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Tan0021321 (gene) of Snake gourd v1 genome

Gene IDTan0021321
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG02:2069598..2070620
RNA-Seq ExpressionTan0021321
SyntenyTan0021321
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031583.1 protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo var. makuwa]4.0e-2874.16Show/hide
Query:  GHQHKAAATS------IKDDKVAAW---RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        GH  K AA+S      + ++KV      RKG +TVEVAGSSLPDCSHACGSCSPC+LVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
Subjt:  GHQHKAAATS------IKDDKVAAW---RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

XP_008455333.1 PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]4.0e-2874.16Show/hide
Query:  GHQHKAAATS------IKDDKVAAW---RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        GH  K AA+S      + ++KV      RKG +TVEVAGSSLPDCSHACGSCSPC+LVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
Subjt:  GHQHKAAATS------IKDDKVAAW---RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

XP_022930814.1 uncharacterized protein LOC111437184 [Cucurbita moschata]6.8e-2868.04Show/hide
Query:  RGHQHKAAATSIKDDKVAA----W------------RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        RGH HKAA  S++  + A     W            RKG +TVEVAGSSLPDCSHACGSCSPC+LVMISFVCA+L EAETCPMAYRCMCNNKSYPVP
Subjt:  RGHQHKAAATSIKDDKVAA----W------------RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

XP_022989012.1 protein EPIDERMAL PATTERNING FACTOR 1 [Cucurbita maxima]4.3e-3074.16Show/hide
Query:  RGHQHKAAATSIKDDKV--------AAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        RGH HKAA  S++  +         A WRKG +TVEVAGSSLPDCSHACGSCSPC+LVMISFVCA+L EAETCPMAYRCMCNNKSYPVP
Subjt:  RGHQHKAAATSIKDDKV--------AAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

XP_038888568.1 protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]1.2e-2975.58Show/hide
Query:  GHQHKAAATSIK------DDKVAAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        GH  K A T++K      + K    RKG DTVEVAGSSLPDCSHACGSCSPC+LVMISFVCASLQEAETCPMAYRCMCNNKSYP+P
Subjt:  GHQHKAAATSIK------DDKVAAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

TrEMBL top hitse value%identityAlignment
A0A0A0K5P8 Epidermal patterning factor-like protein5.6e-2872.53Show/hide
Query:  GHQHKAAATS-------IKDDKVAAW----RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        GH  K AA+S       +  +K A      RKG +TVEVAGSSLPDCSHACGSCSPC+LVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
Subjt:  GHQHKAAATS-------IKDDKVAAW----RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

A0A1S3C0N9 Epidermal patterning factor-like protein1.9e-2874.16Show/hide
Query:  GHQHKAAATS------IKDDKVAAW---RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        GH  K AA+S      + ++KV      RKG +TVEVAGSSLPDCSHACGSCSPC+LVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
Subjt:  GHQHKAAATS------IKDDKVAAW---RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

A0A5A7SMZ1 Epidermal patterning factor-like protein1.9e-2874.16Show/hide
Query:  GHQHKAAATS------IKDDKVAAW---RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        GH  K AA+S      + ++KV      RKG +TVEVAGSSLPDCSHACGSCSPC+LVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
Subjt:  GHQHKAAATS------IKDDKVAAW---RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

A0A6J1ESJ9 Epidermal patterning factor-like protein3.3e-2868.04Show/hide
Query:  RGHQHKAAATSIKDDKVAA----W------------RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        RGH HKAA  S++  + A     W            RKG +TVEVAGSSLPDCSHACGSCSPC+LVMISFVCA+L EAETCPMAYRCMCNNKSYPVP
Subjt:  RGHQHKAAATSIKDDKVAA----W------------RKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

A0A6J1JEL1 Epidermal patterning factor-like protein2.1e-3074.16Show/hide
Query:  RGHQHKAAATSIKDDKV--------AAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        RGH HKAA  S++  +         A WRKG +TVEVAGSSLPDCSHACGSCSPC+LVMISFVCA+L EAETCPMAYRCMCNNKSYPVP
Subjt:  RGHQHKAAATSIKDDKV--------AAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

