; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0021329 (gene) of Snake gourd v1 genome

Gene IDTan0021329
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMediator of RNA polymerase II transcription subunit 20
Genome locationLG08:441980..443811
RNA-Seq ExpressionTan0021329
SyntenyTan0021329
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR013921 - Mediator complex, subunit Med20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061469.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucumis melo var. makuwa]4.4e-11593.27Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN  AA+FPRDFLGISLPEQPNKYYLIIRGQRIVLEADF+IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSD+YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQAVRN
        AVQY NVMAQLIATVQAVQ+ RN
Subjt:  AVQYANVMAQLIATVQAVQAVRN

XP_004141069.1 mediator of RNA polymerase II transcription subunit 20a [Cucumis sativus]1.4e-11695.07Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN  AA+FPRDFLGISLPEQPNKYYLIIRGQRIVLEADF+IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVMEIEYLPISSMEKSRQVMEEFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQAVRN
        AVQY NVMAQLIATVQAVQ+ RN
Subjt:  AVQYANVMAQLIATVQAVQAVRN

XP_008459711.1 PREDICTED: mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucumis melo]4.4e-11593.27Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN  AA+FPRDFLGISLPEQPNKYYLIIRGQRIVLEADF+IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSD+YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQAVRN
        AVQY NVMAQLIATVQAVQ+ RN
Subjt:  AVQYANVMAQLIATVQAVQAVRN

XP_022946745.1 mediator of RNA polymerase II transcription subunit 20a-like [Cucurbita moschata]6.1e-11794.62Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A +FPRDFLGIS+PEQPNKYYLIIRGQRIVLEADF+IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVMEIEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQAVRN
        AVQYANVMAQLIATVQAVQ+ RN
Subjt:  AVQYANVMAQLIATVQAVQAVRN

XP_038889134.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Benincasa hispida]1.5e-11896.41Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNL AA+FPRDFLGISLPEQPNKYYLIIRGQRIVLEADF+IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVMEIEYLPISSMEKSR+VMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQAVRN
        AVQYANVMAQLIATVQAVQ+ RN
Subjt:  AVQYANVMAQLIATVQAVQAVRN

TrEMBL top hitse value%identityAlignment
A0A0A0LHQ1 Mediator of RNA polymerase II transcription subunit 206.6e-11795.07Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN  AA+FPRDFLGISLPEQPNKYYLIIRGQRIVLEADF+IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVMEIEYLPISSMEKSRQVMEEFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQAVRN
        AVQY NVMAQLIATVQAVQ+ RN
Subjt:  AVQYANVMAQLIATVQAVQAVRN

A0A1S3CAW6 Mediator of RNA polymerase II transcription subunit 202.1e-11593.27Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN  AA+FPRDFLGISLPEQPNKYYLIIRGQRIVLEADF+IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSD+YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQAVRN
        AVQY NVMAQLIATVQAVQ+ RN
Subjt:  AVQYANVMAQLIATVQAVQAVRN

A0A5D3CH02 Mediator of RNA polymerase II transcription subunit 202.1e-11593.27Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQN  AA+FPRDFLGISLPEQPNKYYLIIRGQRIVLEADF+IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVMEIEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRFMHIE NFAEYGLSD+YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQAVRN
        AVQY NVMAQLIATVQAVQ+ RN
Subjt:  AVQYANVMAQLIATVQAVQAVRN

A0A6J1G4U3 Mediator of RNA polymerase II transcription subunit 203.0e-11794.62Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A +FPRDFLGIS+PEQPNKYYLIIRGQRIVLEADF+IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVMEIEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQAVRN
        AVQYANVMAQLIATVQAVQ+ RN
Subjt:  AVQYANVMAQLIATVQAVQAVRN

A0A6J1KEU1 Mediator of RNA polymerase II transcription subunit 203.0e-11794.62Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRD N+ A +FPRDFLGIS+PEQPNKYYLIIRGQRIVLEADF+IQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVMEIEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQAVRN
        AVQYANVMAQLIATVQAVQ+ RN
Subjt:  AVQYANVMAQLIATVQAVQAVRN

SwissProt top hitse value%identityAlignment
Q54FL3 Putative mediator of RNA polymerase II transcription subunit 202.6e-0928.43Show/hide
Query:  LNEVSQCVESIHGVKGGKWKATLTFYKPILRD-QNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEKLQSYKLRVALNFEGFQYQLG
        L E+++ +E + G+K        + Y   + D  NL     PR+F  +   E+P K + + R    ++E D  + +I+EK  SYK R        +Y+LG
Subjt:  LNEVSQCVESIHGVKGGKWKATLTFYKPILRD-QNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEKLQSYKLRVALNFEGFQYQLG

Query:  DFQLRVGKVVPNHSENLRGIVMEIEY----LPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDY------YTSQHTAVQYANV
        DF +RVG +V      +RGI++E+EY     P++S     +++ EF          +   G F   EP    +  S Y      Y+  HT+ QY N+
Subjt:  DFQLRVGKVVPNHSENLRGIVMEIEY----LPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDY------YTSQHTAVQYANV

Q6NPF4 Mediator of RNA polymerase II transcription subunit 20a7.1e-9274.89Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MP+KWVLHWQPN GSTV+SQILNE +QCVESI+GVK G+WKATL +YKP+L+DQ  Q  +FPRDFLGISL +QPNKYY IIR QRIVLEAD SIQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +VAL F+GFQYQLGDF+LRVGKVVP HSEN+RGIVME+EYLPISSMEK+++VMEEF E+W EA++K SLPG+F++I+ NF E+GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQ
        AV+YA VMA +IATVQAV+
Subjt:  AVQYANVMAQLIATVQAVQ

Q9M0S0 Mediator of RNA polymerase II transcription subunit 20b3.9e-8266.36Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MP+KW+LHWQPN GST +SQILNEV+Q +ES++GVK G WKATL +YKP+L+DQ  Q A+FPR+F+GISLPE+P+KYY +IR QRIV+EAD SIQ IME 
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +++  FEG +YQLGDF+LRVGKVVP H+E +RG+VME+EYLPISSM  ++++MEEF E+WQEAMSK SLPG+F++ E NF ++GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQA
        AV YA  MA L+A +QA
Subjt:  AVQYANVMAQLIATVQA

Arabidopsis top hitse value%identityAlignment
AT2G28020.1 BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT2G28230.1)2.9e-1663.24Show/hide
Query:  MEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQ-YANVMAQLIATVQAV
        ME +R+VMEEF E+W EA++K SLPG+F++ + NF E+GL D YT QHTAV+ YA VMA +IATVQAV
Subjt:  MEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQ-YANVMAQLIATVQAV

AT2G28230.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex5.1e-9374.89Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MP+KWVLHWQPN GSTV+SQILNE +QCVESI+GVK G+WKATL +YKP+L+DQ  Q  +FPRDFLGISL +QPNKYY IIR QRIVLEAD SIQ IMEK
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +VAL F+GFQYQLGDF+LRVGKVVP HSEN+RGIVME+EYLPISSMEK+++VMEEF E+W EA++K SLPG+F++I+ NF E+GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQAVQ
        AV+YA VMA +IATVQAV+
Subjt:  AVQYANVMAQLIATVQAVQ

AT4G09070.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex2.8e-8366.36Show/hide
Query:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK
        MP+KW+LHWQPN GST +SQILNEV+Q +ES++GVK G WKATL +YKP+L+DQ  Q A+FPR+F+GISLPE+P+KYY +IR QRIV+EAD SIQ IME 
Subjt:  MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEK

Query:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT
        LQSYK +++  FEG +YQLGDF+LRVGKVVP H+E +RG+VME+EYLPISSM  ++++MEEF E+WQEAMSK SLPG+F++ E NF ++GL D YT QHT
Subjt:  LQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHT

Query:  AVQYANVMAQLIATVQA
        AV YA  MA L+A +QA
Subjt:  AVQYANVMAQLIATVQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCTGAAATGGGTTTTGCATTGGCAACCGAATGCCGGCAGCACTGTTAACAGTCAGATCCTCAACGAAGTTTCCCAATGTGTTGAGAGTATCCATGGCGTTAAAGG
GGGCAAGTGGAAAGCTACCCTCACTTTCTACAAACCCATCTTACGAGACCAGAACTTACAGGCGGCCGACTTCCCGCGCGACTTTCTCGGAATTTCGCTGCCGGAGCAAC
CAAACAAGTATTATCTTATAATTCGTGGCCAACGGATCGTCTTGGAAGCTGATTTTTCGATTCAGACTATAATGGAGAAGCTGCAGTCTTACAAATTGCGCGTTGCTCTC
AATTTCGAGGGGTTCCAATACCAATTAGGGGATTTCCAACTGAGAGTGGGAAAAGTTGTTCCTAATCATTCTGAGAATTTGAGAGGAATAGTGATGGAGATTGAGTATCT
CCCAATTTCATCAATGGAGAAATCAAGACAGGTGATGGAGGAGTTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCACTTCCAGGTCGTTTCATGCACATAGAAC
CAAACTTTGCTGAATATGGACTGTCCGATTACTACACTTCTCAACACACTGCGGTTCAGTATGCCAATGTCATGGCTCAGCTAATCGCTACTGTGCAAGCAGTTCAAGCA
GTGAGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGCTGAAATGGGTTTTGCATTGGCAACCGAATGCCGGCAGCACTGTTAACAGTCAGATCCTCAACGAAGTTTCCCAATGTGTTGAGAGTATCCATGGCGTTAAAGG
GGGCAAGTGGAAAGCTACCCTCACTTTCTACAAACCCATCTTACGAGACCAGAACTTACAGGCGGCCGACTTCCCGCGCGACTTTCTCGGAATTTCGCTGCCGGAGCAAC
CAAACAAGTATTATCTTATAATTCGTGGCCAACGGATCGTCTTGGAAGCTGATTTTTCGATTCAGACTATAATGGAGAAGCTGCAGTCTTACAAATTGCGCGTTGCTCTC
AATTTCGAGGGGTTCCAATACCAATTAGGGGATTTCCAACTGAGAGTGGGAAAAGTTGTTCCTAATCATTCTGAGAATTTGAGAGGAATAGTGATGGAGATTGAGTATCT
CCCAATTTCATCAATGGAGAAATCAAGACAGGTGATGGAGGAGTTCTTCGAGGTATGGCAAGAAGCCATGTCAAAAAGTTCACTTCCAGGTCGTTTCATGCACATAGAAC
CAAACTTTGCTGAATATGGACTGTCCGATTACTACACTTCTCAACACACTGCGGTTCAGTATGCCAATGTCATGGCTCAGCTAATCGCTACTGTGCAAGCAGTTCAAGCA
GTGAGAAATTAG
Protein sequenceShow/hide protein sequence
MPLKWVLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNLQAADFPRDFLGISLPEQPNKYYLIIRGQRIVLEADFSIQTIMEKLQSYKLRVAL
NFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFMHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQA
VRN