; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021297 (gene) of Snake gourd v1 genome

Gene IDTan0021297
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationLG01:10855008..10860639
RNA-Seq ExpressionTan0021297
SyntenyTan0021297
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0034198 - cellular response to amino acid starvation (biological process)
GO:1904263 - positive regulation of TORC1 signaling (biological process)
GO:0031080 - nuclear pore outer ring (cellular component)
GO:0035859 - Seh1-associated complex (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR037363 - Sec13/Seh1 family
IPR037597 - Nucleoporin Seh1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600526.1 Protein SEH1, partial [Cucurbita argyrosperma subsp. sororia]6.6e-17692.35Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWNYSA+RL TGSADGT+VIFDS DPSSSSTSLT TSNFKAHEAAIF+IVWVPPEYGDS+ACICSDG++SL EEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        L KHFKSNSSQI+DIQFGNSSSGLKMIAAFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGER+QSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQN+GRPYEVIAVATQKG+AIWRLGLNPD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

KAG7031165.1 Protein SEH1 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-17592.35Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWNYSA+RL TGSADGT+VIFDS DPSSSSTSLT TSNFKAHE AIF+IVWVPPEYGDS+ACICSDG++SL EEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        L KHFKSNSSQI+DIQFGNSSSGLKMIAAFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGER+QSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQN+GRPYEVIAVATQKGIAIWRLGLNPD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022942103.1 protein SEH1 [Cucurbita moschata]1.1e-17592.35Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWNYSA+RL TGSADGT+VIFDS DPSSSSTSLT TSNFKAHEAAIF+IVWVPPEYGDS+ACICSDG++SL EEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        L KHFKSNSSQI+DIQFGNSSSGLKMIAAFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGER+QSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQN+GRPYEVIAVATQKGIAIWRLGLNPD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_023547085.1 protein SEH1 [Cucurbita pepo subsp. pepo]8.6e-17692.66Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWNYSA+RL TGSADGT+VIFDS DPSSSSTSLT TSNFK HEAAIF+IVWVPPEYGDS+ACICSDG++SL EEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        L KHFKSNSSQILDIQFGNSSSGLKMIAAFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGER+QSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQN+GRPYEVIAVATQKGIAIWRLGLNPD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_038897768.1 protein SEH1 [Benincasa hispida]1.7e-17693.58Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        MEKAMAT  KGTLCSAWNYSANRLATGSADGTL+IFDSPDPSSSSTSLT TSNFK HEAAI +IVWVPPEYGDSVACICSDGT+SL EEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        LCKHFK NSSQILDIQFGNSSSGLKMIAAFSDGH+KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA C SASISWNPHRGE +Q SFVLAFSS+TPQL
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL ADKGDEVYAVAWAQN+GRPYEVIAVATQKGIAIWRLGL+PDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHA FEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ8 WD_REPEATS_REGION domain-containing protein1.5e-17089.91Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        MEKAMATF KGTLCSAWNYS+ RLAT S+DGTLVIFDSP PSSSSTS TPTSNFKAHE AI +IVWVPPEYGDSVACICSDGT+SL EEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        LCK FKSNSSQILD+QFGNSSSGLKMIAAFSDG++KVYELMDPL+LK+WQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE +QSSFV+AFSS+TPQL
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAH RWLPVAELAL A+KGDEVYAVAWAQN+GRPYEVIAVATQ+GIAIW LGL+PD DGRLS ERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A1S3BTS7 protein SEH13.9e-17492.05Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        MEKAMATFDKGTLCSAWN+S++RLAT S+DGTLVIFDSP PSSSSTSLT TSNFKAHEAAI +IVWVPPEYGDSVACICSDGT+SL EEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        LCK FKSNSSQILD+QFGNSSSGLKMIAAFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE +QSSFVLAFSS+TPQL
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL A+KGDEVYAVAWAQN+GRPYEVIAVATQ+GIAIWRLGL+PDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1C5X6 protein SEH18.7e-17492.05Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        ME AMA+FDKGTLCSAWNYSA+RLAT S DGTLVIFDSPDPSSSSTSLT TSNFKAHEAAI +IVWVPPEYGDSVACICSDGT+SL EEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        LCK FKSNS+Q+LDIQFGNSSSGLKMIAAFS  HVKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKASCLSASISWNPHRGER+QSSFVLA +S+TPQL
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL ADKGDEVYAVAWAQN+GRPYEVIAVATQKGIAIW LG NPD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1FTY0 protein SEH15.4e-17692.35Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWNYSA+RL TGSADGT+VIFDS DPSSSSTSLT TSNFKAHEAAIF+IVWVPPEYGDS+ACICSDG++SL EEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        L KHFKSNSSQI+DIQFGNSSSGLKMIAAFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGER+QSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQN+GRPYEVIAVATQKGIAIWRLGLNPD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1J2X1 protein SEH12.7e-17592.05Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWNYSA+RL TGSADGT+V+FDS DPSSSSTSLT TSNFKAHEAAIF+IVWVPPEYGDS+ACICSDG++SL EEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        L KHFKSNSSQILDIQFGNSSSGLKMIAAFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGER+QSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFD+AHQRWLPVAELAL ADKGD VYAVAWAQN+GRPYEVIAVATQKGIAIWRLGLNPD+DGRLSTERVALLSGHN EVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

SwissProt top hitse value%identityAlignment
C1BK83 Nucleoporin SEH16.4e-3329.3Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWKLCKHFK-----SNSS
        ++++   R+AT S+D ++ ++D  D    +     T+++K H  +++R+ W  PE+G  +A    D T ++ EE+V ++   Q  L    K      + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWKLCKHFK-----SNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQLNSAKV--WEF
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP    R  S  +   S D+    S KV  +E+
Subjt:  QILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQLNSAKV--WEF

Query:  DQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRL-----GLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD
         +  +++  V  L       D V+ +A+A N+GR + V+A+AT K + I++L       +     +L  +  A   GHN +VW + W++    LAS+G D
Subjt:  DQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRL-----GLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q4FZW5 Nucleoporin SEH1-A6.0e-3126.75Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQ-----PLQWKLCKHFKSNSS
        ++++   R+AT S+D ++ ++D     S + +   T+++K H  +++R+ W  PE+G  +A    D T ++ EE+V ++         W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQ-----PLQWKLCKHFKSNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQ-LNSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           +     +P  +   +++E++
Subjt:  QILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQ-LNSAKVWEFD

Query:  QAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWR---LGLNPDTDG---RLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD
        +  +++   A+        D V+ +A+A N+GR + ++AVAT K + I+    L     + G   +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWR---LGLNPDTDG---RLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q6GNF1 Nucleoporin SEH1-B2.7e-3126.75Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQ-----PLQWKLCKHFKSNSS
        ++++   R+AT S+D ++ ++D     S + +   T+++K H  +++R+ W  PE+G  +A    D T ++ EE+V ++         W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQ-----PLQWKLCKHFKSNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQ-LNSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           +     +P  +   +++E++
Subjt:  QILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQ-LNSAKVWEFD

Query:  QAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWR---LGLNPDTDG---RLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD
        +  +++   A+        D V+ +A+A N+GR + ++AVAT K + I+    L     + G   +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWR---LGLNPDTDG---RLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q93VR9 Protein SEH11.1e-12563.38Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        M K+MAT D GT CS+WN S +RLA GS +G L I++S   +SSS++ + TS  +  E++I +IVW+P EYGD+VAC+C DG+ S+ EE+ EDA  L+WK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        LCK  K+ SSQ+LD+QFG S   LKM+AA+SDG+++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K S LSAS+SWNP +GE ++ SFVLAF+SD+P L
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL VAELAL  DKGD VYA++WA N+GRPYEV+AVAT KGI IW +GL PD +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP

Q96EE3 Nucleoporin SEH14.6e-3128.25Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQ-----PLQWKLCKHFKSNSS
        ++++   R+AT S+D ++ ++D     S S     T+++K H  +++R+ W  PE+G  +A    D T ++ EE+V ++         W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQ-----PLQWKLCKHFKSNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQLNSAKV--WEF
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP    R  S  +   S D+     AKV  +E+
Subjt:  QILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQLNSAKV--WEF

Query:  DQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLG------LNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGK
        ++  +++     L       D V+ +A+A N+GR + ++A+AT K + I+ L        +     +     VA    HN +VW + W++ G  LAS+G 
Subjt:  DQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLG------LNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGK

Query:  DGMVRLWQSNLNGVW
        DG VRLW++N    W
Subjt:  DGMVRLWQSNLNGVW

Arabidopsis top hitse value%identityAlignment
AT1G18080.1 Transducin/WD40 repeat-like superfamily protein4.9e-0427.78Show/hide
Query:  LSASISWNPHRGERKQSSFVLAFSSDTPQLNSAKVWEFDQAHQRWLPVAELALAADKGDE-----VYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPD
        L+A +S     G  K    V AFS D  Q+ SA     D+  + W  + E      +G E     V  V ++ N  +P  +++ +  K + +W L     
Subjt:  LSASISWNPHRGERKQSSFVLAFSSDTPQLNSAKVWEFDQAHQRWLPVAELALAADKGDE-----VYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPD

Query:  TDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLW
             + +  + L+GH G V  +     G   AS GKDG+V LW
Subjt:  TDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLW

