; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021267 (gene) of Snake gourd v1 genome

Gene IDTan0021267
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationLG10:49948459..49949127
RNA-Seq ExpressionTan0021267
SyntenyTan0021267
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW43526.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]5.1e-7161.71Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        +LIYVDDII+TGND+  I+ L++ LS EF+LKDLGSL+YFLG+EV+ +PNG  ++Q+KY RD+L   KMME +PI+TPMA        +E+ +DP  YR 
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        LVGSLQYLT TRP+I ++VNK CQH Q P    LR VKRILRYLK  + HGI F K SSL L  FCDADWA C  TRRST G+C+FLG+N ISWSSK+QP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        T+SRSS+E EYRS+A++ AE+T
Subjt:  TISRSSSEVEYRSMANATAELT

RVX04530.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]5.1e-7161.71Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        +LIYVDDII+TGND+  I+ L++ LS EF+LKDLGSL+YFLG+EV+ +PNG  ++Q+KY RD+L   KMME +PI+TPMA        +E+ +DP  YR 
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        LVGSLQYLT TRP+I ++VNK CQH Q P    LR VKRILRYLK  + HGI F K SSL L  FCDADWA C  TRRST G+C+FLG+N ISWSSK+QP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        T+SRSS+E EYRS+A++ AE+T
Subjt:  TISRSSSEVEYRSMANATAELT

RVX04589.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.1e-7061.71Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        +LIYVDDII+TGND+  I+ L+  LS EF+LKDLGSL+YFLG+EV+ +PNG  ++Q+KY RD+L   KMME +PI+TPMA        +E+ +DP  YR 
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        LVGSLQYLT TRP+I ++VNK CQH Q P    LR VKRILRYLK  + HGI F K SSL L  FCDADWA C  TRRST G+C+FLG+N ISWSSK+QP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        T+SRSS+E EYRS+A++ AE+T
Subjt:  TISRSSSEVEYRSMANATAELT

XP_022141787.1 uncharacterized protein LOC111012071 [Momordica charantia]1.0e-7164.41Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        MLIYVDDIIL G +++ +  L+  L +EFALKDLG+L+YFL IEV + P G  +TQSKYT+D+LLK  M+ AS   T MA +     N+ +LVD   YRS
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        +VGSLQYLTLTRP+I Y+VNKVCQHMQ   + + R+VKRILRYLK  L+HGITF KNS+LNLYAFCDADW  C  TRRST G+C+FL +N ISWSSKKQP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        TI+RSS+E EYR+MAN TAELT
Subjt:  TISRSSSEVEYRSMANATAELT

XP_022157372.1 uncharacterized protein LOC111024092 [Momordica charantia]2.6e-9178.38Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        MLI VDDIILTGN+  +I  LV  LS EFALKDLG+L+YFLG+EVQ+  NGFHITQS+YTRDIL+K KM+E SPISTPMAT+KNKC +E ELVDP AYRS
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        LVGSLQYLTLTRP+I + VNK CQHMQQPQ+QHLR+VK ILRYLK  LNHGI+F KNSSLNLYAFCDADWA C  TRRST G  VFLGSNIISWSSKKQP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        T+SRSSS+ EYRS+ANATAELT
Subjt:  TISRSSSEVEYRSMANATAELT

TrEMBL top hitse value%identityAlignment
A0A438E6Z5 Retrovirus-related Pol polyprotein from transposon TNT 1-942.5e-7161.71Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        +LIYVDDII+TGND+  I+ L++ LS EF+LKDLGSL+YFLG+EV+ +PNG  ++Q+KY RD+L   KMME +PI+TPMA        +E+ +DP  YR 
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        LVGSLQYLT TRP+I ++VNK CQH Q P    LR VKRILRYLK  + HGI F K SSL L  FCDADWA C  TRRST G+C+FLG+N ISWSSK+QP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        T+SRSS+E EYRS+A++ AE+T
Subjt:  TISRSSSEVEYRSMANATAELT

