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Tan0021187 (gene) of Snake gourd v1 genome

Gene IDTan0021187
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG08:45589321..45590747
RNA-Seq ExpressionTan0021187
SyntenyTan0021187
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]1.0e-2254.95Show/hide
Query:  MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRET
        + H  Q+ +  ++L+ ++ P I   T +  T ASGSRS SR  SR   +R RGHSR +EL+++VN+HGRI IEIDE+VGKPVC  AT FS AIGTI R T
Subjt:  MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRET

Query:  IPLHYKTWSDV
        IPL  K WSDV
Subjt:  IPLHYKTWSDV

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]1.0e-2254.95Show/hide
Query:  MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRET
        + H  Q+ +  ++L+ ++ P I   T +  T ASGSRS SR  SR   +R RGHSR +EL+++VN+HGRI IEIDE+VGKPVC  AT FS AIGTI R T
Subjt:  MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRET

Query:  IPLHYKTWSDV
        IPL  K WSDV
Subjt:  IPLHYKTWSDV

XP_038887411.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]1.0e-2254.95Show/hide
Query:  MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRET
        + H  Q+ +  ++L+ ++ P I   T +  T ASGSRS SR  SR   +R RGHSR +EL+++VN+HGRI IEIDE+VGKPVC  AT FS AIGTI R T
Subjt:  MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRET

Query:  IPLHYKTWSDV
        IPL  K WSDV
Subjt:  IPLHYKTWSDV

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]1.0e-2254.95Show/hide
Query:  MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRET
        + H  Q+ +  ++L+ ++ P I   T +  T ASGSRS SR  SR   +R RGHSR +EL+++VN+HGRI IEIDE+VGKPVC  AT FS AIGTI R T
Subjt:  MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRET

Query:  IPLHYKTWSDV
        IPL  K WSDV
Subjt:  IPLHYKTWSDV

XP_038887414.1 poly [ADP-ribose] polymerase 1-like isoform X6 [Benincasa hispida]1.0e-2254.95Show/hide
Query:  MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRET
        + H  Q+ +  ++L+ ++ P I   T +  T ASGSRS SR  SR   +R RGHSR +EL+++VN+HGRI IEIDE+VGKPVC  AT FS AIGTI R T
Subjt:  MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRET

Query:  IPLHYKTWSDV
        IPL  K WSDV
Subjt:  IPLHYKTWSDV

TrEMBL top hitse value%identityAlignment
A0A5A7SMM8 CACTA en-spm transposon protein5.0e-0741.84Show/hide
Query:  LEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSDV
        L +E   K N LT    T+   S    +    W       HSR I ++ YV  H +I I I EKVGK V   AT FS AIGT TR+TI +H   W DV
Subjt:  LEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSDV

A0A5A7T9T1 Uncharacterized protein2.6e-0840.4Show/hide
Query:  LEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSDVP
        +E+ N P I+  T           S S++ ++ RG+  RG+ R IEL+++V  HG+I IEI+E+ GKPV T A   +  IGT  R TIPL  + W  VP
Subjt:  LEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSDVP

A0A5A7TFG0 Transposon protein, putative, CACTA, En/Spm sub-class4.5e-0839.39Show/hide
Query:  LEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSDVP
        +E+ N P ++  T           S S++ ++ RG+  RG+ R IEL+++V  HG+I IEI+E+ GKPV T A   +  IGT  R TIPL  + W  VP
Subjt:  LEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSDVP

A0A5A7US78 Uncharacterized protein7.7e-0839.39Show/hide
Query:  LEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSDVP
        +E+ N P I+  T           S S++ ++ RG+  RG+ R IEL+++V  HG+I IEI+E+ GKPV T     +  IGT  R TIPL  + W  VP
Subjt:  LEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSDVP

A0A5D3E0V3 Uncharacterized protein1.7e-0733.09Show/hide
Query:  LEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSDVPN
        +E+ N P I+  T           S S++ ++ RG+  RG+ R IEL+++V  HG+I IEI+E+ GKPV T     +  IGT  R TIPL  + W  VP 
Subjt:  LEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSDVPN

Query:  SSSSVTSSSQHEKELEKKVEQMQVEIGTLTSKLSSLEER
            +      +K    K  +  V+   +T   S L+ R
Subjt:  SSSSVTSSSQHEKELEKKVEQMQVEIGTLTSKLSSLEER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCATCCAAGTCAAGATCATGATGTAGTTGTTGTGTTAGAAGAGGAGAATGCTCCGAAGATTAATCGTTTGACAGCGCAACGCCGTACACGAGCTTCTGGATCTAG
ATCACGTTCTAGAGTAGCCTCTAGATGGCGAGGCAAGAGGGCGAGAGGGCATAGCCGAAGGATTGAGTTAGAGCAATATGTCAATGTACATGGTAGAATACCCATCGAGA
TCGATGAGAAGGTCGGAAAACCAGTGTGTACTAAGGCCACTACGTTCAGTGGAGCCATTGGTACCATCACCCGAGAAACAATTCCACTGCATTATAAAACGTGGAGCGAC
GTCCCAAATTCGTCGTCTAGCGTCACATCTTCTTCCCAACATGAAAAGGAGCTTGAAAAGAAGGTGGAGCAGATGCAAGTTGAGATTGGTACCTTAACGTCAAAGTTATC
CTCATTGGAAGAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCATCCAAGTCAAGATCATGATGTAGTTGTTGTGTTAGAAGAGGAGAATGCTCCGAAGATTAATCGTTTGACAGCGCAACGCCGTACACGAGCTTCTGGATCTAG
ATCACGTTCTAGAGTAGCCTCTAGATGGCGAGGCAAGAGGGCGAGAGGGCATAGCCGAAGGATTGAGTTAGAGCAATATGTCAATGTACATGGTAGAATACCCATCGAGA
TCGATGAGAAGGTCGGAAAACCAGTGTGTACTAAGGCCACTACGTTCAGTGGAGCCATTGGTACCATCACCCGAGAAACAATTCCACTGCATTATAAAACGTGGAGCGAC
GTCCCAAATTCGTCGTCTAGCGTCACATCTTCTTCCCAACATGAAAAGGAGCTTGAAAAGAAGGTGGAGCAGATGCAAGTTGAGATTGGTACCTTAACGTCAAAGTTATC
CTCATTGGAAGAAAGATGA
Protein sequenceShow/hide protein sequence
MVHPSQDHDVVVVLEEENAPKINRLTAQRRTRASGSRSRSRVASRWRGKRARGHSRRIELEQYVNVHGRIPIEIDEKVGKPVCTKATTFSGAIGTITRETIPLHYKTWSD
VPNSSSSVTSSSQHEKELEKKVEQMQVEIGTLTSKLSSLEER