AT1G64350.1 Transducin/WD40 repeat-like superfamily protein7.8e-12763.38Show/hide
Query:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK
        M K+MAT D GT CS+WN S +RLA GS +G L I++S   +SSS++ + TS  +  E++I +IVW+P EYGD+VAC+C DG+ S+ EE+ EDA  L+WK
Subjt:  MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL
        LCK  K+ SSQ+LD+QFG S   LKM+AA+SDG+++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K S LSAS+SWNP +GE ++ SFVLAF+SD+P L
Subjt:  LCKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL VAELAL  DKGD VYA++WA N+GRPYEV+AVAT KGI IW +GL PD +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCTATGGCGACCTTCGACAAAGGCACGCTCTGTTCAGCTTGGAACTACTCCGCCAACAGATTAGCCACCGGTTCCGCCGACGGAACGCTCGTCATCTTCGA
TTCTCCCGACCCTTCTTCCTCATCGACGTCCTTAACTCCCACTTCAAACTTCAAGGCACATGAGGCTGCAATTTTTAGGATTGTTTGGGTCCCTCCGGAGTATGGTGATT
CTGTTGCGTGCATTTGTTCAGATGGAACTACCTCATTGTTGGAGGAGGTTGTCGAAGATGCCCAGCCTCTGCAGTGGAAGCTATGCAAACACTTTAAAAGTAATTCATCT
CAAATCCTAGACATCCAGTTTGGAAATTCCTCCTCCGGCCTGAAAATGATTGCTGCATTTTCAGATGGTCATGTAAAAGTTTATGAACTTATGGATCCTTTGGATTTGAA
GAGTTGGCAACTTCAGGCTGAATTTCAGAATGTCATCGATTCCATTTCTACAGTCAGGAAAGCATCTTGCTTGTCTGCTAGTATATCTTGGAACCCACATCGAGGCGAAA
GAAAGCAATCGAGCTTTGTTTTGGCTTTTAGTTCGGATACACCACAGCTTAATTCCGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAG
TTGGCTTTGGCTGCAGACAAAGGTGATGAGGTCTATGCTGTTGCGTGGGCACAAAATGTTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAAT
TTGGCGCCTTGGATTGAACCCGGACACAGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTG
GTATGACATTGGCATCAACAGGAAAGGACGGGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TCCAAATAAACAAAATATAAAAAAAAAACAAAATATGGATTGAAATTGAAATAGAAAACTCAAAAAAGAAAAAGAAAAAAAAAGATATCGAAATATGTTTTTCATTTTTC
TCATTTTCAAAAAGTTGTAAGAAACACAGTGCCCCACAAAACCCCGAAATCAAAGGGCTGAAGACTTGTAGCAGGCGAACGCGCGAACAAGAAATTGAGAGTTGAGATGG
AGAAGGCTATGGCGACCTTCGACAAAGGCACGCTCTGTTCAGCTTGGAACTACTCCGCCAACAGATTAGCCACCGGTTCCGCCGACGGAACGCTCGTCATCTTCGATTCT
CCCGACCCTTCTTCCTCATCGACGTCCTTAACTCCCACTTCAAACTTCAAGGCACATGAGGCTGCAATTTTTAGGATTGTTTGGGTCCCTCCGGAGTATGGTGATTCTGT
TGCGTGCATTTGTTCAGATGGAACTACCTCATTGTTGGAGGAGGTTGTCGAAGATGCCCAGCCTCTGCAGTGGAAGCTATGCAAACACTTTAAAAGTAATTCATCTCAAA
TCCTAGACATCCAGTTTGGAAATTCCTCCTCCGGCCTGAAAATGATTGCTGCATTTTCAGATGGTCATGTAAAAGTTTATGAACTTATGGATCCTTTGGATTTGAAGAGT
TGGCAACTTCAGGCTGAATTTCAGAATGTCATCGATTCCATTTCTACAGTCAGGAAAGCATCTTGCTTGTCTGCTAGTATATCTTGGAACCCACATCGAGGCGAAAGAAA
GCAATCGAGCTTTGTTTTGGCTTTTAGTTCGGATACACCACAGCTTAATTCCGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGG
CTTTGGCTGCAGACAAAGGTGATGAGGTCTATGCTGTTGCGTGGGCACAAAATGTTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATTTGG
CGCCTTGGATTGAACCCGGACACAGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTGGTAT
GACATTGGCATCAACAGGAAAGGACGGGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAACCTTGAAAAT
CGTTTTGTTTATCTATGATGTAACCACTTCCTGTATTCATTATAAGGAAGAATTTTCAAATAATATTATTTATCATTCTGAGTGGGGTGCTAATATTAGGGATGTCTTAT
TGGAGACCATTCGAGAAGATCAAATGTCATTGAAGCCTTTATTTA
Protein sequenceShow/hide protein sequence
MEKAMATFDKGTLCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTPTSNFKAHEAAIFRIVWVPPEYGDSVACICSDGTTSLLEEVVEDAQPLQWKLCKHFKSNSS
QILDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERKQSSFVLAFSSDTPQLNSAKVWEFDQAHQRWLPVAE
LALAADKGDEVYAVAWAQNVGRPYEVIAVATQKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS