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Tan0021216 (gene) of Snake gourd v1 genome

Gene IDTan0021216
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH-ubiquinone reductase complex 1 MLRQ subunit
Genome locationLG02:91021626..91022153
RNA-Seq ExpressionTan0021216
SyntenyTan0021216
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142944.1 uncharacterized protein LOC101222643 [Cucumis sativus]4.4e-4294.38Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA+VGVAVGIC MQL+RNITTNPEVRVIKE+RAAG+LDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
XP_016900034.1 PREDICTED: uncharacterized protein LOC107990723 [Cucumis melo]9.9e-4294.38Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA+VGVAVGIC MQL+RNITTNPEVRVIKE+RAAG+LDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
XP_022961943.1 uncharacterized protein LOC111462563 [Cucurbita moschata]4.4e-4294.38Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA VGVAVGICGMQL+RNITTNPEVRV KE+RAAG+LDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
XP_023545968.1 uncharacterized protein LOC111805233 [Cucurbita pepo subsp. pepo]9.9e-4293.26Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA VGVAVGICGMQL+RNITTNPEVRV K++RAAG+LDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
XP_038885463.1 uncharacterized protein LOC120075838 [Benincasa hispida]3.4e-4294.38Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MA+ANRWLKPEVYPLFAAVGVAVGICGMQL+RNITTNPEVRVIKEKR AG+LDN+EEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
TrEMBL top hitse value%identityAlignment
A0A0A0LMX7 Uncharacterized protein2.1e-4294.38Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA+VGVAVGIC MQL+RNITTNPEVRVIKE+RAAG+LDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
A0A1S4DVM4 uncharacterized protein LOC1079907234.8e-4294.38Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA+VGVAVGIC MQL+RNITTNPEVRVIKE+RAAG+LDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
A0A6J1BUB6 uncharacterized protein LOC1110048298.1e-4294.38Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MA  NRWLKPEVYPLFAAVGVAVGICGMQL+RNITTNPEVRVIKEKRAAG+LDNFEEGEKYAEHGLRKFLRTR PQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
A0A6J1HDB5 uncharacterized protein LOC1114625632.1e-4294.38Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MATANRWLKPEVYPLFA VGVAVGICGMQL+RNITTNPEVRV KE+RAAG+LDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
A0A6P4AFV5 uncharacterized protein LOC1074283744.9e-3987.64Show/hide
Query:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
        MAT NRWL+PEVYPLFA+VGVAVGICGMQL+RNITTNPEVRV KE RAAG+LDN +EGEKYAEHGLRKFLR RPPQIMPSIN FFSDPN
Subjt:  MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein2.2e-2356.79Show/hide
Query:  RWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFS
        RW++PEVYPL  A+G    +   QL RN   NP+ R+ KE R  GIL+N +EGEKYA+H  RK+LRTR PQ+MPS+N+FFS
Subjt:  RWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFS
AT3G48140.1 B12D protein4.4e-3272.94Show/hide
Query:  ANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDP
        A+RWL+PEVYPLFAA GVAVGIC   LIRNIT NPEVR  KE RAAGILDN  EGEKY E+ LRKF+R + P+IMP +NKFF+DP
Subjt:  ANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCCAACAGATGGTTAAAGCCTGAGGTGTATCCTCTCTTTGCTGCAGTTGGTGTGGCTGTTGGCATCTGTGGGATGCAGCTTATTAGAAACATTACAACCAA
CCCTGAAGTCAGAGTTATCAAAGAGAAGAGAGCTGCAGGAATTCTTGACAACTTTGAAGAAGGTGAGAAGTATGCAGAGCATGGCCTTAGGAAGTTCCTCAGAACAAGAC
CCCCTCAGATTATGCCTTCCATCAACAAATTCTTCTCAGATCCAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCGCCAACAGATGGTTAAAGCCTGAGGTGTATCCTCTCTTTGCTGCAGTTGGTGTGGCTGTTGGCATCTGTGGGATGCAGCTTATTAGAAACATTACAACCAA
CCCTGAAGTCAGAGTTATCAAAGAGAAGAGAGCTGCAGGAATTCTTGACAACTTTGAAGAAGGTGAGAAGTATGCAGAGCATGGCCTTAGGAAGTTCCTCAGAACAAGAC
CCCCTCAGATTATGCCTTCCATCAACAAATTCTTCTCAGATCCAAACTAA
Protein sequenceShow/hide protein sequence
MATANRWLKPEVYPLFAAVGVAVGICGMQLIRNITTNPEVRVIKEKRAAGILDNFEEGEKYAEHGLRKFLRTRPPQIMPSINKFFSDPN