; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021171 (gene) of Snake gourd v1 genome

Gene IDTan0021171
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionKRR1 small subunit processome component
Genome locationLG02:848466..852054
RNA-Seq ExpressionTan0021171
SyntenyTan0021171
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR024166 - Ribosomal RNA assembly KRR1
IPR036612 - K Homology domain, type 1 superfamily
IPR041174 - Krr1, KH1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012057.1 mis3 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-18489.6Show/hide
Query:  IEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPY
        IEQQQ KTKHKGKHDKPKPWD+DPNID WKVEKFDPSWN+GGM+EVSSFSTLFP Y EKYL++ WP VKSALKEFG+AC+LNL+EGSMTVSTTRKT+DPY
Subjt:  IEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPY

Query:  IIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCIT
        IIVKARDLIKLL+RSVPA QAIKIL DEMQCDIIKIGNLV K+ERFVKRR+ LVGPN STLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+C+ 
Subjt:  IIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCIT

Query:  NKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAE
        NKMHPVYNIKILMMK+ELANDPALANENWDRFLPKFKKK VKQKKVKSK KKPYTPFPPPQP S+IDIQLETGEYFLSDKKKS KKWQEKQEKQAEKTAE
Subjt:  NKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAE

Query:  NKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS
        NKRKREAAFVPPKE  KQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+INPEAYIASSSDQ HFKKRSK SS
Subjt:  NKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS

XP_022148021.1 KRR1 small subunit processome component [Momordica charantia]1.1e-18590.11Show/hide
Query:  DIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDP
        D+EQQQ K KHKGKHDKPKPWD+DPNID WKV+KFDPSWN+GGM+EVSSFSTLFPEY EKYL+E WP VKSALKEF VACELNL+EGSMTVSTTRKTRDP
Subjt:  DIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDP

Query:  YIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCI
        YIIVKARDLIKLL+RSVPA QAIKIL DEMQCDIIKIGNLVGK++R VKRR+HLVGPN STLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC+
Subjt:  YIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCI

Query:  TNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTA
         NKMHPVYNIKILMMK+ELANDPALANENWDRFLPKFK+KTVKQKK KSK KKPYTPFPPPQ  SKIDIQLETGEYFLSDKKKS KKWQEKQEKQAEKTA
Subjt:  TNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTA

Query:  ENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKT
        ENKRKREAAFVPPKE  KQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETIN E+YIASSS+QPHFKK+SKT
Subjt:  ENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKT

XP_022952886.1 KRR1 small subunit processome component homolog [Cucurbita moschata]2.0e-18489.12Show/hide
Query:  DDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRD
        ++IEQQQ KTKHKGKHDKPKPWD+DPNID WKVEKFD SWN+GGM+EVSSFSTLFP Y EKYL++ WP VKSALKEFG+AC+LNL+EGSMTVSTTRKT+D
Subjt:  DDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRD

Query:  PYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC
        PYIIVKARDLIKLL+RSVPA QAIKIL DEMQCDIIKIGNLV K+ERFVKRR+ LVGPN STLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+C
Subjt:  PYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC

Query:  ITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKT
        + NKMHPVYNIKILMMK+ELANDPALANENWDRFLPKFKKKTVKQKKVKSK KKPYTPFPPPQP S+IDIQLETGEYFLSDKKKS KKWQEKQEKQAEKT
Subjt:  ITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKT

Query:  AENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS
        AENKRKREAAFVPPKE  KQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+INPEAYIASSSDQ HFKKRSK SS
Subjt:  AENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS

XP_022969421.1 KRR1 small subunit processome component homolog [Cucurbita maxima]8.9e-18589.12Show/hide
Query:  DDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRD
        ++IEQQQ KTKHKGKHDKPKPWD+DPNID WKVEKFDPSWN+GGM+EVSSFSTLFP Y EKYL++ WP VKSALKEFG+ACELNL+EGSMTVSTTRKT+D
Subjt:  DDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRD

Query:  PYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC
        PYIIVKARDLIKLL+RSVPA QAIKIL DEMQCDIIKIGNLV K+ERFVKRR+ LVGPN STLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+C
Subjt:  PYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC

Query:  ITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKT
        + NKMHPVYNIKILMMK+ELANDPALA+ENWDRFLPKFKKKTVKQKKVKSK KKPYTPFPPPQP S+IDIQLETGEYFLSDKKKS KKWQEKQEKQAEKT
Subjt:  ITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKT

Query:  AENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS
        AENKRKREA+FVPPKE  KQDTK DGDNNDIATMAKALKEKAKALGKRKAAE+INPEAYIA SSDQ HFKKRSK SS
Subjt:  AENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS

XP_023511730.1 KRR1 small subunit processome component homolog [Cucurbita pepo subsp. pepo]1.2e-18489.12Show/hide
Query:  DDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRD
        +++EQQQ KTKHKGKHDKPKPWD+DPNID W VEKFDPSWN+GGM+EVSSFSTLFP Y EKYL++ WP VKSALKEFG+ACELNL+EGSMTVSTTRKT+D
Subjt:  DDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRD

Query:  PYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC
        PYIIVKARDLIKLL+RSVPA QAIKIL DEMQCDIIKIGNLV K+ERFVKRR+ LVGPN STLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+C
Subjt:  PYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC

Query:  ITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKT
        + NKMHPVYNIKILMMK+ELANDPALANENWDRFLPKFKKKTVKQKKVKSK KKPYTPFPPPQP S+IDIQLETGEYFLSDKKKS KKWQEKQEKQAEKT
Subjt:  ITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKT

Query:  AENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS
        AENKRKREAAFVPPKE  KQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+INPEAYIASSSDQ HFKKRSK SS
Subjt:  AENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS

TrEMBL top hitse value%identityAlignment
A0A0A0K7G6 KRR1 small subunit processome component2.5e-18087.6Show/hide
Query:  MDDIEQQ-QKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKT
        M+DIEQQ Q KTKHKGKHDKPKPWD+DPNID WKVEKFDPSWN+ GM+EVSSFSTLFP Y EKYLR+ WP VKSALKEFG+  ELNLIEGSMTVSTTRKT
Subjt:  MDDIEQQ-QKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKT

Query:  RDPYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE
        RDPYIIVKARDLIKLL+RSVPA QAIKIL DEMQCDIIKIGNLV K+ERFVKRR+ LVGPN STLKALEILTGCYILVQGNTVAAMGSFKGLKQVRR+VE
Subjt:  RDPYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE

Query:  DCITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAE
        +C+ NKMHPVYNIKILMM++ELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKK YTPFPPPQ  S+IDIQLETGEYFL++KKKS KKWQ+KQEKQAE
Subjt:  DCITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAE

Query:  KTAENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS
        KTA+NKRKREAAFVPPKEA KQDTK DGD NDIA MAK+LKEKAKA GKRKAAETINPEAYIASSSD+P FKKRSKTSS
Subjt:  KTAENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS

A0A5D3CP78 KRR1 small subunit processome component2.2e-18188.39Show/hide
Query:  MDDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTR
        M+DIEQQQ KTKHKGKHDKPKPWD+DPNID WKVEKFDPSWN+ GM+EVSSFSTLFP Y EKYLR+ WP VKSALKEFG+  ELNLIEGSMTVSTTRKTR
Subjt:  MDDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTR

Query:  DPYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVED
        DPYIIVKARDLIKLL+RSVPA QAIKIL DEMQCDIIKIGNLV K+ERFVKRR+ LVGPN STLKALEILTGCYILVQGNTVAAMGSFKGLKQVRR+VE+
Subjt:  DPYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVED

Query:  CITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEK
        C+ NKMHPVYNIKILMMK+ELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKK YTPFPPPQ  S+IDIQLETGEYFL++KKKS KKWQ+KQEKQAEK
Subjt:  CITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEK

Query:  TAENKRKREAAFVPPKEAAK-QDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS
        TAENKRKREAAFVPPKEA K QDT+ DGD NDIA MAKALKEKAKA GKRKAAETINPEAYIASSSDQP FKKRSKTSS
Subjt:  TAENKRKREAAFVPPKEAAK-QDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS

A0A6J1D441 KRR1 small subunit processome component5.1e-18690.11Show/hide
Query:  DIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDP
        D+EQQQ K KHKGKHDKPKPWD+DPNID WKV+KFDPSWN+GGM+EVSSFSTLFPEY EKYL+E WP VKSALKEF VACELNL+EGSMTVSTTRKTRDP
Subjt:  DIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDP

Query:  YIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCI
        YIIVKARDLIKLL+RSVPA QAIKIL DEMQCDIIKIGNLVGK++R VKRR+HLVGPN STLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC+
Subjt:  YIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCI

Query:  TNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTA
         NKMHPVYNIKILMMK+ELANDPALANENWDRFLPKFK+KTVKQKK KSK KKPYTPFPPPQ  SKIDIQLETGEYFLSDKKKS KKWQEKQEKQAEKTA
Subjt:  TNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTA

Query:  ENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKT
        ENKRKREAAFVPPKE  KQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETIN E+YIASSS+QPHFKK+SKT
Subjt:  ENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKT

A0A6J1GLG6 KRR1 small subunit processome component9.6e-18589.12Show/hide
Query:  DDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRD
        ++IEQQQ KTKHKGKHDKPKPWD+DPNID WKVEKFD SWN+GGM+EVSSFSTLFP Y EKYL++ WP VKSALKEFG+AC+LNL+EGSMTVSTTRKT+D
Subjt:  DDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRD

Query:  PYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC
        PYIIVKARDLIKLL+RSVPA QAIKIL DEMQCDIIKIGNLV K+ERFVKRR+ LVGPN STLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+C
Subjt:  PYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC

Query:  ITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKT
        + NKMHPVYNIKILMMK+ELANDPALANENWDRFLPKFKKKTVKQKKVKSK KKPYTPFPPPQP S+IDIQLETGEYFLSDKKKS KKWQEKQEKQAEKT
Subjt:  ITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKT

Query:  AENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS
        AENKRKREAAFVPPKE  KQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+INPEAYIASSSDQ HFKKRSK SS
Subjt:  AENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS

A0A6J1HWB5 KRR1 small subunit processome component4.3e-18589.12Show/hide
Query:  DDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRD
        ++IEQQQ KTKHKGKHDKPKPWD+DPNID WKVEKFDPSWN+GGM+EVSSFSTLFP Y EKYL++ WP VKSALKEFG+ACELNL+EGSMTVSTTRKT+D
Subjt:  DDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRD

Query:  PYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC
        PYIIVKARDLIKLL+RSVPA QAIKIL DEMQCDIIKIGNLV K+ERFVKRR+ LVGPN STLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+C
Subjt:  PYIIVKARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC

Query:  ITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKT
        + NKMHPVYNIKILMMK+ELANDPALA+ENWDRFLPKFKKKTVKQKKVKSK KKPYTPFPPPQP S+IDIQLETGEYFLSDKKKS KKWQEKQEKQAEKT
Subjt:  ITNKMHPVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKT

Query:  AENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS
        AENKRKREA+FVPPKE  KQDTK DGDNNDIATMAKALKEKAKALGKRKAAE+INPEAYIA SSDQ HFKKRSK SS
Subjt:  AENKRKREAAFVPPKEAAKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS

SwissProt top hitse value%identityAlignment
B3LU25 KRR1 small subunit processome component2.8e-9660.71Show/hide
Query:  HDKPKPWDDDPNIDHWKVEKFDPSWNDGG--MVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID WK+E+F    N  G    E SSF TLFP+Y E YL+ +W DV  AL +  +AC L+L+EGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDDDPNIDHWKVEKFDPSWNDGG--MVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKI
        LARSVP  QA+KIL D+M CD+IKIGN V  +ERFVKRR+ LVGPNG+TLKALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC+ N +HP+Y+IK 
Subjt:  LARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKI

