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Tan0021298 (gene) of Snake gourd v1 genome

Gene IDTan0021298
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR2-like
Genome locationLG03:66032011..66032481
RNA-Seq ExpressionTan0021298
SyntenyTan0021298
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595321.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia]5.5e-4873.68Show/hide
Query:  MASEFQEISLTPESFRVKLEDANQIQFIFALNNPPLASDSQHQGRDSDSIHRADRSAPSAD-SISAVDDDDHDGFRTPTSSDYKIPVVKQCPPAPRRPKP
        MAS+F+EISLTPESFRVKLEDA+QI+FIFA+ N PL S+SQ          R D SAP     ISAVDD+  DG RTPTSSDYKIP+V+ CPPAPRRPKP
Subjt:  MASEFQEISLTPESFRVKLEDANQIQFIFALNNPPLASDSQHQGRDSDSIHRADRSAPSAD-SISAVDDDDHDGFRTPTSSDYKIPVVKQCPPAPRRPKP

Query:  ISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHG
        +SLSRTSPRVSGVRRGFRVYISDEIV+SIFSSSFGSD    KNKK+RKDDHG
Subjt:  ISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHG

KAG6603657.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3664.07Show/hide
Query:  MASEFQEIS------------LTPESFRVKLEDA-NQIQFIFALN-NPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPV
        MAS FQEIS             TP+SFRV L DA NQI FIFALN +PPLASDS             DRSAP  DSIS    DD DGFRTPTSSD+KIPV
Subjt:  MASEFQEIS------------LTPESFRVKLEDA-NQIQFIFALN-NPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPV

Query:  VKQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGE
        V+QCPPAPRRPKPIS SRT PR SGVRRGFRVYISDEI +SIF      D  HQK KKARK+ +GGE
Subjt:  VKQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGE

XP_022143885.1 cyclin-dependent protein kinase inhibitor SMR2-like [Momordica charantia]4.3e-3258.93Show/hide
Query:  MASEFQEISL-----------TPESFRVKLEDA-NQIQFIFALNNPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPVVK
        MAS FQEISL           +PESF + LEDA NQI F+FALN       +Q Q R  DSI                   D DGFRTPTSSD+KIPV+K
Subjt:  MASEFQEISL-----------TPESFRVKLEDA-NQIQFIFALNNPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPVVK

Query:  QCPPAPRRPKPISL--SRTSPRV-SGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGE
        QCPPAPRRPKPIS    R+SPR+ SGVRRGFRVYISDEIVESIFSSSF     HQK KKAR+DDH  E
Subjt:  QCPPAPRRPKPISL--SRTSPRV-SGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGE

XP_022950456.1 uncharacterized protein LOC111453550 [Cucurbita moschata]1.7e-3664.07Show/hide
Query:  MASEFQEIS------------LTPESFRVKLEDA-NQIQFIFALN-NPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPV
        MAS FQEIS             TP+SFRV L DA NQI FIFALN +PPLASDS             DRSAP  DSIS    DD DGFRTPTSSD+KIPV
Subjt:  MASEFQEIS------------LTPESFRVKLEDA-NQIQFIFALN-NPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPV

Query:  VKQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGE
        V+QCPPAPRRPKPIS SRT PR SGVRRGFRVYISDEI +SIF      D  HQK KKARK+ +GGE
Subjt:  VKQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGE

XP_023518540.1 uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo]2.4e-5175.16Show/hide
Query:  MASEFQEISLTPESFRVKLEDANQIQFIFALNNPPLASDSQHQGRDSDSIHRADRSAPSAD-SISAVDDDDHDGFRTPTSSDYKIPVVKQCPPAPRRPKP
        MAS+F+EISLTPESFRVKLEDA+QI+FIFA+ N PLA +SQ          R D SAP     ISAVDD+  DGFRTPTSSDYKIP+V+ CPPAPRRPKP
Subjt:  MASEFQEISLTPESFRVKLEDANQIQFIFALNNPPLASDSQHQGRDSDSIHRADRSAPSAD-SISAVDDDDHDGFRTPTSSDYKIPVVKQCPPAPRRPKP

