; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021212 (gene) of Snake gourd v1 genome

Gene IDTan0021212
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein CLAVATA 3
Genome locationLG05:60854533..60855274
RNA-Seq ExpressionTan0021212
SyntenyTan0021212
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsIPR039818 - CLAVATA3
IPR044962 - CLV3/ESR signal peptide family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD48378.1 TPA_asm: hypothetical protein HUJ06_018315 [Nelumbo nucifera]2.7e-0651.35Show/hide
Query:  CSRRLGRPH--CISASSQTRKMLREMRKEME--EEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP
        C  R G  H    S  +Q+RK+L    +  +    +D R+R    V WD LRRVPSGPDPLHHNGGSPKKP+TP
Subjt:  CSRRLGRPH--CISASSQTRKMLREMRKEME--EEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP

KAA0054350.1 protein CLAVATA 3 [Cucumis melo var. makuwa]1.9e-1275.93Show/hide
Query:  TRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP
        +RKM+ EM+KEMEE   G KR R   EW+QLRRVPSGPDPLHHNGGSPKKPRTP
Subjt:  TRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP

KAE8652825.1 hypothetical protein Csa_022700, partial [Cucumis sativus]5.2e-1860.19Show/hide
Query:  STFALLSLLLLFFFLSHNLSS---DYCSRRLGRPHCIS-------ASSQTRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKP
        S  + LSLLLLFFFL+H L S   +YC  R+GR   +S       A   +RKML EM+KEMEE   G KR     EW+QLRRVPSGPDPLHHNGGSPKKP
Subjt:  STFALLSLLLLFFFLSHNLSS---DYCSRRLGRPHCIS-------ASSQTRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKP

Query:  RTP
        RTP
Subjt:  RTP

KAG6583691.1 hypothetical protein SDJN03_19623, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2069.57Show/hide
Query:  LLSLLLLFFFLSHNLSS-DYCSRRLGRPHC--ISASSQTRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP
        + SLLLL FFLSHN SS    +RR   P    +  + QTRKMLREM KE+  EVDG +RRRP+VEWDQLRRVPSGPDPLHHNGGSPKKPRTP
Subjt:  LLSLLLLFFFLSHNLSS-DYCSRRLGRPHC--ISASSQTRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP

XP_038877536.1 protein CLAVATA 3 [Benincasa hispida]2.9e-2162.5Show/hide
Query:  PSNSKFMFNSTFALLSLLLLFFFLSHNLSSD-YCSRRLGRPHCISASSQ---------TRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLH
        PS+SKF+  S+FA  SLLLL FFL    SSD YC  R+ R  C   S +         +RKML+EM+KEMEE VDG KR  PA EW+QLRRVPSGPDPLH
Subjt:  PSNSKFMFNSTFALLSLLLLFFFLSHNLSSD-YCSRRLGRPHCISASSQ---------TRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLH

Query:  HNGGSPKKPRTP
        HNGGSPKKPRTP
Subjt:  HNGGSPKKPRTP

TrEMBL top hitse value%identityAlignment
A0A1U8Q0C1 uncharacterized protein LOC1091143291.3e-0651.35Show/hide
Query:  CSRRLGRPH--CISASSQTRKMLREMRKEME--EEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP
        C  R G  H    S  +Q+RK+L    +  +    +D R+R    V WD LRRVPSGPDPLHHNGGSPKKP+TP
Subjt:  CSRRLGRPH--CISASSQTRKMLREMRKEME--EEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP

A0A5A7UGG1 Protein CLAVATA 39.3e-1375.93Show/hide
Query:  TRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP
        +RKM+ EM+KEMEE   G KR R   EW+QLRRVPSGPDPLHHNGGSPKKPRTP
Subjt:  TRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP

A0A5D2TI27 Uncharacterized protein5.4e-0558.18Show/hide
Query:  SQTRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRT
        +Q RK+L    KE    + G       V WD LR VPSGPDPLHHNGGSPKKPRT
Subjt:  SQTRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRT

A0A7D5DMW3 Clavata3-like protein9.3e-0536.36Show/hide
Query:  SKFMFNSTFALLSLLLLFFFLSHNLSSDYCSRRLGRPHCISASSQTRKM--------LREMRKEMEEEVDG---RKRRRPAVEWDQLRRVPSGPDPLHHN
        SKF+F+S   L+ L LL    + + SS Y         C+ A+S  +++        L++ +  ++  + G    K    ++ W +LR+VPSGPDPLHHN
Subjt:  SKFMFNSTFALLSLLLLFFFLSHNLSSDYCSRRLGRPHCISASSQTRKM--------LREMRKEMEEEVDG---RKRRRPAVEWDQLRRVPSGPDPLHHN

Query:  GGSPKKPRTP
        GG+PKKP TP
Subjt:  GGSPKKPRTP

A0A7J8WB42 Uncharacterized protein2.4e-0558.18Show/hide
Query:  SQTRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRT
        +Q RK+L    KE    + G       VEW +LR VPSGPDPLHHNGGSPKKPRT
Subjt:  SQTRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCCTCTAACTCTAAATTCATGTTTAATTCCACCTTTGCCCTCCTTTCCCTTCTCCTTCTCTTTTTCTTCCTCTCTCACAATCTTTCTTCTGATTATTGCAGCCG
GAGACTTGGACGACCCCATTGCATTTCCGCCTCGTCTCAGACTCGTAAGATGCTTCGTGAGATGAGAAAGGAGATGGAAGAGGAAGTTGACGGCCGTAAGAGACGGCGGC
CGGCGGTGGAGTGGGACCAGTTGCGGAGGGTGCCGTCGGGACCTGACCCATTACACCATAATGGTGGAAGCCCTAAAAAGCCTAGAACTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCCTCTAACTCTAAATTCATGTTTAATTCCACCTTTGCCCTCCTTTCCCTTCTCCTTCTCTTTTTCTTCCTCTCTCACAATCTTTCTTCTGATTATTGCAGCCG
GAGACTTGGACGACCCCATTGCATTTCCGCCTCGTCTCAGACTCGTAAGATGCTTCGTGAGATGAGAAAGGAGATGGAAGAGGAAGTTGACGGCCGTAAGAGACGGCGGC
CGGCGGTGGAGTGGGACCAGTTGCGGAGGGTGCCGTCGGGACCTGACCCATTACACCATAATGGTGGAAGCCCTAAAAAGCCTAGAACTCCTTGA
Protein sequenceShow/hide protein sequence
MPPSNSKFMFNSTFALLSLLLLFFFLSHNLSSDYCSRRLGRPHCISASSQTRKMLREMRKEMEEEVDGRKRRRPAVEWDQLRRVPSGPDPLHHNGGSPKKPRTP