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Tan0021266 (gene) of Snake gourd v1 genome

Gene IDTan0021266
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLYR motif-containing protein At3g19508
Genome locationLG01:6358120..6359245
RNA-Seq ExpressionTan0021266
SyntenyTan0021266
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140718.1 LYR motif-containing protein At3g19508 [Cucumis sativus]5.7e-3692.59Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICY
        MEKALR+YGEVLRLVR+LPKDTRPYYAKY RENFVNYREVDA D+KSLEELFHRAYNHSLWVLNKYSVDGSAADKL+EICY
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICY

XP_008456173.1 PREDICTED: LYR motif-containing protein At3g19508 [Cucumis melo]4.7e-3896.34Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS
        MEKALR+YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDAND+KSLEELFHRAYNHSLWVLNKYSVDGSAADKL+EICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS

XP_015892821.1 LYR motif-containing protein At3g19508 [Ziziphus jujuba]1.7e-3590.24Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS
        MEKALRIYGE+LRLVRRLPKDTRPYYAKYARENFVNYREVDANDS +LEELFHRAYNHS+WVLNKYSVD SAADKL+E+CY+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS

XP_022941949.1 LYR motif-containing protein At3g19508 [Cucurbita moschata]4.8e-3591.46Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS
        MEKALRIY EVLRLVRRLPKD+RPYYAKYARENFVNYREVDAND+KSLEELFHRAYNHS+WVLNKYSV+GSAADKL+EIC S
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS

XP_038898400.1 LYR motif-containing protein At3g19508 [Benincasa hispida]5.2e-3795.12Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS
        MEKALRIYGEVLRLVRRLPKD+RPYYAKYARENFVNYREVDAND+KSLEELFHRAY HSLWVLNKYSVDGSAADKL+EICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS

TrEMBL top hitse value%identityAlignment
A0A0A0L970 Uncharacterized protein2.8e-3692.59Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICY
        MEKALR+YGEVLRLVR+LPKDTRPYYAKY RENFVNYREVDA D+KSLEELFHRAYNHSLWVLNKYSVDGSAADKL+EICY
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICY

A0A1S3C3W4 LYR motif-containing protein At3g195082.3e-3896.34Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS
        MEKALR+YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDAND+KSLEELFHRAYNHSLWVLNKYSVDGSAADKL+EICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS

A0A5A7T6G8 LYR motif-containing protein2.3e-3896.34Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS
        MEKALR+YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDAND+KSLEELFHRAYNHSLWVLNKYSVDGSAADKL+EICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS

A0A6J1FPX9 LYR motif-containing protein At3g195082.3e-3591.46Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS
        MEKALRIY EVLRLVRRLPKD+RPYYAKYARENFVNYREVDAND+KSLEELFHRAYNHS+WVLNKYSV+GSAADKL+EIC S
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS

A0A6P4A9N6 LYR motif-containing protein At3g195088.0e-3690.24Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS
        MEKALRIYGE+LRLVRRLPKDTRPYYAKYARENFVNYREVDANDS +LEELFHRAYNHS+WVLNKYSVD SAADKL+E+CY+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS

SwissProt top hitse value%identityAlignment
A9SNJ1 LYR motif-containing protein PHYPADRAFT_1868631.5e-1055.17Show/hide
Query:  YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNK
        Y EVL+LV+RLP  +R YYA+YARENFV Y EV+  D +S+  L  R ++H+ WVL K
Subjt:  YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNK

Q1G3M2 LYR motif-containing protein At3g195081.2e-2874.07Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICY
        M+K LR+YG V+RLVR LP D+RPYYAKYARENFVNYREVD +++ SL+ELF RAYNHSLWVL KYS+D SAA KL+EIC+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICY

Arabidopsis top hitse value%identityAlignment
AT3G19508.1 unknown protein8.5e-3074.07Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICY
        M+K LR+YG V+RLVR LP D+RPYYAKYARENFVNYREVD +++ SL+ELF RAYNHSLWVL KYS+D SAA KL+EIC+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCACTGAGAATCTACGGCGAAGTTCTGCGGCTAGTGAGGCGGTTGCCGAAGGACACGAGGCCTTACTACGCCAAATACGCACGTGAGAATTTCGTCAACTA
TAGAGAAGTCGATGCGAACGATTCCAAATCCCTAGAAGAACTCTTCCACAGAGCTTACAACCACTCCCTTTGGGTTCTCAACAAGTATTCGGTGGATGGATCCGCGGCGG
ATAAGCTGAGGGAGATCTGTTATAGTTAG
mRNA sequenceShow/hide mRNA sequence
AAGAAAACTGGGCCTGAATAATGAAGGATTCGTGAACACGTTGGCCCAAACGGCAAGCAGAAGCCCTAGACGGTGGGGAGAGAAACCGAAGCGGTCCAAATCGAGAACCA
GAGGGCGGCACATTTCGATCGGAGAGAAATGGAGAAGGCACTGAGAATCTACGGCGAAGTTCTGCGGCTAGTGAGGCGGTTGCCGAAGGACACGAGGCCTTACTACGCCA
AATACGCACGTGAGAATTTCGTCAACTATAGAGAAGTCGATGCGAACGATTCCAAATCCCTAGAAGAACTCTTCCACAGAGCTTACAACCACTCCCTTTGGGTTCTCAAC
AAGTATTCGGTGGATGGATCCGCGGCGGATAAGCTGAGGGAGATCTGTTATAGTTAGTGTGCGGGCTTGTCTGTTAATTGTTTGAAATAATGCACCGACGGGATCGGCGT
CGGGTTTTAAAGTTGAAACTGGTGGCGCCATCGATTCTGATGAATTCATTGCCGGTAAGGGATTGGAGGATTGTTGATTTTAAAAGAAACACAGGATGCAAATTGCTCTT
CTTTGAATCTTCAATTCGTGTAAAATAAAGTTTTCGAGTTTGCATGACAGAATTCCTCTTTCTGTTTCATCTTTTTTGAAAAGAAAATTATTACTTTTCACCCTGAATCA
AATTTAACCTTGATTAAATTTGACAGAGAACTTTCTAGTAATGGTACTCAATGCTGATTTTCGAGAAAATTTCAACTATTGTAGTAATAGATGTCCATCCTATTTTTGAA
ATTTATGCGAAAAAAGAAACATTTTTTTTTTCAAGCACTTTACGTGCATTTGATTTGTGAGGACAACGTATGGAGAAAAGAAAGAGACCATAAATAAAATCACGAGTAAG
AGTGAGCCTACAAGAGCGTCAGTTCAAAGTCCATGAGAGAGCGAGCGAGCGAGTTATCATTTGCAAGAAGTCACATTGTGGCTCAACGTGAGTGTATTGTAAGCGAGAGT
GAGTGTGGTGGTACCGTTAATATGAGCGTGAGCGAG
Protein sequenceShow/hide protein sequence
MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDSKSLEELFHRAYNHSLWVLNKYSVDGSAADKLREICYS