Query:  ISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGEVKL
        ISLSRTSPRVSGVRRGFRVYISDEIV+SIFSSSFGSD    KNKKARKDDHGG++KL
Subjt:  ISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGEVKL

TrEMBL top hitse value%identityAlignment
A0A0A0KZJ9 Uncharacterized protein1.6e-2453.94Show/hide
Query:  MASEFQEISLTP---ESFRVKLEDANQIQFIF----ALNNPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDD--HDGFRTPTSSDYKIPVVKQCP
        MASEFQEIS  P      ++ L   + I F+F    +++ PP             S  R+ +  P   SISAVDDDD  +DGF TP SS +KIPV+  CP
Subjt:  MASEFQEISLTP---ESFRVKLEDANQIQFIF----ALNNPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDD--HDGFRTPTSSDYKIPVVKQCP

Query:  PAPRRPKPISLSRT-SPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKN-KKARK-DDHGGE
        PAP RPKPISLSRT SPR SGVRRGF VYISD+IV+SIFS     D  HQK+ KKARK DD+GGE
Subjt:  PAPRRPKPISLSRT-SPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKN-KKARK-DDHGGE

A0A5A7SN91 Cyclin-dependent protein kinase inhibitor SMR3-like3.0e-2350Show/hide
Query:  MASEFQEISLTP----ESFRVKLEDANQIQFIF-----ALNNPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDH--DGFRTPTSSDYKIPVVKQ
        M SEFQEIS  P       ++ L   + I F+F     ++  PP         +D   +           SISAVDDD+   DGF TP SS +KIPV+  
Subjt:  MASEFQEISLTP----ESFRVKLEDANQIQFIF-----ALNNPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDH--DGFRTPTSSDYKIPVVKQ

Query:  CPPAPRRPKPISLSRT-SPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARK-DDHGGE
        CPPAP RPKPISLSRT S R S VRRGF VYISDEIV+SIFS     D  H K+KKARK DD+GGE
Subjt:  CPPAPRRPKPISLSRT-SPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARK-DDHGGE

A0A5D2MEF8 Uncharacterized protein5.3e-1252.22Show/hide
Query:  AVDDDDHDGFRTPTSSDYKIPVVKQCPPAPRRPKPISLSR----TSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDH
        A DD D DGF+TPTS D+KIPV+KQCPPAPR+PKP+S ++    + P  SG R   ++  + E VES+F S   +D+ H+K KKARK+D+
Subjt:  AVDDDDHDGFRTPTSSDYKIPVVKQCPPAPRRPKPISLSR----TSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDH

A0A6J1CQ22 cyclin-dependent protein kinase inhibitor SMR2-like2.1e-3258.93Show/hide
Query:  MASEFQEISL-----------TPESFRVKLEDA-NQIQFIFALNNPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPVVK
        MAS FQEISL           +PESF + LEDA NQI F+FALN       +Q Q R  DSI                   D DGFRTPTSSD+KIPV+K
Subjt:  MASEFQEISL-----------TPESFRVKLEDA-NQIQFIFALNNPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPVVK

Query:  QCPPAPRRPKPISL--SRTSPRV-SGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGE
        QCPPAPRRPKPIS    R+SPR+ SGVRRGFRVYISDEIVESIFSSSF     HQK KKAR+DDH  E
Subjt:  QCPPAPRRPKPISL--SRTSPRV-SGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGE

A0A6J1GEW0 uncharacterized protein LOC1114535508.1e-3764.07Show/hide
Query:  MASEFQEIS------------LTPESFRVKLEDA-NQIQFIFALN-NPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPV
        MAS FQEIS             TP+SFRV L DA NQI FIFALN +PPLASDS             DRSAP  DSIS    DD DGFRTPTSSD+KIPV
Subjt:  MASEFQEIS------------LTPESFRVKLEDA-NQIQFIFALN-NPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPV

Query:  VKQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGE
        V+QCPPAPRRPKPIS SRT PR SGVRRGFRVYISDEI +SIF      D  HQK KKARK+ +GGE
Subjt:  VKQCPPAPRRPKPISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGE

SwissProt top hitse value%identityAlignment
Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR32.3e-0452.17Show/hide
Query:  DDHDGFRTPTSSDYKIPVVKQ--CPPAPRRPKPISLSRTSPRVSGV
        ++ +G +TPTSSD+KIP VK   CPPAPR+PKP   S T  +++ V
Subjt:  DDHDGFRTPTSSDYKIPVVKQ--CPPAPRRPKPISLSRTSPRVSGV

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein2.4e-0437.84Show/hide
Query:  TPTSSDYKIPVVKQCPPAPR-RPKPISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKD
        TPTSSD+KIP V+ CPP PR RP+ ISL++ +     +R      +  + VE++F        P+   KK R +
Subjt:  TPTSSDYKIPVVKQCPPAPR-RPKPISLSRTSPRVSGVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKD

AT5G02420.1 unknown protein1.6e-0552.17Show/hide
Query:  DDHDGFRTPTSSDYKIPVVKQ--CPPAPRRPKPISLSRTSPRVSGV
        ++ +G +TPTSSD+KIP VK   CPPAPR+PKP   S T  +++ V
Subjt:  DDHDGFRTPTSSDYKIPVVKQ--CPPAPRRPKPISLSRTSPRVSGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAGAATTCCAAGAAATCTCCCTCACGCCAGAATCATTCCGCGTCAAATTGGAGGATGCGAACCAGATCCAGTTCATTTTCGCTCTAAACAATCCTCCTCTCGC
CTCGGATTCTCAACATCAAGGCCGCGATTCCGATTCCATCCACCGAGCCGATCGCTCCGCTCCATCAGCAGACTCGATCTCCGCCGTGGATGACGACGATCATGACGGTT
TCAGAACGCCGACCTCTTCGGATTATAAGATTCCGGTGGTGAAACAGTGTCCGCCGGCGCCTAGAAGACCGAAACCGATCTCGTTGTCAAGAACGTCGCCGAGAGTTTCC
GGCGTTCGTAGAGGTTTCAGAGTCTATATCTCGGACGAAATCGTTGAATCGATATTTTCGTCCAGTTTCGGCTCCGATTCTCCGCACCAGAAGAACAAGAAAGCTCGGAA
GGACGATCATGGAGGTGAAGTGAAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAGAATTCCAAGAAATCTCCCTCACGCCAGAATCATTCCGCGTCAAATTGGAGGATGCGAACCAGATCCAGTTCATTTTCGCTCTAAACAATCCTCCTCTCGC
CTCGGATTCTCAACATCAAGGCCGCGATTCCGATTCCATCCACCGAGCCGATCGCTCCGCTCCATCAGCAGACTCGATCTCCGCCGTGGATGACGACGATCATGACGGTT
TCAGAACGCCGACCTCTTCGGATTATAAGATTCCGGTGGTGAAACAGTGTCCGCCGGCGCCTAGAAGACCGAAACCGATCTCGTTGTCAAGAACGTCGCCGAGAGTTTCC
GGCGTTCGTAGAGGTTTCAGAGTCTATATCTCGGACGAAATCGTTGAATCGATATTTTCGTCCAGTTTCGGCTCCGATTCTCCGCACCAGAAGAACAAGAAAGCTCGGAA
GGACGATCATGGAGGTGAAGTGAAATTATGA
Protein sequenceShow/hide protein sequence
MASEFQEISLTPESFRVKLEDANQIQFIFALNNPPLASDSQHQGRDSDSIHRADRSAPSADSISAVDDDDHDGFRTPTSSDYKIPVVKQCPPAPRRPKPISLSRTSPRVS
GVRRGFRVYISDEIVESIFSSSFGSDSPHQKNKKARKDDHGGEVKL