SwissProt top hitse value%identityAlignment
C4B8C5 EPIDERMAL PATTERNING FACTOR-like protein 71.6e-1153.7Show/hide
Query:  EVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        + +GSS+PDCS+ACG C PCKLV+IS  C++   +E CP+ Y+C+C  K Y VP
Subjt:  EVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.1e-0447.92Show/hide
Query:  GSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSY
        GSS P CS  CG C+PCK V +     +   AE  P A+RC C NK Y
Subjt:  GSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSY

Q8LC53 Protein EPIDERMAL PATTERNING FACTOR 21.6e-1162.75Show/hide
Query:  GSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        GSSLPDCS+ACG+CSPCK VMISF C+    AE+C + YRC C  + Y VP
Subjt:  GSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

Q8S8I4 Protein EPIDERMAL PATTERNING FACTOR 11.7e-2668.35Show/hide
Query:  HQHKAAATSIKDDKVAAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        H H     ++K       R+  DTV+VAGS LPDCSHACGSCSPC+LVM+SFVCAS++EAETCPMAY+CMCNNKSYPVP
Subjt:  HQHKAAATSIKDDKVAAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

Arabidopsis top hitse value%identityAlignment
AT1G34245.1 Putative membrane lipoprotein1.1e-1262.75Show/hide
Query:  GSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        GSSLPDCS+ACG+CSPCK VMISF C+    AE+C + YRC C  + Y VP
Subjt:  GSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

AT1G71866.1 LOCATED IN: endomembrane system1.1e-1253.7Show/hide
Query:  EVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        + +GSS+PDCS+ACG C PCKLV+IS  C++   +E CP+ Y+C+C  K Y VP
Subjt:  EVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

AT2G20875.1 epidermal patterning factor 11.2e-2768.35Show/hide
Query:  HQHKAAATSIKDDKVAAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP
        H H     ++K       R+  DTV+VAGS LPDCSHACGSCSPC+LVM+SFVCAS++EAETCPMAY+CMCNNKSYPVP
Subjt:  HQHKAAATSIKDDKVAAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

AT2G30370.1 allergen-related7.8e-0647.92Show/hide
Query:  GSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSY
        GSS P CS  CG C+PCK V +     +   AE  P A+RC C NK Y
Subjt:  GSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSY

AT2G30370.2 allergen-related7.8e-0647.92Show/hide
Query:  GSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSY
        GSS P CS  CG C+PCK V +     +   AE  P A+RC C NK Y
Subjt:  GSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTTTTGTCTTCCTTCTTCTTTTTGTGGTGTTGTGTTTTTTTTTGTCGTGGCCACCAGCACAAGGCAGCAGCTACCTCAATCAAAGACGACAAGGTGGCGGCATG
GAGAAAAGGCCTGGACACAGTTGAAGTAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCGCCGTGCAAACTGGTGATGATAAGCTTTGTTTGTG
CTTCACTTCAAGAGGCAGAAACATGTCCAATGGCTTACCGATGCATGTGTAATAACAAGTCCTATCCTGTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTTTTTGTCTTCCTTCTTCTTTTTGTGGTGTTGTGTTTTTTTTTGTCGTGGCCACCAGCACAAGGCAGCAGCTACCTCAATCAAAGACGACAAGGTGGCGGCATG
GAGAAAAGGCCTGGACACAGTTGAAGTAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCGCCGTGCAAACTGGTGATGATAAGCTTTGTTTGTG
CTTCACTTCAAGAGGCAGAAACATGTCCAATGGCTTACCGATGCATGTGTAATAACAAGTCCTATCCTGTTCCTTGA
Protein sequenceShow/hide protein sequence
MIFLSSFFFLWCCVFFCRGHQHKAAATSIKDDKVAAWRKGLDTVEVAGSSLPDCSHACGSCSPCKLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP