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Tan0021397 (gene) of Snake gourd v1 genome

Gene IDTan0021397
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG04:75849410..75849730
RNA-Seq ExpressionTan0021397
SyntenyTan0021397
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149790.1 probable calcium-binding protein CML28 [Cucumis sativus]6.9e-3491.57Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MAD+GVNSAD ERIFKRFDANGDG+ISATELGDALN FGVSSEDAKRMMDAIDKDGDG++SF+EFFDFAKDNRALMKDFAKAF
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

XP_016902062.1 PREDICTED: polcalcin Bra n 2-like [Cucumis melo]4.8e-3592.77Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MAD+GVNSADCERIFKRFDANGDG+ISATELGDALNGFGVSSEDAKRMMDAIDKDGDG++SF+EF DFAKDNRALMKDFAKAF
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

XP_022948513.1 probable calcium-binding protein CML28 [Cucurbita moschata]3.7e-3592.77Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MADNGV+SA+CERIFKRFDANGDGQISATELGDALNG GVSSEDAKRMMDAIDKDGDGF+SF+EFF+FAKDNRALMKDFAKAF
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

XP_022982739.1 polcalcin Syr v 3-like [Cucurbita maxima]1.3e-2976.14Show/hide
Query:  IKPPEMADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        I+  EMA++ +++A+CERIFKRFDANGDG ISA ELGDALNG GV++E+AKRMMDAIDKDGDGF+S+EEF DF K+NRALMKDFAKAF
Subjt:  IKPPEMADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

XP_038874793.1 probable calcium-binding protein CML28 [Benincasa hispida]1.3e-3287.95Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MA++GV++ADCERIFKRFDANGDG+ISATELGDALNGFGVS+EDAKRMMDAIDKDGDG +SFEEF +FAKDNRALMKDFAKAF
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

TrEMBL top hitse value%identityAlignment
A0A0A0L775 Putative calcium-binding protein CML283.3e-3491.57Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MAD+GVNSAD ERIFKRFDANGDG+ISATELGDALN FGVSSEDAKRMMDAIDKDGDG++SF+EFFDFAKDNRALMKDFAKAF
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

A0A1S4E1G1 polcalcin Bra n 2-like2.3e-3592.77Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MAD+GVNSADCERIFKRFDANGDG+ISATELGDALNGFGVSSEDAKRMMDAIDKDGDG++SF+EF DFAKDNRALMKDFAKAF
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

A0A6J1G9I0 probable calcium-binding protein CML281.8e-3592.77Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MADNGV+SA+CERIFKRFDANGDGQISATELGDALNG GVSSEDAKRMMDAIDKDGDGF+SF+EFF+FAKDNRALMKDFAKAF
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

A0A6J1J5E7 polcalcin Syr v 3-like6.5e-3076.14Show/hide
Query:  IKPPEMADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        I+  EMA++ +++A+CERIFKRFDANGDG ISA ELGDALNG GV++E+AKRMMDAIDKDGDGF+S+EEF DF K+NRALMKDFAKAF
Subjt:  IKPPEMADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

A0A6J1KB11 probable calcium-binding protein CML281.8e-3592.77Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MADNGV+SA+CERIFKRFDANGDGQISATELGDALNG GVSSEDAKRMMDAIDKDGDGF+SF+EFF+FAKDNRALMKDFAKAF
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 35.0e-1960.71Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MAD+    A+ ERIFKRFDANGDG+IS++ELG+ L   G V+ E+ +RMM  ID DGDGF+SFEEF  FA+ NR L+KD AK F
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

P69198 Polcalcin Bra n 27.7e-2061.9Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MAD     A+ +RIFK+FDANGDG+ISA+ELGDAL   G V+ +D KRMM  ID DGDG++S++EF DFA  NR LMKD AK F
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

P69199 Polcalcin Bra r 27.7e-2061.9Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MAD     A+ +RIFK+FDANGDG+ISA+ELGDAL   G V+ +D KRMM  ID DGDG++S++EF DFA  NR LMKD AK F
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

