| GenBank top hits | e value | %identity | Alignment |
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| KAA0056761.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.8e-41 | 52.85 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV---------------------------------------------------------
MSIK S K+LPDLSKLEPLDG NY RWSQKLLIFFEQ EVDYV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV---------------------------------------------------------
Query: ---------------------IWSTLKSRYSGDDAGRKKYVVGKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
IWSTL+SRY GDDAGRKKYVVGKWLQFQM DDKPV++Q+HEYENLVANVLSEGMKMCEILQA+VLLEKFPPS
Subjt: ---------------------IWSTLKSRYSGDDAGRKKYVVGKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
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| KAA0058501.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 8.7e-43 | 66.22 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYVI---------------------------------WSTLKSRYSGDDAGRKKYVVGKW
MSIK S K+L DLSKLEPLDG NY RWSQKLLIFFEQ EVDYV+ STL+SRY GDDAGRKKYVVGKW
Subjt: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYVI---------------------------------WSTLKSRYSGDDAGRKKYVVGKW
Query: LQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
LQFQM D KPV++Q+HEYENLVANVLSEGMKMCEILQA+VLLEKFPPS
Subjt: LQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
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| TYK02676.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.3e-41 | 53.37 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV---------------------------------------------------------
MSIK S K+LPDLSKLEPLDG NY RWSQKLLIFFEQ EVDYV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV---------------------------------------------------------
Query: ---------------------IWSTLKSRYSGDDAGRKKYVVGKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
IWSTLKSRY GDDAGRKKYVVGKWLQFQM DDKPV++Q+HEYENLVANVLSEGMKMCEILQA+VLLEKFPPS
Subjt: ---------------------IWSTLKSRYSGDDAGRKKYVVGKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
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| TYK07244.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 8.7e-43 | 66.22 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYVI---------------------------------WSTLKSRYSGDDAGRKKYVVGKW
MSIK S K+L DLSKLEPLDG NY RWSQKLLIFFEQ EVDYV+ STL+SRY GDDAGRKKYVVGKW
Subjt: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYVI---------------------------------WSTLKSRYSGDDAGRKKYVVGKW
Query: LQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
LQFQM D KPV++Q+HEYENLVANVLSEGMKMCEILQA+VLLEKFPPS
Subjt: LQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
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| TYK30642.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.2e-41 | 64.24 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV------------------------------------IWSTLKSRYSGDDAGRKKYVV
MSIK S K+LPDLSKLEPLDG NY RWS+KLLIFFEQ E DYV IWSTL+SRY GDDAGRKKYVV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV------------------------------------IWSTLKSRYSGDDAGRKKYVV
Query: GKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
GKWLQF+M DDKPV++Q+HEYENLVANVLSEGMKMC+ILQA+VLLEKFP S
Subjt: GKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UYD5 Ty1-copia retrotransposon protein | 4.2e-43 | 66.22 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYVI---------------------------------WSTLKSRYSGDDAGRKKYVVGKW
MSIK S K+L DLSKLEPLDG NY RWSQKLLIFFEQ EVDYV+ STL+SRY GDDAGRKKYVVGKW
Subjt: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYVI---------------------------------WSTLKSRYSGDDAGRKKYVVGKW
Query: LQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
LQFQM D KPV++Q+HEYENLVANVLSEGMKMCEILQA+VLLEKFPPS
Subjt: LQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
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| A0A5D3BWR7 Ty1-copia retrotransposon protein | 6.1e-42 | 53.37 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV---------------------------------------------------------
MSIK S K+LPDLSKLEPLDG NY RWSQKLLIFFEQ EVDYV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV---------------------------------------------------------
Query: ---------------------IWSTLKSRYSGDDAGRKKYVVGKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
IWSTLKSRY GDDAGRKKYVVGKWLQFQM DDKPV++Q+HEYENLVANVLSEGMKMCEILQA+VLLEKFPPS
Subjt: ---------------------IWSTLKSRYSGDDAGRKKYVVGKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 1.4e-41 | 52.85 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV---------------------------------------------------------
MSIK S K+LPDLSKLEPLDG NY RWSQKLLIFFEQ EVDYV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV---------------------------------------------------------
Query: ---------------------IWSTLKSRYSGDDAGRKKYVVGKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
IWSTL+SRY GDDAGRKKYVVGKWLQFQM DDKPV++Q+HEYENLVANVLSEGMKMCEILQA+VLLEKFPPS
Subjt: ---------------------IWSTLKSRYSGDDAGRKKYVVGKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
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| A0A5D3C7N0 Ty1-copia retrotransposon protein | 4.2e-43 | 66.22 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYVI---------------------------------WSTLKSRYSGDDAGRKKYVVGKW
MSIK S K+L DLSKLEPLDG NY RWSQKLLIFFEQ EVDYV+ STL+SRY GDDAGRKKYVVGKW
Subjt: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYVI---------------------------------WSTLKSRYSGDDAGRKKYVVGKW
Query: LQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
LQFQM D KPV++Q+HEYENLVANVLSEGMKMCEILQA+VLLEKFPPS
Subjt: LQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
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| A0A5D3E411 Ty1-copia retrotransposon protein | 1.0e-41 | 64.24 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV------------------------------------IWSTLKSRYSGDDAGRKKYVV
MSIK S K+LPDLSKLEPLDG NY RWS+KLLIFFEQ E DYV IWSTL+SRY GDDAGRKKYVV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYCRWSQKLLIFFEQPEVDYV------------------------------------IWSTLKSRYSGDDAGRKKYVV
Query: GKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
GKWLQF+M DDKPV++Q+HEYENLVANVLSEGMKMC+ILQA+VLLEKFP S
Subjt: GKWLQFQMKDDKPVIDQVHEYENLVANVLSEGMKMCEILQADVLLEKFPPS
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