | Show/hide |
Query: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
SL +YLD+K+LV+L DGR L+GT+CSFD+ N VL A ER+IVG LYCD P+GL + RGEN++LIGE D ELPPH+T+VS+ EI A+KAE+E+S
Subjt: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
Query: LKRNLKKWMEEFLD
LK +++K M EFLD
Subjt: LKRNLKKWMEEFLD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15116 U6 snRNA-associated Sm-like protein LSm1 | 5.8e-14 | 42.06 | Show/hide |
Query: ASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESS
ASL +D+K LV+L DGR LIG + S D+ N+VL ERI VG Y D P G+ + RGEN++L+GE D P + VS+ EIL ++ E+++
Subjt: ASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESS
Query: VLKRNLK
+ LK
Subjt: VLKRNLK
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| Q54W83 Probable U6 snRNA-associated Sm-like protein LSm1 | 2.0e-14 | 39.81 | Show/hide |
Query: ASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESS
+ LG +D+K++V+L DGR IG M +FD+ NIVL D ERI VG Y DK +GL RG+N++++GE D + +S EI A EK
Subjt: ASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESS
Query: VLKRNLKK
+ LK+
Subjt: VLKRNLKK
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| Q5E9Z8 U6 snRNA-associated Sm-like protein LSm1 | 5.8e-14 | 42.06 | Show/hide |
Query: ASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESS
ASL +D+K LV+L DGR LIG + S D+ N+VL ERI VG Y D P G+ + RGEN++L+GE D P + VS+ EIL ++ E+++
Subjt: ASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESS
Query: VLKRNLK
+ LK
Subjt: VLKRNLK
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| Q8LFL8 Sm-like protein LSM1B | 7.0e-28 | 57.02 | Show/hide |
Query: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
SL +YLDRK+LV+L DGR L+GT+ SFD+ N VL A ER+IVG YCD P+GL + RGEN++LIGE D+ ELPPHM VS EI A+K E+E+S
Subjt: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
Query: LKRNLKKWMEEFLD
L+ ++K M EFLD
Subjt: LKRNLKKWMEEFLD
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| Q945P8 Sm-like protein LSM1A | 2.4e-28 | 57.89 | Show/hide |
Query: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
SL AYLD+K+LV+L DGR L+G + SFD+ N VL +AYER+IVG LYCD P+GL + RGEN++LIGE D ELP HM V EI A+KAEKE +
Subjt: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
Query: LKRNLKKWMEEFLD
LK ++K M EFLD
Subjt: LKRNLKKWMEEFLD
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G19120.1 Small nuclear ribonucleoprotein family protein | 1.7e-29 | 57.89 | Show/hide |
Query: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
SL AYLD+K+LV+L DGR L+G + SFD+ N VL +AYER+IVG LYCD P+GL + RGEN++LIGE D ELP HM V EI A+KAEKE +
Subjt: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
Query: LKRNLKKWMEEFLD
LK ++K M EFLD
Subjt: LKRNLKKWMEEFLD
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| AT1G65700.1 Small nuclear ribonucleoprotein family protein | 5.9e-06 | 33.77 | Show/hide |
Query: ALASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERII-VGHLYCDKPMGLLLPRGENIILIGEPDSRL
A L +D+ + V+ DGR ++G + FD+ NI+L +++ER+ +GL + RG+NI +IGE D L
Subjt: ALASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERII-VGHLYCDKPMGLLLPRGENIILIGEPDSRL
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| AT1G65700.2 Small nuclear ribonucleoprotein family protein | 5.9e-06 | 33.77 | Show/hide |
Query: ALASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERII-VGHLYCDKPMGLLLPRGENIILIGEPDSRL
A L +D+ + V+ DGR ++G + FD+ NI+L +++ER+ +GL + RG+NI +IGE D L
Subjt: ALASLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERII-VGHLYCDKPMGLLLPRGENIILIGEPDSRL
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| AT3G14080.1 Small nuclear ribonucleoprotein family protein | 5.0e-29 | 57.02 | Show/hide |
Query: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
SL +YLDRK+LV+L DGR L+GT+ SFD+ N VL A ER+IVG YCD P+GL + RGEN++LIGE D+ ELPPHM VS EI A+K E+E+S
Subjt: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
Query: LKRNLKKWMEEFLD
L+ ++K M EFLD
Subjt: LKRNLKKWMEEFLD
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| AT3G14080.2 Small nuclear ribonucleoprotein family protein | 5.0e-29 | 57.02 | Show/hide |
Query: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
SL +YLDRK+LV+L DGR L+GT+ SFD+ N VL A ER+IVG YCD P+GL + RGEN++LIGE D+ ELPPHM VS EI A+K E+E+S
Subjt: SLGAYLDRKVLVMLLDGRILIGTMCSFDEHGNIVLSDAYERIIVGHLYCDKPMGLLLPRGENIILIGEPDSRLPELPPHMTNVSLPEILTAKKAEKESSV
Query: LKRNLKKWMEEFLD
L+ ++K M EFLD
Subjt: LKRNLKKWMEEFLD
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