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Tan0021198 (gene) of Snake gourd v1 genome

Gene IDTan0021198
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:36729012..36729688
RNA-Seq ExpressionTan0021198
SyntenyTan0021198
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571236.1 hypothetical protein SDJN03_30151, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1461.29Show/hide
Query:  HLCLLSLLLLPLLLPATSNFLVHSRALRVDAAAEIGQRDGSDAGDLKLKLKAGGGGGD-----GSDMSNKRELLDERVFTLASGPSRRGDGHK
        HLCLLSLLLLPLLLPATS  L+H RAL+ +          SDA + KLK K GGGGG+     G DMSN      +RVFTLASGPSRRGDGHK
Subjt:  HLCLLSLLLLPLLLPATSNFLVHSRALRVDAAAEIGQRDGSDAGDLKLKLKAGGGGGD-----GSDMSNKRELLDERVFTLASGPSRRGDGHK
KGN63303.1 hypothetical protein Csa_022628 [Cucumis sativus]5.5e-1666.32Show/hide
Query:  MRHLCLLSLLLLPLLLP-ATSNFLVHSRALRVDAAAEIGQRDGSDAGDLKLKLKAGGGGGD----GSDMSNKRELLDERVFTLASGPSRRGDGHK
        MRHLCLLSLLLLPLLLP  TSN LVH RAL+ DA  EI    GS A + KLK K   GGGD    GSD SN      +RVFTLASGPSRRGDGHK
Subjt:  MRHLCLLSLLLLPLLLP-ATSNFLVHSRALRVDAAAEIGQRDGSDAGDLKLKLKAGGGGGD----GSDMSNKRELLDERVFTLASGPSRRGDGHK
TrEMBL top hitse value%identityAlignment
A0A0A0LNA9 Uncharacterized protein2.7e-1666.32Show/hide
Query:  MRHLCLLSLLLLPLLLP-ATSNFLVHSRALRVDAAAEIGQRDGSDAGDLKLKLKAGGGGGD----GSDMSNKRELLDERVFTLASGPSRRGDGHK
        MRHLCLLSLLLLPLLLP  TSN LVH RAL+ DA  EI    GS A + KLK K   GGGD    GSD SN      +RVFTLASGPSRRGDGHK
Subjt:  MRHLCLLSLLLLPLLLP-ATSNFLVHSRALRVDAAAEIGQRDGSDAGDLKLKLKAGGGGGD----GSDMSNKRELLDERVFTLASGPSRRGDGHK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCATCTTTGCCTGCTCTCTCTGCTTCTCCTGCCCTTGCTTCTTCCCGCGACCTCTAATTTTCTAGTCCACAGTAGAGCGCTCCGAGTCGATGCTGCGGCCGAGAT
CGGGCAGCGGGATGGCTCTGATGCCGGTGACTTGAAATTGAAACTGAAGGCTGGTGGTGGTGGCGGCGATGGTTCCGACATGTCGAATAAGAGGGAGTTGTTGGATGAGC
GGGTGTTCACGTTGGCGTCCGGACCCAGCAGGAGGGGAGATGGGCACAAGTGA
mRNA sequenceShow/hide mRNA sequence
CTCCAACCCCCCCTTTTCCTCTTCGTTCTCCCAGTAGCTCAATTTGAGATGCCGTTTCTAGATACTATCTTTTCTGCTCCATTCTTTTTGTTCTCACAGAATCTTGTAAT
CTTTTTTCAATAACACACTTAAAAACATTTAGAGACAAACCCCACCACAACAACAACAACATCAACTACAACACCACCACCAACAAAAGTATGAGGCATCTTTGCCTGCT
CTCTCTGCTTCTCCTGCCCTTGCTTCTTCCCGCGACCTCTAATTTTCTAGTCCACAGTAGAGCGCTCCGAGTCGATGCTGCGGCCGAGATCGGGCAGCGGGATGGCTCTG
ATGCCGGTGACTTGAAATTGAAACTGAAGGCTGGTGGTGGTGGCGGCGATGGTTCCGACATGTCGAATAAGAGGGAGTTGTTGGATGAGCGGGTGTTCACGTTGGCGTCC
GGACCCAGCAGGAGGGGAGATGGGCACAAGTGAAGTTGGGAAAAGTGTCGACTGGTTGAATTTCTTTTGTTGTTGGCTTCATTTGGTTGGTCTCTTTTAATTATTACTCT
GCGGTTTTAATCTGTAAGAAAGAGTTCTCTTTTCACAGATTGTACAAAAATTATTTTCACAGATTATAAGTTACTGTTCTAATGTTGTGTTACTATGTCATCGTGGGTTG
AGTTTGTGATTTGCAGC
Protein sequenceShow/hide protein sequence
MRHLCLLSLLLLPLLLPATSNFLVHSRALRVDAAAEIGQRDGSDAGDLKLKLKAGGGGGDGSDMSNKRELLDERVFTLASGPSRRGDGHK