Query:  LMMKRELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAA
        LM+KRELA  P LANE+W RFLP FKK+ V   K KK+++  KK YTPFPP Q   K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Subjt:  LMMKRELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAA

Query:  FVPPKEAA
        F+ P+E A
Subjt:  FVPPKEAA

B5VEQ2 KRR1 small subunit processome component2.8e-9660.71Show/hide
Query:  HDKPKPWDDDPNIDHWKVEKFDPSWNDGG--MVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID WK+E+F    N  G    E SSF TLFP+Y E YL+ +W DV  AL +  +AC L+L+EGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDDDPNIDHWKVEKFDPSWNDGG--MVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKI
        LARSVP  QA+KIL D+M CD+IKIGN V  +ERFVKRR+ LVGPNG+TLKALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC+ N +HP+Y+IK 
Subjt:  LARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKI

Query:  LMMKRELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAA
        LM+KRELA  P LANE+W RFLP FKK+ V   K KK+++  KK YTPFPP Q   K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Subjt:  LMMKRELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAA

Query:  FVPPKEAA
        F+ P+E A
Subjt:  FVPPKEAA

C8Z430 KRR1 small subunit processome component2.8e-9660.71Show/hide
Query:  HDKPKPWDDDPNIDHWKVEKFDPSWNDGG--MVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID WK+E+F    N  G    E SSF TLFP+Y E YL+ +W DV  AL +  +AC L+L+EGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDDDPNIDHWKVEKFDPSWNDGG--MVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKI
        LARSVP  QA+KIL D+M CD+IKIGN V  +ERFVKRR+ LVGPNG+TLKALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC+ N +HP+Y+IK 
Subjt:  LARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKI

Query:  LMMKRELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAA
        LM+KRELA  P LANE+W RFLP FKK+ V   K KK+++  KK YTPFPP Q   K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Subjt:  LMMKRELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAA

Query:  FVPPKEAA
        F+ P+E A
Subjt:  FVPPKEAA

O74777 KRR1 small subunit processome component homolog3.2e-10061.24Show/hide
Query:  KHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLL
        ++ + KPWD D +IDHWK+E F    +    +E SSF+TLFP+Y EKYLREVWP V  AL +FG+ C L+L+EGSMTV TTRKT DPY I+ ARDLIKLL
Subjt:  KHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLL

Query:  ARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKIL
        ARSVP  QA+KI+ D + CDIIKIGN++  +ERFVKRR+ L+G NG TLKALE+LT CYILVQG TVA MG +KGLK+VRRIVEDC+ N +HP+Y+IK L
Subjt:  ARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKIL

Query:  MMKRELANDPALANENWDRFLPKFKKKTV-KQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAAFVP
        M+KRELA DP LANE+WDRFLP+FKK+ V ++K  K +  K YTPFPP QP SK+D+++E+GEYFL  ++K  KK  EK+E+Q EK  E +++R  AF+P
Subjt:  MMKRELANDPALANENWDRFLPKFKKKTV-KQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAAFVP

Query:  PKEAAKQ
        P+E++K+
Subjt:  PKEAAKQ

P25586 KRR1 small subunit processome component2.8e-9660.71Show/hide
Query:  HDKPKPWDDDPNIDHWKVEKFDPSWNDGG--MVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID WK+E+F    N  G    E SSF TLFP+Y E YL+ +W DV  AL +  +AC L+L+EGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDDDPNIDHWKVEKFDPSWNDGG--MVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKI
        LARSVP  QA+KIL D+M CD+IKIGN V  +ERFVKRR+ LVGPNG+TLKALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDC+ N +HP+Y+IK 
Subjt:  LARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKI

Query:  LMMKRELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAA
        LM+KRELA  P LANE+W RFLP FKK+ V   K KK+++  KK YTPFPP Q   K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Subjt:  LMMKRELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAA

Query:  FVPPKEAA
        F+ P+E A
Subjt:  FVPPKEAA

Arabidopsis top hitse value%identityAlignment
AT5G08420.1 RNA-binding KH domain-containing protein3.2e-14872.65Show/hide
Query:  QKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVK
        +K+ K KGKH+KPKPWDDDPNID W +EKFDP+WN  GM E S+FSTLFP+Y EKYL+E WP V+SALKE+GVAC+LNL+EGSMTVSTTRKTRDPYIIVK
Subjt:  QKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVK

Query:  ARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMH
        ARDLIKLL+RSVPA QAIKIL DE+QCDIIKIGNLV  +ERFVKRR+ LVGPN STLKALEILT CYILVQG+TVAAMG FKGLKQ+RRIVEDC+ N MH
Subjt:  ARDLIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMH

Query:  PVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRK
        PVY+IK LMMK+EL  DPALANE+WDRFLP F+KK VKQKK KSK KKPYTPFPPPQP SKID+QLE+GEYF+SDKKKSEKKWQEKQEKQ+EK+ ENKRK
Subjt:  PVYNIKILMMKRELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRK

Query:  REAAFVPPKEAAKQDT---KSDGDNNDIATMAKALKEKAKALGK-RKAAETINPEAYIAS-SSDQPHFKKRSK
        R+A+F+PP+E    ++   KS+   NDI  +  +LK K K L K +K  E +N E YIA  SS      K+SK
Subjt:  REAAFVPPKEAAKQDT---KSDGDNNDIATMAKALKEKAKALGK-RKAAETINPEAYIAS-SSDQPHFKKRSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACATCGAGCAACAGCAAAAGAAAACCAAACATAAGGGCAAGCATGACAAGCCGAAGCCATGGGATGACGATCCTAACATTGACCACTGGAAAGTTGAGAAATT
TGATCCCTCTTGGAATGATGGCGGCATGGTCGAAGTTAGCTCTTTCTCTACTTTGTTTCCCGAGTACGTAGAAAAATACTTGCGAGAAGTATGGCCGGATGTGAAGTCCG
CATTGAAAGAGTTTGGTGTTGCTTGTGAACTGAATTTGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCCTATATTATTGTAAAGGCAAGGGAT
CTTATCAAGCTTTTGGCAAGAAGTGTTCCTGCTTCTCAGGCGATAAAAATACTGGGCGATGAAATGCAATGTGATATCATTAAGATTGGGAACTTGGTAGGCAAGAGGGA
ACGATTTGTTAAAAGAAGGAAGCATCTTGTGGGCCCTAATGGATCAACTTTAAAGGCACTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTG
CAATGGGTTCATTCAAAGGTTTAAAGCAAGTTAGGAGGATAGTGGAAGACTGTATAACGAATAAAATGCATCCTGTTTATAATATTAAGATTCTCATGATGAAGAGAGAG
CTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATAGATTTCTTCCAAAATTCAAGAAGAAAACGGTTAAACAAAAGAAGGTCAAGAGTAAACCTAAGAAGCCGTA
TACACCTTTCCCTCCTCCTCAGCCACTAAGCAAGATTGATATACAATTGGAAACTGGAGAATACTTTTTAAGTGACAAAAAGAAGTCAGAAAAGAAATGGCAGGAGAAGC
AGGAGAAGCAGGCAGAAAAAACGGCTGAAAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCCAAGGAGGCTGCAAAGCAGGATACGAAATCTGATGGAGATAACAAT
GATATAGCCACAATGGCAAAGGCCCTGAAGGAAAAGGCCAAGGCATTGGGGAAGCGAAAAGCTGCAGAAACTATCAATCCTGAAGCTTATATCGCATCGTCCAGCGATCA
GCCTCATTTCAAAAAGAGATCCAAGACTTCATCGTAG
mRNA sequenceShow/hide mRNA sequence
CCCATTTATTGTCTTCTTCTCAGCAACGGCAGAGTCGCAGACGCTTCGACGCACGGCTTTTCTTCTTCTCAGTAACTGACCGGCAAACACACTTTCGTTTTTCTTCTCAC
GGCTTCAGACGCTTCGCTTCAGATCTACTTCAGCAGAAATCGATCAAATCTTCTTCCCCTTTGTAGCCATTTTAGTCCTCTTTGTTTTAGTGTAGGTTTTTTTAAGTTAT
TTAATTGGGTTTGTAAGCTCTCCTTTTCCCCCACATCTTCCGGACTCCTAGACGGTGATGGATGACATCGAGCAACAGCAAAAGAAAACCAAACATAAGGGCAAGCATGA
CAAGCCGAAGCCATGGGATGACGATCCTAACATTGACCACTGGAAAGTTGAGAAATTTGATCCCTCTTGGAATGATGGCGGCATGGTCGAAGTTAGCTCTTTCTCTACTT
TGTTTCCCGAGTACGTAGAAAAATACTTGCGAGAAGTATGGCCGGATGTGAAGTCCGCATTGAAAGAGTTTGGTGTTGCTTGTGAACTGAATTTGATTGAAGGATCAATG
ACAGTTTCAACAACTAGAAAGACTAGGGATCCCTATATTATTGTAAAGGCAAGGGATCTTATCAAGCTTTTGGCAAGAAGTGTTCCTGCTTCTCAGGCGATAAAAATACT
GGGCGATGAAATGCAATGTGATATCATTAAGATTGGGAACTTGGTAGGCAAGAGGGAACGATTTGTTAAAAGAAGGAAGCATCTTGTGGGCCCTAATGGATCAACTTTAA
AGGCACTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCAATGGGTTCATTCAAAGGTTTAAAGCAAGTTAGGAGGATAGTGGAAGACTGT
ATAACGAATAAAATGCATCCTGTTTATAATATTAAGATTCTCATGATGAAGAGAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATAGATTTCTTCCAAA
ATTCAAGAAGAAAACGGTTAAACAAAAGAAGGTCAAGAGTAAACCTAAGAAGCCGTATACACCTTTCCCTCCTCCTCAGCCACTAAGCAAGATTGATATACAATTGGAAA
CTGGAGAATACTTTTTAAGTGACAAAAAGAAGTCAGAAAAGAAATGGCAGGAGAAGCAGGAGAAGCAGGCAGAAAAAACGGCTGAAAACAAGAGAAAAAGAGAAGCTGCC
TTTGTTCCTCCCAAGGAGGCTGCAAAGCAGGATACGAAATCTGATGGAGATAACAATGATATAGCCACAATGGCAAAGGCCCTGAAGGAAAAGGCCAAGGCATTGGGGAA
GCGAAAAGCTGCAGAAACTATCAATCCTGAAGCTTATATCGCATCGTCCAGCGATCAGCCTCATTTCAAAAAGAGATCCAAGACTTCATCGTAGA
Protein sequenceShow/hide protein sequence
MDDIEQQQKKTKHKGKHDKPKPWDDDPNIDHWKVEKFDPSWNDGGMVEVSSFSTLFPEYVEKYLREVWPDVKSALKEFGVACELNLIEGSMTVSTTRKTRDPYIIVKARD
LIKLLARSVPASQAIKILGDEMQCDIIKIGNLVGKRERFVKRRKHLVGPNGSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCITNKMHPVYNIKILMMKRE
LANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKPYTPFPPPQPLSKIDIQLETGEYFLSDKKKSEKKWQEKQEKQAEKTAENKRKREAAFVPPKEAAKQDTKSDGDNN
DIATMAKALKEKAKALGKRKAAETINPEAYIASSSDQPHFKKRSKTSS