A0A438J6E1 Retrovirus-related Pol polyprotein from transposon RE12.5e-7161.71Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        +LIYVDDII+TGND+  I+ L++ LS EF+LKDLGSL+YFLG+EV+ +PNG  ++Q+KY RD+L   KMME +PI+TPMA        +E+ +DP  YR 
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        LVGSLQYLT TRP+I ++VNK CQH Q P    LR VKRILRYLK  + HGI F K SSL L  FCDADWA C  TRRST G+C+FLG+N ISWSSK+QP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        T+SRSS+E EYRS+A++ AE+T
Subjt:  TISRSSSEVEYRSMANATAELT

A0A438J6K3 Retrovirus-related Pol polyprotein from transposon RE15.5e-7161.71Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        +LIYVDDII+TGND+  I+ L+  LS EF+LKDLGSL+YFLG+EV+ +PNG  ++Q+KY RD+L   KMME +PI+TPMA        +E+ +DP  YR 
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        LVGSLQYLT TRP+I ++VNK CQH Q P    LR VKRILRYLK  + HGI F K SSL L  FCDADWA C  TRRST G+C+FLG+N ISWSSK+QP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        T+SRSS+E EYRS+A++ AE+T
Subjt:  TISRSSSEVEYRSMANATAELT

A0A6J1CKU6 uncharacterized protein LOC1110120715.0e-7264.41Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        MLIYVDDIIL G +++ +  L+  L +EFALKDLG+L+YFL IEV + P G  +TQSKYT+D+LLK  M+ AS   T MA +     N+ +LVD   YRS
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        +VGSLQYLTLTRP+I Y+VNKVCQHMQ   + + R+VKRILRYLK  L+HGITF KNS+LNLYAFCDADW  C  TRRST G+C+FL +N ISWSSKKQP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        TI+RSS+E EYR+MAN TAELT
Subjt:  TISRSSSEVEYRSMANATAELT

A0A6J1DUB4 uncharacterized protein LOC1110240921.3e-9178.38Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        MLI VDDIILTGN+  +I  LV  LS EFALKDLG+L+YFLG+EVQ+  NGFHITQS+YTRDIL+K KM+E SPISTPMAT+KNKC +E ELVDP AYRS
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        LVGSLQYLTLTRP+I + VNK CQHMQQPQ+QHLR+VK ILRYLK  LNHGI+F KNSSLNLYAFCDADWA C  TRRST G  VFLGSNIISWSSKKQP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        T+SRSSS+ EYRS+ANATAELT
Subjt:  TISRSSSEVEYRSMANATAELT

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.8e-2631.42Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMAT--NKNKCQNEEELVDPQAY
        +L+YVDD+++   D   +      L  +F + DL  + +F+GI ++   +  +++QS Y + IL K  M   + +STP+ +  N     ++E+   P   
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMAT--NKNKCQNEEELVDPQAY

Query:  RSLVGSLQYLTL-TRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSL--NLYAFCDADWARCNITRRSTFGFCV-FLGSNIISW
        RSL+G L Y+ L TRP++T +VN + ++  +   +  +N+KR+LRYLK  ++  + F KN +    +  + D+DWA   I R+ST G+       N+I W
Subjt:  RSLVGSLQYLTL-TRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSL--NLYAFCDADWARCNITRRSTFGFCV-FLGSNIISW

Query:  SSKKQPTISRSSSEVEYRSMANATAE
        ++K+Q +++ SS+E EY ++  A  E
Subjt:  SSKKQPTISRSSSEVEYRSMANATAE

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-2333.33Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEV--QNVPNGFHITQSKYTRDILLKEKMMEASPISTPMA----TNKNKCQNEEELVD
        +L+YVDD+++ G D   I KL  +LS  F +KDLG     LG+++  +       ++Q KY   +L +  M  A P+STP+A     +K  C    E   
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEV--QNVPNGFHITQSKYTRDILLKEKMMEASPISTPMA----TNKNKCQNEEELVD