Q8VWY7 Polcalcin Nic t 21.7e-1961.45Show/hide
Query:  ADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        AD+  + AD ERIFKRFDANGDGQISATELG+ L   G V+ E+ K MMD ID + DGF+SF+EF +FA+ NR L++D AK F
Subjt:  ADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

Q9SRP7 Probable calcium-binding protein CML282.6e-2063.1Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MAD     A+ +RIFK+FDANGDG+ISA ELGDAL   G V+ ED KRMM  ID DGDG++S++EF DFA  NR LMKD AK F
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family1.1e-0836.71Show/hide
Query:  DCERIFKRFDANGDGQISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGFLSFEEFFDF---AKDNRALMKDFAKAF
        + E +FK+FD NGDG+IS+ ELG  +   G  V  E+ ++ +  ID+ GDG+++FEEF +      D   ++++   AF
Subjt:  DCERIFKRFDANGDGQISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGFLSFEEFFDF---AKDNRALMKDFAKAF

AT1G73630.1 EF hand calcium-binding protein family1.4e-0838.57Show/hide
Query:  DCERIFKRFDANGDGQISATELGDALNGFGVS--SEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMK
        + +++F +FDANGDG+IS +ELG+     G S   E+  R++D ID D DGF++ EEF    + + + ++
Subjt:  DCERIFKRFDANGDGQISATELGDALNGFGVS--SEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMK

AT2G15680.1 Calcium-binding EF-hand family protein3.1e-0844.29Show/hide
Query:  GVNSADCERIFKRFDANGDGQISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDN
        G+ S+D    F  FD NGDG+ISA E+   L   G   S ED  RM+ A+D DGDG ++ EEF      N
Subjt:  GVNSADCERIFKRFDANGDGQISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDN

AT3G03430.1 Calcium-binding EF-hand family protein1.9e-2163.1Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MAD     A+ +RIFK+FDANGDG+ISA ELGDAL   G V+ ED KRMM  ID DGDG++S++EF DFA  NR LMKD AK F
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF

AT5G17480.1 pollen calcium-binding protein 11.1e-1859.52Show/hide
Query:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF
        MAD     A+ +RIFK+FDANGDG+ISA EL +AL   G V+++D KRMM  ID DGDG +S++EF DFA  NR LMKD AK F
Subjt:  MADNGVNSADCERIFKRFDANGDGQISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACATGAGGAGAAGAGATTTGCCCTAACCAAGATTCCACAATCAAATCAAATCAAACCTCCAGAAATGGCTGACAATGGCGTAAACTCGGCCGATTGCGAGAGGAT
TTTCAAGCGATTCGACGCGAACGGTGACGGGCAGATCTCGGCGACAGAGCTCGGCGATGCGTTGAACGGATTCGGAGTGAGTTCTGAAGATGCGAAGAGGATGATGGACG
CCATTGATAAAGATGGCGATGGCTTCCTTTCGTTCGAAGAGTTCTTCGATTTTGCCAAGGATAATCGCGCTTTGATGAAGGATTTTGCCAAGGCGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACATGAGGAGAAGAGATTTGCCCTAACCAAGATTCCACAATCAAATCAAATCAAACCTCCAGAAATGGCTGACAATGGCGTAAACTCGGCCGATTGCGAGAGGAT
TTTCAAGCGATTCGACGCGAACGGTGACGGGCAGATCTCGGCGACAGAGCTCGGCGATGCGTTGAACGGATTCGGAGTGAGTTCTGAAGATGCGAAGAGGATGATGGACG
CCATTGATAAAGATGGCGATGGCTTCCTTTCGTTCGAAGAGTTCTTCGATTTTGCCAAGGATAATCGCGCTTTGATGAAGGATTTTGCCAAGGCGTTTTAG
Protein sequenceShow/hide protein sequence
MEHEEKRFALTKIPQSNQIKPPEMADNGVNSADCERIFKRFDANGDGQISATELGDALNGFGVSSEDAKRMMDAIDKDGDGFLSFEEFFDFAKDNRALMKDFAKAF