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Tan0021167 (gene) of Snake gourd v1 genome

Gene IDTan0021167
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG08:58332001..58333527
RNA-Seq ExpressionTan0021167
SyntenyTan0021167
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OAY43379.2 hypothetical protein MANES_08G063666v8 [Manihot esculenta]5.1e-4156.96Show/hide
Query:  KATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSK-KNKWYLDSGCLRHMTGDQSKFVNLSKKDG-GLVTFGDNKKGKIIGKGSIGNSSST
        KATWD+S +S      +EIAN  FM      +E  DEVCLK SK ++KWYLDSGC RHMTG+ S F++L KKDG G VTFGDN KGKI+G G +G  +S 
Subjt:  KATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSK-KNKWYLDSGCLRHMTGDQSKFVNLSKKDG-GLVTFGDNKKGKIIGKGSIGNSSST

Query:  LIENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI
        +++ VLLVDGLK++LL++SQLCDK  RV+F+ K+C +   SD K+LFVG R EN+Y I
Subjt:  LIENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI

XP_022155914.1 uncharacterized protein LOC111022917 isoform X1 [Momordica charantia]2.5e-4864.33Show/hide
Query:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL
        MKATWD+SDE       EE+AN  FM   ++ D  +D+VCL+ S KNKWYLDSGC ++M GD +KF +L  KDGG VTFGDNK+GKIIGK +IGN S  +
Subjt:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL

Query:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI
        IENVLLVDGLK++LL+ISQLCDK ++VVF+ KNCIIENA D K+LFV N+D+NVYTI
Subjt:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI

XP_022155998.1 uncharacterized protein LOC111022973 [Momordica charantia]1.8e-7085.99Show/hide
Query:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL
        MKATWDDSDESG+ S+NE++ANF FM HSDK DEQDDEVCLK SKK+KWYLDSGC RHMTGDQSKFV  SKKDG  VTF DNKKGKIIGKGSIGN SS L
Subjt:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL

Query:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI
        IE+VLLVDGLK+DLL+ISQLCDK FRVVFDKKNCIIENASDRKVLFVGNRDENVYTI
Subjt:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]5.4e-5144.97Show/hide
Query:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDE--------------------------------------------------------------
        MKATWDDSDESG+ S+NEE+ANF FM HSDK DEQDDE                                                              
Subjt:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDE--------------------------------------------------------------

Query:  -------------------------------------------------------------------------------VCLKVSKKNKWYLDSGCLRHM
                                                                                       VCLK SKK+KWYLDS C RHM
Subjt:  -------------------------------------------------------------------------------VCLKVSKKNKWYLDSGCLRHM

Query:  TGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTLIENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI
        TGDQSKFV  SK DGG VTFGDNKKGKIIGKGSIGN SS LIE+VLLVDGLK+DLL+ISQL DK FRVVFDKKNCIIENAS RKVLFVGNRDENVYTI
Subjt:  TGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTLIENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI

XP_022950378.1 uncharacterized protein LOC111453493 [Cucurbita moschata]1.2e-5885.4Show/hide
Query:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL
        MKATWDDSDES +GSD EE+ANF FM HSDK DEQ+DEVCLK SKKNKWYLDSGC RHMTG+ SKFVNLSKKDGGLVTFGDNKKGKIIGKG+IGN S TL
Subjt:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL

Query:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIE
        IENVLLVDGL +DLL+ISQLCDK FRVVFDK NCIIE
Subjt:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIE

TrEMBL top hitse value%identityAlignment
A0A6J1DPE4 uncharacterized protein LOC1110229738.7e-7185.99Show/hide
Query:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL
        MKATWDDSDESG+ S+NE++ANF FM HSDK DEQDDEVCLK SKK+KWYLDSGC RHMTGDQSKFV  SKKDG  VTF DNKKGKIIGKGSIGN SS L
Subjt:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL

Query:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI
        IE+VLLVDGLK+DLL+ISQLCDK FRVVFDKKNCIIENASDRKVLFVGNRDENVYTI
Subjt:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI

A0A6J1DRR0 uncharacterized protein LOC111022917 isoform X11.2e-4864.33Show/hide
Query:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL
        MKATWD+SDE       EE+AN  FM   ++ D  +D+VCL+ S KNKWYLDSGC ++M GD +KF +L  KDGG VTFGDNK+GKIIGK +IGN S  +
Subjt:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL

Query:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI
        IENVLLVDGLK++LL+ISQLCDK ++VVF+ KNCIIENA D K+LFV N+D+NVYTI
Subjt:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI

A0A6J1DS74 uncharacterized protein LOC1110238062.6e-5144.97Show/hide
Query:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDE--------------------------------------------------------------
        MKATWDDSDESG+ S+NEE+ANF FM HSDK DEQDDE                                                              
Subjt:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDE--------------------------------------------------------------

Query:  -------------------------------------------------------------------------------VCLKVSKKNKWYLDSGCLRHM
                                                                                       VCLK SKK+KWYLDS C RHM
Subjt:  -------------------------------------------------------------------------------VCLKVSKKNKWYLDSGCLRHM

Query:  TGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTLIENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI
        TGDQSKFV  SK DGG VTFGDNKKGKIIGKGSIGN SS LIE+VLLVDGLK+DLL+ISQL DK FRVVFDKKNCIIENAS RKVLFVGNRDENVYTI
Subjt:  TGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTLIENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI

A0A6J1GER0 uncharacterized protein LOC1114534935.8e-5985.4Show/hide
Query:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL
        MKATWDDSDES +GSD EE+ANF FM HSDK DEQ+DEVCLK SKKNKWYLDSGC RHMTG+ SKFVNLSKKDGGLVTFGDNKKGKIIGKG+IGN S TL
Subjt:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL

Query:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIE
        IENVLLVDGL +DLL+ISQLCDK FRVVFDK NCIIE
Subjt:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIE

A5BY76 CCHC-type domain-containing protein7.2e-4155.41Show/hide
Query:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL
        M ATW +S+ES    + +E+AN  FM       ++ DEV ++ SK +KW+LDSGC RHMTGD+SKFV L+K+ GG VTFGDN KG+IIG+G+IGN +S+L
Subjt:  MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTL

Query:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI
        IE+VLLVDGLK++LL+ISQLCDK F+V+F+  +CII++  + K +F+  R +NVY I
Subjt:  IENVLLVDGLKYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTACTTGGGATGATAGTGATGAAAGTGGAACTGGAAGTGACAATGAAGAAATAGCAAACTTTTACTTCATGACTCATAGTGACAAGCGTGATGAACAAGATGA
TGAGGTATGTTTGAAAGTATCCAAGAAAAATAAATGGTACTTAGATAGTGGTTGCTTGAGGCATATGACGGGAGACCAATCCAAGTTTGTCAATCTTTCCAAAAAGGATG
GAGGTTTAGTAACTTTTGGTGACAACAAAAAAGGTAAAATTATTGGTAAGGGTAGTATAGGTAATAGTTCTTCTACTTTGATTGAAAATGTACTTTTAGTTGATGGTCTA
AAGTATGATTTACTTAATATTAGTCAATTATGTGATAAAAGTTTTAGAGTTGTGTTTGATAAAAAGAATTGCATCATTGAAAATGCTAGTGATAGAAAAGTCTTGTTTGT
TGGCAATAGGGATGAAAATGTGTATACTATTTGTTAA
mRNA sequenceShow/hide mRNA sequence
GAACAATAACTCTTTATTGAAATAATAACACTTTATTACAATAATTAGAATAAAATTACAAACTACGAGTTTTAGGGCACAAACCCCAACATGAAAGCTACTTGGGATGA
TAGTGATGAAAGTGGAACTGGAAGTGACAATGAAGAAATAGCAAACTTTTACTTCATGACTCATAGTGACAAGCGTGATGAACAAGATGATGAGGTATGTTTGAAAGTAT
CCAAGAAAAATAAATGGTACTTAGATAGTGGTTGCTTGAGGCATATGACGGGAGACCAATCCAAGTTTGTCAATCTTTCCAAAAAGGATGGAGGTTTAGTAACTTTTGGT
GACAACAAAAAAGGTAAAATTATTGGTAAGGGTAGTATAGGTAATAGTTCTTCTACTTTGATTGAAAATGTACTTTTAGTTGATGGTCTAAAGTATGATTTACTTAATAT
TAGTCAATTATGTGATAAAAGTTTTAGAGTTGTGTTTGATAAAAAGAATTGCATCATTGAAAATGCTAGTGATAGAAAAGTCTTGTTTGTTGGCAATAGGGATGAAAATG
TGTATACTATTTGTTAA
Protein sequenceShow/hide protein sequence
MKATWDDSDESGTGSDNEEIANFYFMTHSDKRDEQDDEVCLKVSKKNKWYLDSGCLRHMTGDQSKFVNLSKKDGGLVTFGDNKKGKIIGKGSIGNSSSTLIENVLLVDGL
KYDLLNISQLCDKSFRVVFDKKNCIIENASDRKVLFVGNRDENVYTIC