; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021240 (gene) of Snake gourd v1 genome

Gene IDTan0021240
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG07:57730949..57732049
RNA-Seq ExpressionTan0021240
SyntenyTan0021240
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4102584.1 unnamed protein product [Lactuca saligna]3.4e-1734.59Show/hide
Query:  EEVESSYGSYLNLHTPHGSDDEE--DVNGPEFM---PEIDTNHIDFRVGLRFPSPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVC-----SGQCEWRL
        +E E  +GS   +    G++D +  D  G  F    P +  N +   +G R+ SP  L+  +  YAIK+ YN++F K D VR+T  C     S  C +R+
Subjt:  EEVESSYGSYLNLHTPHGSDDEE--DVNGPEFM---PEIDTNHIDFRVGLRFPSPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVC-----SGQCEWRL

Query:  HASVIENDNTIQIMTYIDAFHLKGLCQEQLMAA---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE
        HAS +  +  I     +D   LKG C+ +L+ A   D N+ +YPIAW+V   E K +W WFL LL   +      G+  ISDQ +
Subjt:  HASVIENDNTIQIMTYIDAFHLKGLCQEQLMAA---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE

ONI10421.1 hypothetical protein PRUPE_4G046500 [Prunus persica]3.4e-1723.8Show/hide
Query:  EPQSNGLMEVDVFEESYVSVGDT----SNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFP
        +  ++ +++ D F +  V   +T        K +WE         D+ V+   ++    +   LH+   SD+E       E   + D ++  F VG++FP
Subjt:  EPQSNGLMEVDVFEESYVSVGDT----SNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFP

Query:  SPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------
        S KVLK AI++Y    +Y  + +KNDK R++  C   C+WRL+AS+++ +NT QI +Y                                          
Subjt:  SPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------

Query:  ------------------------------------------------------------------------------------IDAFHLKGLCQEQLMA
                                                                                            +DA HLKG  Q QL+ 
Subjt:  ------------------------------------------------------------------------------------IDAFHLKGLCQEQLMA

Query:  A---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE
        +   D NDN+YPIA+ VA+ E+KDSW WFL LL   +G     G+ FISDQQ+
Subjt:  A---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE

VVA36347.1 PREDICTED: transposon [Prunus dulcis]4.4e-1725.97Show/hide
Query:  ESYVSVGDTSNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFPSPKVLKDAIKLYAIKNAY
        E+++  G      K +WE       N+ V+ D    E  Y S   LH+   S +E       EF  + D ++  F VG++FPS KVLK AI++Y    +Y
Subjt:  ESYVSVGDTSNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFPSPKVLKDAIKLYAIKNAY

Query:  NMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------------------------
          + +KNDK R++  C   C+WRL+AS+++ +NT QI +Y                                                            
Subjt:  NMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------------------------

Query:  ------------------------------------------------------------------IDAFHLKGLCQEQLMAA---DRNDNLYPIAWVVA
                                                                          +DA HLKG  Q QL+ A   D NDN+YPIA+ VA
Subjt:  ------------------------------------------------------------------IDAFHLKGLCQEQLMAA---DRNDNLYPIAWVVA

Query:  KAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE
        + E+KDSW WFL LL   +G     G+ FISDQQ+
Subjt:  KAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE

XP_020417204.1 uncharacterized protein LOC18781319 [Prunus persica]3.4e-1723.8Show/hide
Query:  EPQSNGLMEVDVFEESYVSVGDT----SNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFP
        +  ++ +++ D F +  V   +T        K +WE         D+ V+   ++    +   LH+   SD+E       E   + D ++  F VG++FP
Subjt:  EPQSNGLMEVDVFEESYVSVGDT----SNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFP

Query:  SPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------
        S KVLK AI++Y    +Y  + +KNDK R++  C   C+WRL+AS+++ +NT QI +Y                                          
Subjt:  SPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------

Query:  ------------------------------------------------------------------------------------IDAFHLKGLCQEQLMA
                                                                                            +DA HLKG  Q QL+ 
Subjt:  ------------------------------------------------------------------------------------IDAFHLKGLCQEQLMA

Query:  A---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE
        +   D NDN+YPIA+ VA+ E+KDSW WFL LL   +G     G+ FISDQQ+
Subjt:  A---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE

XP_034229423.1 uncharacterized protein LOC117638399 [Prunus dulcis]5.3e-1825.57Show/hide
Query:  PQSNGLMEVDVFEESYVSVGDT----SNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFPS
        P ++ +++ D F +  V   +T        K +WE       N+ V+ D    E  Y S   LH+   S +E       EF  + D ++  F VG++FPS
Subjt:  PQSNGLMEVDVFEESYVSVGDT----SNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFPS

Query:  PKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY-------------------------------------------
         KVLK AI++Y    +Y  + +KNDK R++  C   C+WRL+AS+++ +NT QI +Y                                           
Subjt:  PKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY-------------------------------------------

Query:  -----------------------------------------------------------------------------------IDAFHLKGLCQEQLMAA
                                                                                           +DA HLKG  Q QL+ A
Subjt:  -----------------------------------------------------------------------------------IDAFHLKGLCQEQLMAA

Query:  ---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE
           D NDN+YPIA+ VA+ E+KDSW WFL LL   +G     G+ FISDQQ+
Subjt:  ---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE

TrEMBL top hitse value%identityAlignment
A0A251PFQ5 ZnF_PMZ domain-containing protein1.6e-1723.8Show/hide
Query:  EPQSNGLMEVDVFEESYVSVGDT----SNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFP
        +  ++ +++ D F +  V   +T        K +WE         D+ V+   ++    +   LH+   SD+E       E   + D ++  F VG++FP
Subjt:  EPQSNGLMEVDVFEESYVSVGDT----SNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFP

Query:  SPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------
        S KVLK AI++Y    +Y  + +KNDK R++  C   C+WRL+AS+++ +NT QI +Y                                          
Subjt:  SPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------

Query:  ------------------------------------------------------------------------------------IDAFHLKGLCQEQLMA
                                                                                            +DA HLKG  Q QL+ 
Subjt:  ------------------------------------------------------------------------------------IDAFHLKGLCQEQLMA

Query:  A---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE
        +   D NDN+YPIA+ VA+ E+KDSW WFL LL   +G     G+ FISDQQ+
Subjt:  A---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE

A0A5E4G990 PREDICTED: transposon2.2e-1725.97Show/hide
Query:  ESYVSVGDTSNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFPSPKVLKDAIKLYAIKNAY
        E+++  G      K +WE       N+ V+ D    E  Y S   LH+   S +E       EF  + D ++  F VG++FPS KVLK AI++Y    +Y
Subjt:  ESYVSVGDTSNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFPSPKVLKDAIKLYAIKNAY

Query:  NMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------------------------
          + +KNDK R++  C   C+WRL+AS+++ +NT QI +Y                                                            
Subjt:  NMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------------------------

Query:  ------------------------------------------------------------------IDAFHLKGLCQEQLMAA---DRNDNLYPIAWVVA
                                                                          +DA HLKG  Q QL+ A   D NDN+YPIA+ VA
Subjt:  ------------------------------------------------------------------IDAFHLKGLCQEQLMAA---DRNDNLYPIAWVVA

Query:  KAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE
        + E+KDSW WFL LL   +G     G+ FISDQQ+
Subjt:  KAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE

A0A6S7NLC0 Uncharacterized protein1.6e-1734.59Show/hide
Query:  EEVESSYGSYLNLHTPHGSDDEE--DVNGPEFM---PEIDTNHIDFRVGLRFPSPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVC-----SGQCEWRL
        +E E  +GS   +    G++D +  D  G  F    P +  N +   +G R+ SP  L+  +  YAIK+ YN++F K D VR+T  C     S  C +R+
Subjt:  EEVESSYGSYLNLHTPHGSDDEE--DVNGPEFM---PEIDTNHIDFRVGLRFPSPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVC-----SGQCEWRL

Query:  HASVIENDNTIQIMTYIDAFHLKGLCQEQLMAA---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE
        HAS +  +  I     +D   LKG C+ +L+ A   D N+ +YPIAW+V   E K +W WFL LL   +      G+  ISDQ +
Subjt:  HASVIENDNTIQIMTYIDAFHLKGLCQEQLMAA---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE

M5WVZ2 SWIM-type domain-containing protein (Fragment)4.1e-1627.85Show/hide
Query:  EFMPEIDTNHIDFRVGLRFPSPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVC----SGQCEWRLHASVIENDNTIQIMTY------------------
        +F PE D N+  F++GLRF S  V + A++ Y++ N   ++F KN+K +V  VC    +G+C W ++ S +   + +QI +Y                  
Subjt:  EFMPEIDTNHIDFRVGLRFPSPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVC----SGQCEWRLHASVIENDNTIQIMTY------------------

Query:  --------------------------------------------------IDAFHLKGLCQEQLMAA---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQ
                                                          +DA H+KG    QL++A   D N+ +YPI + VA+AE    WTWFL LL 
Subjt:  --------------------------------------------------IDAFHLKGLCQEQLMAA---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQ

Query:  LVIGCFFSKGYLFISDQQE
        + +G   S GY+FI+D+Q+
Subjt:  LVIGCFFSKGYLFISDQQE

M5X0G1 ZnF_PMZ domain-containing protein (Fragment)1.6e-1723.8Show/hide
Query:  EPQSNGLMEVDVFEESYVSVGDT----SNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFP
        +  ++ +++ D F +  V   +T        K +WE         D+ V+   ++    +   LH+   SD+E       E   + D ++  F VG++FP
Subjt:  EPQSNGLMEVDVFEESYVSVGDT----SNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNG-PEFMPEIDTNHIDFRVGLRFP

Query:  SPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------
        S KVLK AI++Y    +Y  + +KNDK R++  C   C+WRL+AS+++ +NT QI +Y                                          
Subjt:  SPKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTY------------------------------------------

Query:  ------------------------------------------------------------------------------------IDAFHLKGLCQEQLMA
                                                                                            +DA HLKG  Q QL+ 
Subjt:  ------------------------------------------------------------------------------------IDAFHLKGLCQEQLMA

Query:  A---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE
        +   D NDN+YPIA+ VA+ E+KDSW WFL LL   +G     G+ FISDQQ+
Subjt:  A---DRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCFFSKGYLFISDQQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATTTTTCTAGAGTGGCATCCCATTCGTGTTGAAAACGAACCACAGTCTAATGGTTTAATGGAAGTAGATGTGTTTGAAGAGTCTTATGTAAGTGTGGGGGACAC
TTCTAATGTGTCTAAGGAGTCTTGGGAGTATGTTCATTCATTGAATTTGAATGTTGATGTTGATGTGGATTGTGAGGAAGTAGAGTCATCTTATGGTTCATATTTAAATC
TGCATACACCTCATGGTTCTGATGATGAAGAGGATGTGAATGGACCAGAATTTATGCCTGAGATTGACACGAACCACATTGATTTTAGAGTGGGACTGAGGTTTCCTAGC
CCAAAAGTTCTGAAAGATGCCATAAAATTGTATGCAATTAAGAATGCTTACAATATGAGATTCATTAAAAATGATAAGGTGAGGGTCACTATTGTTTGTTCTGGGCAATG
CGAATGGAGATTGCATGCAAGTGTTATTGAGAATGATAACACTATTCAGATTATGACCTACATAGATGCTTTCCATTTAAAAGGCCTATGTCAAGAACAGTTAATGGCTG
CAGATAGGAATGATAATCTGTATCCTATTGCGTGGGTTGTTGCCAAGGCAGAAACAAAAGATAGTTGGACATGGTTTCTTGGACTACTACAGTTGGTCATTGGATGCTTT
TTTAGCAAAGGATACTTGTTCATCTCAGATCAACAAGAGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTATTTTTCTAGAGTGGCATCCCATTCGTGTTGAAAACGAACCACAGTCTAATGGTTTAATGGAAGTAGATGTGTTTGAAGAGTCTTATGTAAGTGTGGGGGACAC
TTCTAATGTGTCTAAGGAGTCTTGGGAGTATGTTCATTCATTGAATTTGAATGTTGATGTTGATGTGGATTGTGAGGAAGTAGAGTCATCTTATGGTTCATATTTAAATC
TGCATACACCTCATGGTTCTGATGATGAAGAGGATGTGAATGGACCAGAATTTATGCCTGAGATTGACACGAACCACATTGATTTTAGAGTGGGACTGAGGTTTCCTAGC
CCAAAAGTTCTGAAAGATGCCATAAAATTGTATGCAATTAAGAATGCTTACAATATGAGATTCATTAAAAATGATAAGGTGAGGGTCACTATTGTTTGTTCTGGGCAATG
CGAATGGAGATTGCATGCAAGTGTTATTGAGAATGATAACACTATTCAGATTATGACCTACATAGATGCTTTCCATTTAAAAGGCCTATGTCAAGAACAGTTAATGGCTG
CAGATAGGAATGATAATCTGTATCCTATTGCGTGGGTTGTTGCCAAGGCAGAAACAAAAGATAGTTGGACATGGTTTCTTGGACTACTACAGTTGGTCATTGGATGCTTT
TTTAGCAAAGGATACTTGTTCATCTCAGATCAACAAGAGGTATGA
Protein sequenceShow/hide protein sequence
MPIFLEWHPIRVENEPQSNGLMEVDVFEESYVSVGDTSNVSKESWEYVHSLNLNVDVDVDCEEVESSYGSYLNLHTPHGSDDEEDVNGPEFMPEIDTNHIDFRVGLRFPS
PKVLKDAIKLYAIKNAYNMRFIKNDKVRVTIVCSGQCEWRLHASVIENDNTIQIMTYIDAFHLKGLCQEQLMAADRNDNLYPIAWVVAKAETKDSWTWFLGLLQLVIGCF
FSKGYLFISDQQEV