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Tan0021247 (gene) of Snake gourd v1 genome

Gene IDTan0021247
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMini zinc finger
Genome locationLG05:75562217..75562957
RNA-Seq ExpressionTan0021247
SyntenyTan0021247
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036083.1 mini zinc finger protein 1 [Cucumis melo var. makuwa]4.4e-3880.95Show/hide
Query:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRSS+G      SS  N++ + +SSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGS+GALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

XP_004137410.1 mini zinc finger protein 1 [Cucumis sativus]1.2e-3881.9Show/hide
Query:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRSS+G      SS  N++ + +SSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSHGALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

XP_008442199.1 PREDICTED: mini zinc finger protein 1 [Cucumis melo]7.6e-3880.95Show/hide
Query:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRSS+G      SS  N++ + +SSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGS+GALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

XP_022949221.1 mini zinc finger protein 1 [Cucurbita moschata]7.3e-4190.91Show/hide
Query:  MMKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MMKKRQV+VKR +DGSSNRNSS SSTSSS VRS+VRYGECQKNHAANIGGYAVDGC EFLANGEEGS+GALTCAACGCHRNFHRREVETEVVCEY PPN
Subjt:  MMKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN

XP_038688169.1 mini zinc finger protein 1-like [Tripterygium wilfordii]3.4e-3880.81Show/hide
Query:  MMKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MMKKRQVVVK  SDG++NR S  +ST+SS V + +RYGECQKNHAAN+GGYAVDGCREF+A+GEEG++GALTCAACGCHRNFHRREVETEVVCEYSPPN
Subjt:  MMKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN

TrEMBL top hitse value%identityAlignment
A0A0A0LVI9 ZF-HD dimerization-type domain-containing protein5.7e-3981.9Show/hide
Query:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRSS+G      SS  N++ + +SSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSHGALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

A0A5A7SZK7 Mini zinc finger protein 12.1e-3880.95Show/hide
Query:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRSS+G      SS  N++ + +SSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGS+GALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

A0A5D3BJJ4 Mini zinc finger protein 13.7e-3880.95Show/hide
Query:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRSS+G      SS  N++ + +SSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGS+GALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSSDG------SSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

A0A6J1GBE8 mini zinc finger protein 13.5e-4190.91Show/hide
Query:  MMKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MMKKRQV+VKR +DGSSNRNSS SSTSSS VRS+VRYGECQKNHAANIGGYAVDGC EFLANGEEGS+GALTCAACGCHRNFHRREVETEVVCEY PPN
Subjt:  MMKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN

A0A6J1K9G7 mini zinc finger protein 13.5e-4190.91Show/hide
Query:  MMKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MMKKRQV+VKR +DGSSNRNSS SSTSSS VRS+VRYGECQKNHAANIGGYAVDGC EFLANGEEGS+GALTCAACGCHRNFHRREVETEVVCEY PPN
Subjt:  MMKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 19.7e-2059.26Show/hide
Query:  DGSSNRNSSNSSTSSSVV------RSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVE
        D S+ +  +N ST+++          VVRY ECQ+NHAA+IGG+AVDGCREF+A+G EG+  AL CAACGCHR+FHRREVE
Subjt:  DGSSNRNSSNSSTSSSVV------RSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVE

Q0J5F8 Mini zinc finger protein 41.5e-2072.88Show/hide
Query:  VRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC
        VRYGEC++NHAA +GG+AVDGCREFLA GEEG+ GAL CAACGCHR+FHRR V  +  C
Subjt:  VRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVC

Q2Q493 Mini zinc finger protein 37.9e-3072.45Show/hide
Query:  MKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MKKRQVV+K+       R SS + TSSS   S VRY ECQKNHAANIGGYAVDGCREF+A+G +    ALTCAACGCHRNFHRREV+TEVVCEYSPPN
Subjt:  MKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN

Q9CA51 Mini zinc finger protein 11.3e-3271.57Show/hide
Query:  MMKKRQVVVK---RSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSP
        MMKKRQ+V+K   R+S+ SS+  +++SS+SSS + S VRY ECQKNHAANIGGYAVDGCREF+A G EG+  AL CAACGCHRNFHR+EV+TEVVCEYSP
Subjt:  MMKKRQVVVK---RSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSP

Query:  PN
        PN
Subjt:  PN

Q9LJW5 Mini zinc finger protein 22.3e-2966.33Show/hide
Query:  MKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPP
        M+KRQVV++R+S    +R   +SST+SS+    VRYGECQKNHAA +GGYAVDGCREF+A+ GEEG+  ALTCAACGCHR+FHRRE+ETEVVC+ + P
Subjt:  MKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPP

Arabidopsis top hitse value%identityAlignment
AT1G14440.1 homeobox protein 312.4e-1855.07Show/hide
Query:  VVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPP
        + + +++Y EC KNHAA +GG A DGC EF+ +GE+GS  ALTC+AC CHRNFHR+EVE E+      P
Subjt:  VVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPP

AT1G18835.1 mini zinc finger5.6e-3172.45Show/hide
Query:  MKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MKKRQVV+K+       R SS + TSSS   S VRY ECQKNHAANIGGYAVDGCREF+A+G +    ALTCAACGCHRNFHRREV+TEVVCEYSPPN
Subjt:  MKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPN

AT1G74660.1 mini zinc finger 19.2e-3471.57Show/hide
Query:  MMKKRQVVVK---RSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSP
        MMKKRQ+V+K   R+S+ SS+  +++SS+SSS + S VRY ECQKNHAANIGGYAVDGCREF+A G EG+  AL CAACGCHRNFHR+EV+TEVVCEYSP
Subjt:  MMKKRQVVVK---RSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSP

Query:  PN
        PN
Subjt:  PN

AT2G02540.1 homeobox protein 213.8e-1962.5Show/hide
Query:  VVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSP
        V++Y EC KNHAA +GG A+DGC EF+ +GEEGS  ALTC+ C CHRNFHRRE E E    +SP
Subjt:  VVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSP

AT3G28917.1 mini zinc finger 21.6e-3066.33Show/hide
Query:  MKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPP
        M+KRQVV++R+S    +R   +SST+SS+    VRYGECQKNHAA +GGYAVDGCREF+A+ GEEG+  ALTCAACGCHR+FHRRE+ETEVVC+ + P
Subjt:  MKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATGATGAAGAAACGCCAAGTAGTTGTTAAAAGATCATCAGATGGATCATCAAATAGAAACAGCAGCAACAGCAGTACTTCATCTTCAGTTGTGAGAAGTGTGGT
TAGATATGGAGAGTGTCAAAAGAATCATGCTGCCAATATTGGTGGATATGCTGTTGATGGTTGCAGAGAATTCTTGGCTAATGGAGAAGAAGGCTCTCATGGAGCTCTCA
CTTGTGCTGCTTGTGGCTGCCACAGGAATTTCCATAGAAGAGAAGTTGAAACTGAAGTGGTTTGTGAGTATTCTCCTCCTAATGATTGA
mRNA sequenceShow/hide mRNA sequence
AAAAGAAAAGCTCTCTAGTGTAGCTAGGGTTTAGGGTTAATGTTCATAGGGCGCCAGTCAATCCTTTAAATTTTATTCTTCTGGATTCCTCCTCTCTCTCTCTCTCTCTC
TCACACACACACACACACACACAGCTTTCTTTTTAGATTTTGATGAGAGAGAACAAAATAAAAAACAAAGGCAAACCCAAAACTCCCCACAAAGCCATAATTTGAGGTGT
TCATATATCGATCTCAGAAATTAAAAGGTAGAGGTTTAGGGTTTTTGTTTGTGGAATTAATTATAATATTATATGATCATGATGAAGAAACGCCAAGTAGTTGTTAAAAG
ATCATCAGATGGATCATCAAATAGAAACAGCAGCAACAGCAGTACTTCATCTTCAGTTGTGAGAAGTGTGGTTAGATATGGAGAGTGTCAAAAGAATCATGCTGCCAATA
TTGGTGGATATGCTGTTGATGGTTGCAGAGAATTCTTGGCTAATGGAGAAGAAGGCTCTCATGGAGCTCTCACTTGTGCTGCTTGTGGCTGCCACAGGAATTTCCATAGA
AGAGAAGTTGAAACTGAAGTGGTTTGTGAGTATTCTCCTCCTAATGATTGATATTTTAACTATAATTATATAATACTACACCAAAATTATTATTAATAAATACCCTTTTC
ATATATTTATAAACATATATATATATATATTTTTATTCATGTCACCAAACAATTGGTTATGTGGTTTCTTTGAAGAATGAG
Protein sequenceShow/hide protein sequence
MIMMKKRQVVVKRSSDGSSNRNSSNSSTSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSHGALTCAACGCHRNFHRREVETEVVCEYSPPND