Query:  PQA---YRSLVGSLQY-LTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSN
          A   Y S VGSL Y +  TRP+I ++V  V + ++ P  +H   VK ILRYL+      + F   S   L  + DAD A     R+S+ G+       
Subjt:  PQA---YRSLVGSLQY-LTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSN

Query:  IISWSSKKQPTISRSSSEVEYRSMANATAEL
         ISW SK Q  ++ S++E EY +      E+
Subjt:  IISWSSKKQPTISRSSSEVEYRSMANATAEL

P92519 Uncharacterized mitochondrial protein AtMg008104.5e-6251.8Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        +L+YVDDI+LTG+ +  +  L+  LS  F++KDLG ++YFLGI+++  P+G  ++Q+KY   IL    M++  P+STP+    N   +  +  DP  +RS
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        +VG+LQYLTLTRP+I+Y+VN VCQ M +P L     +KR+LRY+K  + HG+   KNS LN+ AFCD+DWA C  TRRST GFC FLG NIISWS+K+QP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        T+SRSS+E EYR++A   AELT
Subjt:  TISRSSSEVEYRSMANATAELT

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE17.7e-5449.1Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATN-KNKCQNEEELVDPQAYR
        ML+YVDDI++TGND   +   + NLS  F++KD   L+YFLGIE + VP G H++Q +Y  D+L +  M+ A P++TPMA + K    +  +L DP  YR
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATN-KNKCQNEEELVDPQAYR

Query:  SLVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQ
         +VGSLQYL  TRP+I+Y+VN++ Q M  P  +HL+ +KRILRYL    NHGI   K ++L+L+A+ DADWA       ST G+ V+LG + ISWSSKKQ
Subjt:  SLVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQ

Query:  PTISRSSSEVEYRSMANATAEL
          + RSS+E EYRS+AN ++E+
Subjt:  PTISRSSSEVEYRSMANATAEL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.1e-5247.75Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATN-KNKCQNEEELVDPQAYR
        ML+YVDDI++TGND++ +   +  LS  F++K+   L+YFLGIE + VP G H++Q +YT D+L +  M+ A P++TPMAT+ K    +  +L DP  YR
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATN-KNKCQNEEELVDPQAYR

Query:  SLVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQ
         +VGSLQYL  TRP+++Y+VN++ Q+M  P   H   +KR+LRYL    +HGI   K ++L+L+A+ DADWA       ST G+ V+LG + ISWSSKKQ
Subjt:  SLVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQ

Query:  PTISRSSSEVEYRSMANATAEL
          + RSS+E EYRS+AN ++EL
Subjt:  PTISRSSSEVEYRSMANATAEL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.6e-4440.54Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKN-KCQNEEELVDPQAYR
        +L+YVDDII+  N+   + +L + L   F L+DLG L YFLG+E+     G +I Q KY  D+L +  ++   P S PM  +      +  + VD +AYR
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKN-KCQNEEELVDPQAYR

Query:  SLVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQ
         L+G L YL +TR +I+++VNK+ Q  + P+L H + V +IL Y+K  +  G+ +   + + L  F DA +  C  TRRST G+C+FLG+++ISW SKKQ
Subjt:  SLVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQ

Query:  PTISRSSSEVEYRSMANATAEL
          +S+SS+E EYR+++ AT E+
Subjt:  PTISRSSSEVEYRSMANATAEL

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.5e-1241.03Show/hide
Query:  YLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFC
        YLT+TRP++T++VN++ Q     +   ++ V ++L Y+K  +  G+ +   S L L AF D+DWA C  TRRS  GFC
Subjt:  YLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFC

ATMG00810.1 DNA/RNA polymerases superfamily protein3.2e-6351.8Show/hide
Query:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS
        +L+YVDDI+LTG+ +  +  L+  LS  F++KDLG ++YFLGI+++  P+G  ++Q+KY   IL    M++  P+STP+    N   +  +  DP  +RS
Subjt:  MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRS

Query:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP
        +VG+LQYLTLTRP+I+Y+VN VCQ M +P L     +KR+LRY+K  + HG+   KNS LN+ AFCD+DWA C  TRRST GFC FLG NIISWS+K+QP
Subjt:  LVGSLQYLTLTRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQP

Query:  TISRSSSEVEYRSMANATAELT
        T+SRSS+E EYR++A   AELT
Subjt:  TISRSSSEVEYRSMANATAELT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTATATACGTGGATGACATCATTCTAACTGGAAATGACTCTCTCTATATCACTAAATTGGTTGCTAACTTGAGTGTTGAATTTGCTTTGAAAGATTTAGGTTCCCT
CAATTATTTCTTAGGTATTGAAGTACAAAATGTTCCAAATGGATTCCACATCACACAAAGCAAATATACAAGGGATATTCTATTAAAAGAAAAGATGATGGAGGCTTCAC
CTATCTCAACCCCCATGGCAACTAACAAAAATAAGTGTCAAAATGAAGAAGAACTAGTCGATCCTCAAGCTTATAGAAGCTTAGTAGGTTCACTACAGTACCTCACACTC
ACAAGACCGAACATTACCTATTCTGTCAACAAAGTGTGTCAACACATGCAACAACCACAATTGCAACACCTAAGGAATGTAAAACGAATACTTCGTTATCTTAAAAGGAT
CCTGAATCATGGCATCACGTTTCTAAAAAATAGCTCACTAAATCTTTATGCCTTTTGTGATGCAGATTGGGCAAGATGCAACATAACACGACGAAGCACCTTTGGTTTCT
GTGTCTTTCTTGGGTCCAACATAATCTCTTGGTCCTCAAAGAAGCAACCAACTATCTCACGTTCAAGTTCAGAGGTTGAGTATCGATCCATGGCTAATGCTACAGCTGAA
CTCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTATATACGTGGATGACATCATTCTAACTGGAAATGACTCTCTCTATATCACTAAATTGGTTGCTAACTTGAGTGTTGAATTTGCTTTGAAAGATTTAGGTTCCCT
CAATTATTTCTTAGGTATTGAAGTACAAAATGTTCCAAATGGATTCCACATCACACAAAGCAAATATACAAGGGATATTCTATTAAAAGAAAAGATGATGGAGGCTTCAC
CTATCTCAACCCCCATGGCAACTAACAAAAATAAGTGTCAAAATGAAGAAGAACTAGTCGATCCTCAAGCTTATAGAAGCTTAGTAGGTTCACTACAGTACCTCACACTC
ACAAGACCGAACATTACCTATTCTGTCAACAAAGTGTGTCAACACATGCAACAACCACAATTGCAACACCTAAGGAATGTAAAACGAATACTTCGTTATCTTAAAAGGAT
CCTGAATCATGGCATCACGTTTCTAAAAAATAGCTCACTAAATCTTTATGCCTTTTGTGATGCAGATTGGGCAAGATGCAACATAACACGACGAAGCACCTTTGGTTTCT
GTGTCTTTCTTGGGTCCAACATAATCTCTTGGTCCTCAAAGAAGCAACCAACTATCTCACGTTCAAGTTCAGAGGTTGAGTATCGATCCATGGCTAATGCTACAGCTGAA
CTCACTTAG
Protein sequenceShow/hide protein sequence
MLIYVDDIILTGNDSLYITKLVANLSVEFALKDLGSLNYFLGIEVQNVPNGFHITQSKYTRDILLKEKMMEASPISTPMATNKNKCQNEEELVDPQAYRSLVGSLQYLTL
TRPNITYSVNKVCQHMQQPQLQHLRNVKRILRYLKRILNHGITFLKNSSLNLYAFCDADWARCNITRRSTFGFCVFLGSNIISWSSKKQPTISRSSSEVEYRSMANATAE
LT